EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000022612 (Gene tree)
Gene ID: 105813218
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 17465 bases
Position: chrKQ022314.1:392729-410193
Accession: 105813218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000021207	HVSL	PF09749.9	8.5e-65	1	1
ENSPCOP00000021208	HVSL	PF09749.9	7.4e-53	1	1
ENSPCOP00000021209	HVSL	PF09749.9	7.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000031867	USB1-201	1785	XM_012647867	ENSPCOP00000021207	265 (aa)	XP_012503321	A0A2K6G4P4
ENSPCOT00000031868	USB1-202	744	-	ENSPCOP00000021208	247 (aa)	-	A0A2K6G4S7
ENSPCOT00000031869	USB1-203	477	-	ENSPCOP00000021209	158 (aa)	-	A0A2K6G4P2

Gene Model

Click here to download ENSPCOG00000022612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000022612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000022612	USB1	100	90.566	ENSG00000103005	USB1	100	91.589	Homo_sapiens
ENSPCOG00000022612	USB1	98	46.953	ENSAPOG00000011942	usb1	81	51.982	Acanthochromis_polyacanthus
ENSPCOG00000022612	USB1	100	86.245	ENSAMEG00000017205	USB1	100	86.245	Ailuropoda_melanoleuca
ENSPCOG00000022612	USB1	85	53.540	ENSACIG00000012234	usb1	83	53.540	Amphilophus_citrinellus
ENSPCOG00000022612	USB1	86	52.863	ENSAOCG00000014831	usb1	80	52.863	Amphiprion_ocellaris
ENSPCOG00000022612	USB1	86	53.304	ENSAPEG00000000296	usb1	80	53.304	Amphiprion_percula
ENSPCOG00000022612	USB1	95	49.402	ENSATEG00000009348	usb1	82	51.948	Anabas_testudineus
ENSPCOG00000022612	USB1	85	68.584	ENSAPLG00000002756	USB1	100	69.027	Anas_platyrhynchos
ENSPCOG00000022612	USB1	86	63.319	ENSACAG00000015481	USB1	100	63.319	Anolis_carolinensis
ENSPCOG00000022612	USB1	100	91.139	ENSANAG00000035640	USB1	100	91.139	Aotus_nancymaae
ENSPCOG00000022612	USB1	85	53.125	ENSACLG00000020586	usb1	79	53.125	Astatotilapia_calliptera
ENSPCOG00000022612	USB1	85	50.667	ENSAMXG00000040146	usb1	75	50.667	Astyanax_mexicanus
ENSPCOG00000022612	USB1	100	84.151	ENSBTAG00000015758	USB1	100	84.151	Bos_taurus
ENSPCOG00000022612	USB1	100	91.139	ENSCJAG00000011733	USB1	100	91.139	Callithrix_jacchus
ENSPCOG00000022612	USB1	99	83.088	ENSCAFG00000008556	USB1	73	81.985	Canis_familiaris
ENSPCOG00000022612	USB1	99	84.211	ENSCAFG00020009263	USB1	99	79.487	Canis_lupus_dingo
ENSPCOG00000022612	USB1	100	83.019	ENSCHIG00000024290	USB1	100	83.019	Capra_hircus
ENSPCOG00000022612	USB1	100	92.075	ENSTSYG00000006997	USB1	100	92.075	Carlito_syrichta
ENSPCOG00000022612	USB1	75	85.593	ENSCAPG00000009057	USB1	100	72.897	Cavia_aperea
ENSPCOG00000022612	USB1	100	83.582	ENSCPOG00000014325	USB1	100	83.582	Cavia_porcellus
ENSPCOG00000022612	USB1	100	90.566	ENSCCAG00000022132	USB1	100	90.566	Cebus_capucinus
ENSPCOG00000022612	USB1	100	93.671	ENSCATG00000032174	USB1	100	93.671	Cercocebus_atys
ENSPCOG00000022612	USB1	66	88.636	ENSCLAG00000007363	USB1	100	88.636	Chinchilla_lanigera
ENSPCOG00000022612	USB1	100	92.075	ENSCSAG00000004783	USB1	100	92.075	Chlorocebus_sabaeus
ENSPCOG00000022612	USB1	92	65.714	ENSCPBG00000026943	USB1	100	62.230	Chrysemys_picta_bellii
ENSPCOG00000022612	USB1	84	31.381	ENSCING00000011490	-	86	31.381	Ciona_intestinalis
ENSPCOG00000022612	USB1	83	31.278	ENSCSAVG00000000894	-	81	31.278	Ciona_savignyi
ENSPCOG00000022612	USB1	100	90.943	ENSCANG00000037135	USB1	100	90.943	Colobus_angolensis_palliatus
ENSPCOG00000022612	USB1	100	84.328	ENSCGRG00001011243	USB1	100	83.955	Cricetulus_griseus_chok1gshd
ENSPCOG00000022612	USB1	100	84.328	ENSCGRG00000013252	USB1	100	83.955	Cricetulus_griseus_crigri
ENSPCOG00000022612	USB1	99	47.529	ENSCSEG00000013881	usb1	86	49.180	Cynoglossus_semilaevis
ENSPCOG00000022612	USB1	85	50.000	ENSCVAG00000009252	usb1	97	50.439	Cyprinodon_variegatus
ENSPCOG00000022612	USB1	90	48.536	ENSDARG00000003841	usb1	87	48.536	Danio_rerio
ENSPCOG00000022612	USB1	100	82.264	ENSDORG00000001888	Usb1	100	82.264	Dipodomys_ordii
ENSPCOG00000022612	USB1	78	39.252	FBgn0037713	CG16790	79	39.252	Drosophila_melanogaster
ENSPCOG00000022612	USB1	96	75.163	ENSETEG00000019682	USB1	100	70.037	Echinops_telfairi
ENSPCOG00000022612	USB1	84	50.000	ENSEBUG00000005889	usb1	78	50.000	Eptatretus_burgeri
ENSPCOG00000022612	USB1	100	87.170	ENSEASG00005005484	USB1	100	87.170	Equus_asinus_asinus
ENSPCOG00000022612	USB1	100	86.792	ENSECAG00000019493	USB1	91	86.792	Equus_caballus
ENSPCOG00000022612	USB1	66	79.545	ENSEEUG00000000154	USB1	100	61.132	Erinaceus_europaeus
ENSPCOG00000022612	USB1	86	49.123	ENSELUG00000010974	usb1	84	49.123	Esox_lucius
ENSPCOG00000022612	USB1	100	87.640	ENSFCAG00000002693	USB1	100	87.640	Felis_catus
ENSPCOG00000022612	USB1	85	65.625	ENSFALG00000006876	USB1	99	60.886	Ficedula_albicollis
ENSPCOG00000022612	USB1	100	86.142	ENSFDAG00000010052	USB1	100	86.142	Fukomys_damarensis
ENSPCOG00000022612	USB1	92	44.785	ENSFHEG00000012334	usb1	72	55.000	Fundulus_heteroclitus
ENSPCOG00000022612	USB1	84	51.121	ENSGMOG00000004228	usb1	99	51.121	Gadus_morhua
ENSPCOG00000022612	USB1	84	67.857	ENSGALG00000035604	USB1	100	63.910	Gallus_gallus
ENSPCOG00000022612	USB1	98	48.727	ENSGAFG00000021890	usb1	82	51.754	Gambusia_affinis
ENSPCOG00000022612	USB1	85	52.232	ENSGACG00000003257	usb1	81	52.232	Gasterosteus_aculeatus
ENSPCOG00000022612	USB1	100	63.139	ENSGAGG00000022572	USB1	100	60.806	Gopherus_agassizii
ENSPCOG00000022612	USB1	100	91.321	ENSGGOG00000017147	USB1	100	91.321	Gorilla_gorilla
ENSPCOG00000022612	USB1	86	53.304	ENSHBUG00000009823	usb1	81	53.304	Haplochromis_burtoni
ENSPCOG00000022612	USB1	100	86.517	ENSHGLG00000016078	USB1	98	86.517	Heterocephalus_glaber_female
ENSPCOG00000022612	USB1	100	86.517	ENSHGLG00100005562	USB1	98	86.517	Heterocephalus_glaber_male
ENSPCOG00000022612	USB1	98	50.965	ENSHCOG00000015633	usb1	99	50.965	Hippocampus_comes
ENSPCOG00000022612	USB1	96	44.531	ENSIPUG00000008601	usb1	78	53.125	Ictalurus_punctatus
ENSPCOG00000022612	USB1	100	86.447	ENSSTOG00000007548	USB1	100	86.447	Ictidomys_tridecemlineatus
ENSPCOG00000022612	USB1	100	87.266	ENSJJAG00000021859	Usb1	100	87.266	Jaculus_jaculus
ENSPCOG00000022612	USB1	86	51.542	ENSKMAG00000007200	usb1	80	51.542	Kryptolebias_marmoratus
ENSPCOG00000022612	USB1	75	51.256	ENSLBEG00000008452	usb1	64	52.105	Labrus_bergylta
ENSPCOG00000022612	USB1	78	61.244	ENSLACG00000000105	USB1	72	61.722	Latimeria_chalumnae
ENSPCOG00000022612	USB1	95	53.755	ENSLOCG00000000465	usb1	85	55.187	Lepisosteus_oculatus
ENSPCOG00000022612	USB1	100	65.556	ENSLAFG00000002267	USB1	100	64.493	Loxodonta_africana
ENSPCOG00000022612	USB1	100	94.304	ENSMFAG00000003926	USB1	100	94.304	Macaca_fascicularis
ENSPCOG00000022612	USB1	100	91.698	ENSMMUG00000022669	USB1	100	91.698	Macaca_mulatta
ENSPCOG00000022612	USB1	100	94.304	ENSMNEG00000042487	USB1	100	94.304	Macaca_nemestrina
ENSPCOG00000022612	USB1	100	94.304	ENSMLEG00000028756	USB1	100	94.304	Mandrillus_leucophaeus
ENSPCOG00000022612	USB1	98	48.029	ENSMAMG00000015092	usb1	83	51.502	Mastacembelus_armatus
ENSPCOG00000022612	USB1	85	53.125	ENSMZEG00005010008	usb1	99	48.746	Maylandia_zebra
ENSPCOG00000022612	USB1	100	83.895	ENSMAUG00000007832	Usb1	100	83.895	Mesocricetus_auratus
ENSPCOG00000022612	USB1	100	95.094	ENSMICG00000004900	USB1	100	95.094	Microcebus_murinus
ENSPCOG00000022612	USB1	100	84.644	ENSMOCG00000022647	Usb1	100	84.644	Microtus_ochrogaster
ENSPCOG00000022612	USB1	86	52.632	ENSMMOG00000000490	usb1	88	52.632	Mola_mola
ENSPCOG00000022612	USB1	100	66.052	ENSMODG00000014067	USB1	100	64.234	Monodelphis_domestica
ENSPCOG00000022612	USB1	95	50.199	ENSMALG00000005930	usb1	80	53.744	Monopterus_albus
ENSPCOG00000022612	USB1	100	81.273	MGP_CAROLIEiJ_G0031421	Usb1	100	84.956	Mus_caroli
ENSPCOG00000022612	USB1	100	81.273	ENSMUSG00000031792	Usb1	100	85.841	Mus_musculus
ENSPCOG00000022612	USB1	100	82.022	MGP_PahariEiJ_G0023019	Usb1	100	86.325	Mus_pahari
ENSPCOG00000022612	USB1	100	80.899	MGP_SPRETEiJ_G0032540	Usb1	100	80.150	Mus_spretus
ENSPCOG00000022612	USB1	100	84.387	ENSMPUG00000004684	USB1	96	83.643	Mustela_putorius_furo
ENSPCOG00000022612	USB1	87	90.476	ENSMLUG00000007400	USB1	100	90.476	Myotis_lucifugus
ENSPCOG00000022612	USB1	100	84.387	ENSNGAG00000009703	Usb1	100	84.387	Nannospalax_galili
ENSPCOG00000022612	USB1	87	51.163	ENSNBRG00000008747	usb1	99	52.970	Neolamprologus_brichardi
ENSPCOG00000022612	USB1	100	89.873	ENSNLEG00000003340	USB1	99	91.165	Nomascus_leucogenys
ENSPCOG00000022612	USB1	94	58.333	ENSMEUG00000003328	-	100	58.333	Notamacropus_eugenii
ENSPCOG00000022612	USB1	75	79.661	ENSOPRG00000011803	USB1	72	88.235	Ochotona_princeps
ENSPCOG00000022612	USB1	100	82.397	ENSODEG00000016214	USB1	100	82.397	Octodon_degus
ENSPCOG00000022612	USB1	98	48.746	ENSONIG00000011063	usb1	81	52.863	Oreochromis_niloticus
ENSPCOG00000022612	USB1	85	72.889	ENSOANG00000012118	USB1	94	72.889	Ornithorhynchus_anatinus
ENSPCOG00000022612	USB1	94	44.177	ENSORLG00000012479	usb1	82	50.446	Oryzias_latipes
ENSPCOG00000022612	USB1	93	45.914	ENSORLG00020018671	usb1	99	47.037	Oryzias_latipes_hni
ENSPCOG00000022612	USB1	93	45.914	ENSORLG00015009679	usb1	94	46.094	Oryzias_latipes_hsok
ENSPCOG00000022612	USB1	85	50.893	ENSOMEG00000012930	usb1	81	50.893	Oryzias_melastigma
ENSPCOG00000022612	USB1	100	91.903	ENSOGAG00000003273	USB1	100	91.903	Otolemur_garnettii
ENSPCOG00000022612	USB1	95	81.423	ENSOARG00000001107	USB1	94	82.927	Ovis_aries
ENSPCOG00000022612	USB1	100	91.139	ENSPPAG00000042137	USB1	100	91.139	Pan_paniscus
ENSPCOG00000022612	USB1	100	87.640	ENSPPRG00000024797	USB1	100	87.640	Panthera_pardus
ENSPCOG00000022612	USB1	100	88.015	ENSPTIG00000007506	USB1	100	88.015	Panthera_tigris_altaica
ENSPCOG00000022612	USB1	100	90.283	ENSPTRG00000008172	USB1	100	92.523	Pan_troglodytes
ENSPCOG00000022612	USB1	100	94.304	ENSPANG00000025138	USB1	100	94.304	Papio_anubis
ENSPCOG00000022612	USB1	96	52.549	ENSPKIG00000015109	usb1	82	53.086	Paramormyrops_kingsleyae
ENSPCOG00000022612	USB1	85	52.889	ENSPSIG00000004305	USB1	100	52.915	Pelodiscus_sinensis
ENSPCOG00000022612	USB1	85	51.111	ENSPMGG00000017725	usb1	86	51.111	Periophthalmus_magnuspinnatus
ENSPCOG00000022612	USB1	100	82.721	ENSPEMG00000016183	Usb1	100	82.721	Peromyscus_maniculatus_bairdii
ENSPCOG00000022612	USB1	88	50.213	ENSPMAG00000000462	usb1	99	50.213	Petromyzon_marinus
ENSPCOG00000022612	USB1	98	47.653	ENSPFOG00000011130	usb1	82	51.316	Poecilia_formosa
ENSPCOG00000022612	USB1	98	47.653	ENSPLAG00000009820	usb1	82	51.316	Poecilia_latipinna
ENSPCOG00000022612	USB1	98	46.931	ENSPMEG00000006402	usb1	82	51.316	Poecilia_mexicana
ENSPCOG00000022612	USB1	92	45.062	ENSPREG00000001047	usb1	78	53.093	Poecilia_reticulata
ENSPCOG00000022612	USB1	96	86.842	ENSPPYG00000007401	USB1	100	87.698	Pongo_abelii
ENSPCOG00000022612	USB1	100	83.019	ENSPVAG00000004613	USB1	100	83.019	Pteropus_vampyrus
ENSPCOG00000022612	USB1	86	53.304	ENSPNYG00000022262	usb1	81	53.304	Pundamilia_nyererei
ENSPCOG00000022612	USB1	98	44.369	ENSPNAG00000011736	usb1	99	45.051	Pygocentrus_nattereri
ENSPCOG00000022612	USB1	100	83.895	ENSRNOG00000013216	Usb1	100	83.146	Rattus_norvegicus
ENSPCOG00000022612	USB1	100	93.671	ENSRBIG00000044466	USB1	100	93.671	Rhinopithecus_bieti
ENSPCOG00000022612	USB1	100	93.671	ENSRROG00000029211	USB1	100	93.671	Rhinopithecus_roxellana
ENSPCOG00000022612	USB1	100	89.434	ENSSBOG00000029362	USB1	100	89.434	Saimiri_boliviensis_boliviensis
ENSPCOG00000022612	USB1	83	73.516	ENSSHAG00000006993	USB1	97	69.796	Sarcophilus_harrisii
ENSPCOG00000022612	USB1	87	57.143	ENSSFOG00015023663	usb1	73	57.143	Scleropages_formosus
ENSPCOG00000022612	USB1	98	46.763	ENSSMAG00000015834	usb1	83	49.798	Scophthalmus_maximus
ENSPCOG00000022612	USB1	85	54.425	ENSSDUG00000002949	usb1	92	49.664	Seriola_dumerili
ENSPCOG00000022612	USB1	85	54.464	ENSSLDG00000014174	usb1	80	54.464	Seriola_lalandi_dorsalis
ENSPCOG00000022612	USB1	81	68.224	ENSSPUG00000006741	USB1	100	68.224	Sphenodon_punctatus
ENSPCOG00000022612	USB1	98	45.139	ENSSPAG00000007484	usb1	80	51.542	Stegastes_partitus
ENSPCOG00000022612	USB1	100	84.015	ENSSSCG00000002807	USB1	100	82.528	Sus_scrofa
ENSPCOG00000022612	USB1	80	67.453	ENSTGUG00000004792	USB1	87	66.216	Taeniopygia_guttata
ENSPCOG00000022612	USB1	98	48.699	ENSTRUG00000021069	usb1	86	49.356	Takifugu_rubripes
ENSPCOG00000022612	USB1	98	47.148	ENSTNIG00000000626	usb1	98	46.768	Tetraodon_nigroviridis
ENSPCOG00000022612	USB1	88	59.914	ENSTBEG00000001507	USB1	100	59.914	Tupaia_belangeri
ENSPCOG00000022612	USB1	100	85.874	ENSUAMG00000016823	USB1	100	86.245	Ursus_americanus
ENSPCOG00000022612	USB1	81	88.785	ENSUMAG00000021369	USB1	100	88.785	Ursus_maritimus
ENSPCOG00000022612	USB1	96	51.656	ENSVPAG00000009834	-	59	89.167	Vicugna_pacos
ENSPCOG00000022612	USB1	99	83.955	ENSVVUG00000023700	USB1	93	85.477	Vulpes_vulpes
ENSPCOG00000022612	USB1	82	56.422	ENSXETG00000013795	usb1	97	53.498	Xenopus_tropicalis
ENSPCOG00000022612	USB1	86	52.193	ENSXMAG00000024687	usb1	67	52.193	Xiphophorus_maculatus