EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000023406 (Gene tree)
Gene ID: 105810309
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 67617 bases
Position: chrKQ021614.1:361231-428847
Accession: 105810309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000022602	zf-C2H2	PF00096.26	9.2e-25	1	3
ENSPCOP00000022602	zf-C2H2	PF00096.26	9.2e-25	2	3
ENSPCOP00000022602	zf-C2H2	PF00096.26	9.2e-25	3	3
ENSPCOP00000022600	zf-C2H2	PF00096.26	9.6e-25	1	3
ENSPCOP00000022600	zf-C2H2	PF00096.26	9.6e-25	2	3
ENSPCOP00000022600	zf-C2H2	PF00096.26	9.6e-25	3	3
ENSPCOP00000022602	zf-met	PF12874.7	5e-06	1	2
ENSPCOP00000022602	zf-met	PF12874.7	5e-06	2	2
ENSPCOP00000022600	zf-met	PF12874.7	5.1e-06	1	2
ENSPCOP00000022600	zf-met	PF12874.7	5.1e-06	2	2
ENSPCOP00000022602	zf-C2H2_jaz	PF12171.8	4e-12	1	1
ENSPCOP00000022600	zf-C2H2_jaz	PF12171.8	4.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000033273	PRDM10-201	3186	XM_012644271	ENSPCOP00000022600	1061 (aa)	XP_012499725	A0A2K6G8N0
ENSPCOT00000033275	PRDM10-202	3174	-	ENSPCOP00000022602	1057 (aa)	-	A0A2K6G8P8

Gene Model

Click here to download ENSPCOG00000023406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000023406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000023406	PRDM10	51	34.197	ENSPCOG00000022828	PRDM5	68	35.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000023406	PRDM10	100	82.631	ENSG00000170325	PRDM10	100	82.631	Homo_sapiens
ENSPCOG00000023406	PRDM10	100	78.816	ENSAMEG00000002425	PRDM10	100	77.205	Ailuropoda_melanoleuca
ENSPCOG00000023406	PRDM10	100	71.883	ENSAPLG00000004858	PRDM10	100	71.969	Anas_platyrhynchos
ENSPCOG00000023406	PRDM10	100	96.331	ENSANAG00000022064	PRDM10	100	96.331	Aotus_nancymaae
ENSPCOG00000023406	PRDM10	95	88.727	ENSBTAG00000019001	PRDM10	100	94.118	Bos_taurus
ENSPCOG00000023406	PRDM10	100	82.530	ENSCJAG00000009235	PRDM10	100	81.888	Callithrix_jacchus
ENSPCOG00000023406	PRDM10	100	80.207	ENSCAFG00000010164	PRDM10	100	79.138	Canis_familiaris
ENSPCOG00000023406	PRDM10	91	96.203	ENSCAFG00020010152	PRDM10	96	96.203	Canis_lupus_dingo
ENSPCOG00000023406	PRDM10	100	80.640	ENSCHIG00000026530	PRDM10	100	86.957	Capra_hircus
ENSPCOG00000023406	PRDM10	100	83.319	ENSTSYG00000000544	PRDM10	100	82.504	Carlito_syrichta
ENSPCOG00000023406	PRDM10	100	81.311	ENSCAPG00000017296	PRDM10	100	80.691	Cavia_aperea
ENSPCOG00000023406	PRDM10	99	72.300	ENSCPOG00000000389	PRDM10	98	80.655	Cavia_porcellus
ENSPCOG00000023406	PRDM10	100	82.530	ENSCCAG00000024567	PRDM10	100	81.888	Cebus_capucinus
ENSPCOG00000023406	PRDM10	100	83.405	ENSCATG00000040031	PRDM10	100	82.672	Cercocebus_atys
ENSPCOG00000023406	PRDM10	100	78.034	ENSCLAG00000014605	PRDM10	99	98.701	Chinchilla_lanigera
ENSPCOG00000023406	PRDM10	100	83.665	ENSCSAG00000002202	PRDM10	100	82.931	Chlorocebus_sabaeus
ENSPCOG00000023406	PRDM10	100	69.760	ENSCPBG00000026880	PRDM10	98	72.077	Chrysemys_picta_bellii
ENSPCOG00000023406	PRDM10	100	82.960	ENSCANG00000032669	PRDM10	100	83.305	Colobus_angolensis_palliatus
ENSPCOG00000023406	PRDM10	100	79.741	ENSCGRG00001021647	Prdm10	98	79.483	Cricetulus_griseus_chok1gshd
ENSPCOG00000023406	PRDM10	100	79.741	ENSCGRG00000006562	Prdm10	98	79.483	Cricetulus_griseus_crigri
ENSPCOG00000023406	PRDM10	81	77.918	ENSDNOG00000001366	PRDM10	95	77.918	Dasypus_novemcinctus
ENSPCOG00000023406	PRDM10	100	80.812	ENSDORG00000014292	Prdm10	100	79.706	Dipodomys_ordii
ENSPCOG00000023406	PRDM10	91	97.403	ENSEASG00005022914	PRDM10	98	97.403	Equus_asinus_asinus
ENSPCOG00000023406	PRDM10	91	97.403	ENSECAG00000011499	PRDM10	98	97.403	Equus_caballus
ENSPCOG00000023406	PRDM10	98	80.793	ENSFCAG00000004111	PRDM10	96	80.352	Felis_catus
ENSPCOG00000023406	PRDM10	100	68.360	ENSFALG00000004873	PRDM10	100	68.027	Ficedula_albicollis
ENSPCOG00000023406	PRDM10	100	78.481	ENSFDAG00000017311	PRDM10	97	94.937	Fukomys_damarensis
ENSPCOG00000023406	PRDM10	100	69.410	ENSGALG00000033660	PRDM10	99	71.467	Gallus_gallus
ENSPCOG00000023406	PRDM10	91	67.901	ENSGACG00000012293	prdm10	98	67.901	Gasterosteus_aculeatus
ENSPCOG00000023406	PRDM10	100	71.233	ENSGAGG00000012523	PRDM10	99	71.062	Gopherus_agassizii
ENSPCOG00000023406	PRDM10	100	83.076	ENSGGOG00000015359	PRDM10	100	82.348	Gorilla_gorilla
ENSPCOG00000023406	PRDM10	100	78.335	ENSHGLG00000001106	PRDM10	100	78.420	Heterocephalus_glaber_female
ENSPCOG00000023406	PRDM10	100	78.383	ENSHGLG00100002350	PRDM10	100	78.468	Heterocephalus_glaber_male
ENSPCOG00000023406	PRDM10	100	82.297	ENSSTOG00000002015	PRDM10	100	81.740	Ictidomys_tridecemlineatus
ENSPCOG00000023406	PRDM10	80	76.495	ENSJJAG00000021493	Prdm10	100	63.969	Jaculus_jaculus
ENSPCOG00000023406	PRDM10	100	78.302	ENSLAFG00000031867	PRDM10	100	78.232	Loxodonta_africana
ENSPCOG00000023406	PRDM10	100	83.549	ENSMFAG00000031008	PRDM10	100	83.549	Macaca_fascicularis
ENSPCOG00000023406	PRDM10	100	83.549	ENSMMUG00000017555	PRDM10	100	83.549	Macaca_mulatta
ENSPCOG00000023406	PRDM10	100	83.463	ENSMNEG00000036493	PRDM10	100	83.463	Macaca_nemestrina
ENSPCOG00000023406	PRDM10	94	97.647	ENSMLEG00000042028	PRDM10	99	98.734	Mandrillus_leucophaeus
ENSPCOG00000023406	PRDM10	100	69.333	ENSMGAG00000001112	PRDM10	100	69.333	Meleagris_gallopavo
ENSPCOG00000023406	PRDM10	100	84.927	ENSMICG00000013888	PRDM10	100	84.192	Microcebus_murinus
ENSPCOG00000023406	PRDM10	100	77.580	ENSMOCG00000021853	Prdm10	99	97.260	Microtus_ochrogaster
ENSPCOG00000023406	PRDM10	73	70.169	ENSMODG00000004979	PRDM10	99	68.510	Monodelphis_domestica
ENSPCOG00000023406	PRDM10	100	78.171	ENSMUSG00000042496	Prdm10	100	84.868	Mus_musculus
ENSPCOG00000023406	PRDM10	100	80.052	MGP_SPRETEiJ_G0033061	-	100	78.988	Mus_spretus
ENSPCOG00000023406	PRDM10	100	81.763	ENSMPUG00000008711	PRDM10	99	80.603	Mustela_putorius_furo
ENSPCOG00000023406	PRDM10	100	80.189	ENSMLUG00000013051	PRDM10	100	79.673	Myotis_lucifugus
ENSPCOG00000023406	PRDM10	100	81.590	ENSNGAG00000000580	Prdm10	100	81.417	Nannospalax_galili
ENSPCOG00000023406	PRDM10	100	83.549	ENSNLEG00000007488	PRDM10	100	82.818	Nomascus_leucogenys
ENSPCOG00000023406	PRDM10	91	96.104	ENSODEG00000005309	PRDM10	99	96.104	Octodon_degus
ENSPCOG00000023406	PRDM10	100	67.064	ENSOANG00000000577	-	100	65.617	Ornithorhynchus_anatinus
ENSPCOG00000023406	PRDM10	100	80.620	ENSOCUG00000003736	PRDM10	100	87.335	Oryctolagus_cuniculus
ENSPCOG00000023406	PRDM10	100	82.601	ENSOGAG00000010723	PRDM10	100	87.533	Otolemur_garnettii
ENSPCOG00000023406	PRDM10	100	80.640	ENSOARG00000014507	PRDM10	100	87.088	Ovis_aries
ENSPCOG00000023406	PRDM10	100	82.904	ENSPPAG00000042881	PRDM10	100	82.845	Pan_paniscus
ENSPCOG00000023406	PRDM10	100	81.223	ENSPPRG00000007002	PRDM10	100	80.792	Panthera_pardus
ENSPCOG00000023406	PRDM10	100	81.137	ENSPTIG00000013331	PRDM10	100	80.640	Panthera_tigris_altaica
ENSPCOG00000023406	PRDM10	100	82.904	ENSPTRG00000004477	PRDM10	100	82.904	Pan_troglodytes
ENSPCOG00000023406	PRDM10	100	83.463	ENSPANG00000017470	PRDM10	100	88.259	Papio_anubis
ENSPCOG00000023406	PRDM10	100	77.957	ENSPEMG00000014985	Prdm10	100	73.492	Peromyscus_maniculatus_bairdii
ENSPCOG00000023406	PRDM10	100	83.003	ENSPPYG00000004061	PRDM10	100	82.272	Pongo_abelii
ENSPCOG00000023406	PRDM10	92	75.899	ENSPCAG00000014514	PRDM10	100	76.023	Procavia_capensis
ENSPCOG00000023406	PRDM10	100	81.826	ENSPVAG00000012764	PRDM10	100	81.309	Pteropus_vampyrus
ENSPCOG00000023406	PRDM10	100	80.155	ENSRNOG00000007853	Prdm10	100	79.088	Rattus_norvegicus
ENSPCOG00000023406	PRDM10	100	82.889	ENSRBIG00000030924	PRDM10	100	82.545	Rhinopithecus_bieti
ENSPCOG00000023406	PRDM10	100	82.889	ENSRROG00000034334	PRDM10	100	82.545	Rhinopithecus_roxellana
ENSPCOG00000023406	PRDM10	100	82.459	ENSSBOG00000008773	PRDM10	100	82.459	Saimiri_boliviensis_boliviensis
ENSPCOG00000023406	PRDM10	99	73.883	ENSSHAG00000004503	PRDM10	99	73.265	Sarcophilus_harrisii
ENSPCOG00000023406	PRDM10	74	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSPCOG00000023406	PRDM10	100	66.667	ENSSPUG00000001178	PRDM10	99	63.784	Sphenodon_punctatus
ENSPCOG00000023406	PRDM10	100	79.931	ENSSSCG00000015243	PRDM10	100	78.265	Sus_scrofa
ENSPCOG00000023406	PRDM10	100	70.669	ENSTGUG00000000530	PRDM10	100	70.497	Taeniopygia_guttata
ENSPCOG00000023406	PRDM10	94	96.018	ENSTBEG00000007221	PRDM10	94	96.018	Tupaia_belangeri
ENSPCOG00000023406	PRDM10	100	78.208	ENSTTRG00000009189	PRDM10	100	76.632	Tursiops_truncatus
ENSPCOG00000023406	PRDM10	93	76.103	ENSUAMG00000018832	PRDM10	96	86.939	Ursus_americanus
ENSPCOG00000023406	PRDM10	100	79.846	ENSUMAG00000003167	PRDM10	100	86.675	Ursus_maritimus
ENSPCOG00000023406	PRDM10	100	81.245	ENSVVUG00000019878	PRDM10	100	80.172	Vulpes_vulpes
ENSPCOG00000023406	PRDM10	100	58.048	ENSXETG00000032173	PRDM10	100	54.070	Xenopus_tropicalis