EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000023451 (Gene tree)
Gene ID: 105810514
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 61409 bases
Position: chrKQ021659.1:339488-400896
Accession: 105810514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000022677	RRM_1	PF00076.22	9.6e-39	1	3
ENSPCOP00000022677	RRM_1	PF00076.22	9.6e-39	2	3
ENSPCOP00000022677	RRM_1	PF00076.22	9.6e-39	3	3
ENSPCOP00000022676	RRM_1	PF00076.22	1.5e-38	1	3
ENSPCOP00000022676	RRM_1	PF00076.22	1.5e-38	2	3
ENSPCOP00000022676	RRM_1	PF00076.22	1.5e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000033350	RBM47-201	4441	XM_012644509	ENSPCOP00000022676	586 (aa)	XP_012499963	A0A2K6G8Z4
ENSPCOT00000033351	RBM47-202	4234	XM_012644512	ENSPCOP00000022677	517 (aa)	XP_012499966	A0A2K6G8Y0

Gene Model

Click here to download ENSPCOG00000023451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000023451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000023451	RBM47	58	55.814	ENSPCOG00000016516	SYNCRIP	79	47.085
ENSPCOG00000023451	RBM47	58	71.333	ENSPCOG00000024347	RBM46	64	71.333
ENSPCOG00000023451	RBM47	60	72.903	ENSPCOG00000024172	A1CF	73	59.641

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000023451	RBM47	100	93.098	ENSG00000163694	RBM47	100	93.885	Homo_sapiens
ENSPCOG00000023451	RBM47	100	83.245	ENSAPOG00000011062	rbm47	100	81.117	Acanthochromis_polyacanthus
ENSPCOG00000023451	RBM47	100	93.600	ENSAMEG00000009672	RBM47	100	92.761	Ailuropoda_melanoleuca
ENSPCOG00000023451	RBM47	100	83.511	ENSACIG00000011531	rbm47	100	81.383	Amphilophus_citrinellus
ENSPCOG00000023451	RBM47	100	83.245	ENSAOCG00000022245	rbm47	100	81.117	Amphiprion_ocellaris
ENSPCOG00000023451	RBM47	100	83.245	ENSAPEG00000018304	rbm47	100	81.117	Amphiprion_percula
ENSPCOG00000023451	RBM47	100	80.977	ENSATEG00000018400	rbm47	94	84.986	Anabas_testudineus
ENSPCOG00000023451	RBM47	100	85.279	ENSAPLG00000013974	RBM47	100	84.772	Anas_platyrhynchos
ENSPCOG00000023451	RBM47	100	82.638	ENSACAG00000011833	RBM47	100	82.304	Anolis_carolinensis
ENSPCOG00000023451	RBM47	100	92.593	ENSANAG00000029440	RBM47	100	92.088	Aotus_nancymaae
ENSPCOG00000023451	RBM47	100	81.395	ENSACLG00000016902	rbm47	94	84.986	Astatotilapia_calliptera
ENSPCOG00000023451	RBM47	100	78.866	ENSAMXG00000021794	rbm47	94	82.303	Astyanax_mexicanus
ENSPCOG00000023451	RBM47	100	92.217	ENSBTAG00000002356	RBM47	100	92.217	Bos_taurus
ENSPCOG00000023451	RBM47	100	92.542	ENSCJAG00000019385	RBM47	100	91.933	Callithrix_jacchus
ENSPCOG00000023451	RBM47	96	94.718	ENSCAFG00000015898	RBM47	100	93.243	Canis_familiaris
ENSPCOG00000023451	RBM47	83	95.714	ENSCAFG00020010558	RBM47	94	94.157	Canis_lupus_dingo
ENSPCOG00000023451	RBM47	100	92.555	ENSCHIG00000026214	RBM47	100	92.386	Capra_hircus
ENSPCOG00000023451	RBM47	86	80.473	ENSTSYG00000033612	RBM47	92	91.150	Carlito_syrichta
ENSPCOG00000023451	RBM47	100	85.473	ENSCAPG00000008426	RBM47	100	85.642	Cavia_aperea
ENSPCOG00000023451	RBM47	100	93.067	ENSCPOG00000014100	RBM47	100	91.554	Cavia_porcellus
ENSPCOG00000023451	RBM47	100	92.373	ENSCCAG00000030129	-	100	91.765	Cebus_capucinus
ENSPCOG00000023451	RBM47	99	65.424	ENSCCAG00000024397	-	99	64.068	Cebus_capucinus
ENSPCOG00000023451	RBM47	100	93.718	ENSCATG00000042064	RBM47	100	93.039	Cercocebus_atys
ENSPCOG00000023451	RBM47	100	93.067	ENSCLAG00000001684	RBM47	100	91.709	Chinchilla_lanigera
ENSPCOG00000023451	RBM47	100	93.266	ENSCSAG00000017060	RBM47	100	92.761	Chlorocebus_sabaeus
ENSPCOG00000023451	RBM47	89	91.139	ENSCHOG00000011731	RBM47	88	87.342	Choloepus_hoffmanni
ENSPCOG00000023451	RBM47	100	87.766	ENSCPBG00000013831	RBM47	100	85.570	Chrysemys_picta_bellii
ENSPCOG00000023451	RBM47	100	93.548	ENSCANG00000019997	RBM47	100	92.869	Colobus_angolensis_palliatus
ENSPCOG00000023451	RBM47	100	89.683	ENSCGRG00001000623	-	100	89.226	Cricetulus_griseus_chok1gshd
ENSPCOG00000023451	RBM47	100	85.057	ENSCGRG00001020102	-	100	85.057	Cricetulus_griseus_chok1gshd
ENSPCOG00000023451	RBM47	100	88.552	ENSCGRG00000007762	-	100	88.384	Cricetulus_griseus_crigri
ENSPCOG00000023451	RBM47	100	84.674	ENSCGRG00000014760	-	96	86.800	Cricetulus_griseus_crigri
ENSPCOG00000023451	RBM47	100	74.286	ENSCSEG00000004545	rbm47	100	78.836	Cynoglossus_semilaevis
ENSPCOG00000023451	RBM47	96	84.136	ENSCVAG00000020144	rbm47	100	74.368	Cyprinodon_variegatus
ENSPCOG00000023451	RBM47	100	76.033	ENSDARG00000061985	rbm47	94	82.548	Danio_rerio
ENSPCOG00000023451	RBM47	100	91.002	ENSDNOG00000046854	RBM47	100	91.171	Dasypus_novemcinctus
ENSPCOG00000023451	RBM47	100	91.457	ENSDORG00000010144	Rbm47	100	90.787	Dipodomys_ordii
ENSPCOG00000023451	RBM47	100	90.420	ENSETEG00000009194	RBM47	100	89.916	Echinops_telfairi
ENSPCOG00000023451	RBM47	99	58.236	ENSEBUG00000011912	rbm47	95	60.035	Eptatretus_burgeri
ENSPCOG00000023451	RBM47	100	92.386	ENSEASG00005008443	RBM47	100	92.724	Equus_asinus_asinus
ENSPCOG00000023451	RBM47	100	92.386	ENSECAG00000004400	RBM47	100	92.724	Equus_caballus
ENSPCOG00000023451	RBM47	75	92.019	ENSEEUG00000001194	RBM47	75	92.641	Erinaceus_europaeus
ENSPCOG00000023451	RBM47	100	79.747	ENSELUG00000006148	rbm47	93	84.637	Esox_lucius
ENSPCOG00000023451	RBM47	100	94.397	ENSFCAG00000012399	RBM47	100	93.548	Felis_catus
ENSPCOG00000023451	RBM47	100	87.059	ENSFALG00000002861	RBM47	100	86.218	Ficedula_albicollis
ENSPCOG00000023451	RBM47	100	90.678	ENSFDAG00000016326	RBM47	100	89.661	Fukomys_damarensis
ENSPCOG00000023451	RBM47	96	85.552	ENSFHEG00000007938	rbm47	100	74.199	Fundulus_heteroclitus
ENSPCOG00000023451	RBM47	100	78.987	ENSGMOG00000014802	rbm47	93	75.261	Gadus_morhua
ENSPCOG00000023451	RBM47	72	87.500	ENSGALG00000014267	RBM47	100	86.472	Gallus_gallus
ENSPCOG00000023451	RBM47	72	82.181	ENSGAFG00000020571	rbm47	98	80.267	Gambusia_affinis
ENSPCOG00000023451	RBM47	100	79.540	ENSGACG00000016223	rbm47	94	83.099	Gasterosteus_aculeatus
ENSPCOG00000023451	RBM47	100	87.766	ENSGAGG00000020051	RBM47	100	85.738	Gopherus_agassizii
ENSPCOG00000023451	RBM47	100	93.718	ENSGGOG00000001367	RBM47	100	93.039	Gorilla_gorilla
ENSPCOG00000023451	RBM47	100	81.395	ENSHBUG00000003520	rbm47	94	84.986	Haplochromis_burtoni
ENSPCOG00000023451	RBM47	100	72.115	ENSHGLG00000016914	RBM47	100	87.975	Heterocephalus_glaber_female
ENSPCOG00000023451	RBM47	100	81.463	ENSHGLG00100003071	-	100	81.293	Heterocephalus_glaber_male
ENSPCOG00000023451	RBM47	100	90.323	ENSHGLG00100014028	-	100	90.662	Heterocephalus_glaber_male
ENSPCOG00000023451	RBM47	99	75.758	ENSHCOG00000002074	rbm47	95	83.003	Hippocampus_comes
ENSPCOG00000023451	RBM47	100	80.749	ENSIPUG00000004743	rbm47	97	82.436	Ictalurus_punctatus
ENSPCOG00000023451	RBM47	100	91.933	ENSSTOG00000004727	RBM47	100	91.933	Ictidomys_tridecemlineatus
ENSPCOG00000023451	RBM47	100	91.582	ENSJJAG00000013823	Rbm47	100	91.582	Jaculus_jaculus
ENSPCOG00000023451	RBM47	100	83.333	ENSKMAG00000000084	rbm47	100	75.503	Kryptolebias_marmoratus
ENSPCOG00000023451	RBM47	100	80.739	ENSLBEG00000008436	rbm47	93	80.899	Labrus_bergylta
ENSPCOG00000023451	RBM47	100	84.350	ENSLACG00000007196	RBM47	100	81.956	Latimeria_chalumnae
ENSPCOG00000023451	RBM47	100	80.776	ENSLOCG00000012966	rbm47	95	78.752	Lepisosteus_oculatus
ENSPCOG00000023451	RBM47	100	91.231	ENSLAFG00000011998	RBM47	100	90.556	Loxodonta_africana
ENSPCOG00000023451	RBM47	100	93.718	ENSMFAG00000037967	RBM47	100	93.039	Macaca_fascicularis
ENSPCOG00000023451	RBM47	100	93.266	ENSMMUG00000012036	RBM47	100	92.761	Macaca_mulatta
ENSPCOG00000023451	RBM47	100	93.548	ENSMNEG00000040774	RBM47	100	92.869	Macaca_nemestrina
ENSPCOG00000023451	RBM47	100	93.651	ENSMLEG00000041432	RBM47	100	93.333	Mandrillus_leucophaeus
ENSPCOG00000023451	RBM47	100	81.186	ENSMAMG00000019143	rbm47	94	84.986	Mastacembelus_armatus
ENSPCOG00000023451	RBM47	100	81.395	ENSMZEG00005023659	rbm47	94	84.986	Maylandia_zebra
ENSPCOG00000023451	RBM47	100	86.120	ENSMGAG00000012226	RBM47	100	85.284	Meleagris_gallopavo
ENSPCOG00000023451	RBM47	100	90.388	ENSMAUG00000006493	Rbm47	100	90.388	Mesocricetus_auratus
ENSPCOG00000023451	RBM47	100	93.449	ENSMICG00000026417	RBM47	100	93.878	Microcebus_murinus
ENSPCOG00000023451	RBM47	100	90.878	ENSMOCG00000021170	Rbm47	100	90.878	Microtus_ochrogaster
ENSPCOG00000023451	RBM47	100	79.897	ENSMMOG00000007260	rbm47	94	81.921	Mola_mola
ENSPCOG00000023451	RBM47	100	84.000	ENSMODG00000020561	-	100	80.272	Monodelphis_domestica
ENSPCOG00000023451	RBM47	100	88.007	ENSMODG00000007003	RBM47	100	87.500	Monodelphis_domestica
ENSPCOG00000023451	RBM47	60	80.063	ENSMODG00000015426	-	96	79.612	Monodelphis_domestica
ENSPCOG00000023451	RBM47	100	81.915	ENSMALG00000005167	rbm47	100	81.383	Monopterus_albus
ENSPCOG00000023451	RBM47	100	91.096	MGP_CAROLIEiJ_G0027258	Rbm47	100	90.525	Mus_caroli
ENSPCOG00000023451	RBM47	100	91.781	ENSMUSG00000070780	Rbm47	100	90.863	Mus_musculus
ENSPCOG00000023451	RBM47	100	91.781	MGP_PahariEiJ_G0017040	Rbm47	100	90.863	Mus_pahari
ENSPCOG00000023451	RBM47	100	91.327	MGP_SPRETEiJ_G0028253	Rbm47	100	91.327	Mus_spretus
ENSPCOG00000023451	RBM47	100	93.570	ENSMPUG00000006177	RBM47	94	93.401	Mustela_putorius_furo
ENSPCOG00000023451	RBM47	100	91.525	ENSMLUG00000000889	RBM47	100	90.169	Myotis_lucifugus
ENSPCOG00000023451	RBM47	100	91.231	ENSNGAG00000003325	Rbm47	100	91.231	Nannospalax_galili
ENSPCOG00000023451	RBM47	100	81.654	ENSNBRG00000015092	rbm47	94	84.789	Neolamprologus_brichardi
ENSPCOG00000023451	RBM47	100	93.379	ENSNLEG00000017151	RBM47	100	92.699	Nomascus_leucogenys
ENSPCOG00000023451	RBM47	69	89.385	ENSMEUG00000009516	-	98	84.597	Notamacropus_eugenii
ENSPCOG00000023451	RBM47	85	95.021	ENSOPRG00000016507	-	75	95.021	Ochotona_princeps
ENSPCOG00000023451	RBM47	100	93.333	ENSODEG00000004873	RBM47	100	92.047	Octodon_degus
ENSPCOG00000023451	RBM47	100	80.513	ENSONIG00000009061	rbm47	94	84.225	Oreochromis_niloticus
ENSPCOG00000023451	RBM47	100	86.218	ENSOANG00000008978	RBM47	95	89.437	Ornithorhynchus_anatinus
ENSPCOG00000023451	RBM47	100	93.232	ENSOCUG00000012034	RBM47	100	92.724	Oryctolagus_cuniculus
ENSPCOG00000023451	RBM47	100	82.493	ENSORLG00000005847	rbm47	100	79.255	Oryzias_latipes
ENSPCOG00000023451	RBM47	100	82.493	ENSORLG00020005154	rbm47	100	79.255	Oryzias_latipes_hni
ENSPCOG00000023451	RBM47	100	82.759	ENSORLG00015000066	rbm47	100	79.521	Oryzias_latipes_hsok
ENSPCOG00000023451	RBM47	100	80.670	ENSOMEG00000010730	rbm47	100	80.851	Oryzias_melastigma
ENSPCOG00000023451	RBM47	100	86.371	ENSOGAG00000025193	-	100	86.031	Otolemur_garnettii
ENSPCOG00000023451	RBM47	100	94.247	ENSOGAG00000029367	-	100	94.078	Otolemur_garnettii
ENSPCOG00000023451	RBM47	100	86.667	ENSOARG00000012711	RBM47	100	84.720	Ovis_aries
ENSPCOG00000023451	RBM47	100	93.548	ENSPPAG00000029763	RBM47	100	92.869	Pan_paniscus
ENSPCOG00000023451	RBM47	100	91.681	ENSPPRG00000012873	RBM47	100	90.832	Panthera_pardus
ENSPCOG00000023451	RBM47	85	92.369	ENSPTIG00000017046	RBM47	100	92.169	Panthera_tigris_altaica
ENSPCOG00000023451	RBM47	100	93.718	ENSPTRG00000016006	RBM47	100	93.039	Pan_troglodytes
ENSPCOG00000023451	RBM47	100	93.718	ENSPANG00000005980	RBM47	100	93.039	Papio_anubis
ENSPCOG00000023451	RBM47	99	78.035	ENSPKIG00000013431	RBM47	100	71.669	Paramormyrops_kingsleyae
ENSPCOG00000023451	RBM47	96	85.552	ENSPKIG00000005037	rbm47	95	84.225	Paramormyrops_kingsleyae
ENSPCOG00000023451	RBM47	90	87.121	ENSPSIG00000017516	RBM47	97	86.742	Pelodiscus_sinensis
ENSPCOG00000023451	RBM47	100	82.353	ENSPMGG00000018540	rbm47	100	73.862	Periophthalmus_magnuspinnatus
ENSPCOG00000023451	RBM47	100	90.894	ENSPEMG00000011088	Rbm47	100	90.894	Peromyscus_maniculatus_bairdii
ENSPCOG00000023451	RBM47	96	84.831	ENSPFOG00000007997	rbm47	94	83.427	Poecilia_formosa
ENSPCOG00000023451	RBM47	96	84.551	ENSPLAG00000002072	rbm47	94	82.500	Poecilia_latipinna
ENSPCOG00000023451	RBM47	100	82.447	ENSPMEG00000017492	rbm47	100	80.319	Poecilia_mexicana
ENSPCOG00000023451	RBM47	96	85.552	ENSPREG00000008456	rbm47	100	74.525	Poecilia_reticulata
ENSPCOG00000023451	RBM47	98	80.372	ENSPPYG00000014688	RBM47	98	81.207	Pongo_abelii
ENSPCOG00000023451	RBM47	89	91.601	ENSPCAG00000011879	RBM47	81	92.481	Procavia_capensis
ENSPCOG00000023451	RBM47	100	91.246	ENSPVAG00000003812	RBM47	100	91.414	Pteropus_vampyrus
ENSPCOG00000023451	RBM47	100	81.395	ENSPNYG00000022868	rbm47	94	84.507	Pundamilia_nyererei
ENSPCOG00000023451	RBM47	100	75.164	ENSPNAG00000007940	rbm47	94	83.146	Pygocentrus_nattereri
ENSPCOG00000023451	RBM47	100	91.096	ENSRNOG00000002408	Rbm47	100	90.694	Rattus_norvegicus
ENSPCOG00000023451	RBM47	100	93.548	ENSRBIG00000039601	RBM47	100	92.869	Rhinopithecus_bieti
ENSPCOG00000023451	RBM47	100	93.548	ENSRROG00000044696	RBM47	100	92.869	Rhinopithecus_roxellana
ENSPCOG00000023451	RBM47	100	89.643	ENSSBOG00000028475	RBM47	100	95.000	Saimiri_boliviensis_boliviensis
ENSPCOG00000023451	RBM47	100	88.136	ENSSHAG00000017576	RBM47	100	87.627	Sarcophilus_harrisii
ENSPCOG00000023451	RBM47	100	74.043	ENSSFOG00015012445	rbm47	94	85.393	Scleropages_formosus
ENSPCOG00000023451	RBM47	99	75.042	ENSSFOG00015024101	RBM47	96	76.091	Scleropages_formosus
ENSPCOG00000023451	RBM47	100	80.206	ENSSMAG00000009744	rbm47	94	83.099	Scophthalmus_maximus
ENSPCOG00000023451	RBM47	100	83.200	ENSSDUG00000022684	rbm47	96	84.507	Seriola_dumerili
ENSPCOG00000023451	RBM47	100	83.422	ENSSLDG00000003109	rbm47	100	81.117	Seriola_lalandi_dorsalis
ENSPCOG00000023451	RBM47	85	91.295	ENSSARG00000001735	RBM47	75	92.188	Sorex_araneus
ENSPCOG00000023451	RBM47	100	84.148	ENSSPUG00000007515	RBM47	100	85.600	Sphenodon_punctatus
ENSPCOG00000023451	RBM47	100	84.043	ENSSPAG00000001257	rbm47	100	81.649	Stegastes_partitus
ENSPCOG00000023451	RBM47	100	92.217	ENSSSCG00000008796	RBM47	100	91.878	Sus_scrofa
ENSPCOG00000023451	RBM47	100	86.700	ENSTGUG00000008705	RBM47	100	85.859	Taeniopygia_guttata
ENSPCOG00000023451	RBM47	100	75.379	ENSTRUG00000014050	rbm47	98	74.695	Takifugu_rubripes
ENSPCOG00000023451	RBM47	100	80.928	ENSTNIG00000006127	rbm47	94	76.049	Tetraodon_nigroviridis
ENSPCOG00000023451	RBM47	87	90.909	ENSTBEG00000001607	RBM47	76	90.909	Tupaia_belangeri
ENSPCOG00000023451	RBM47	100	92.007	ENSTTRG00000002839	RBM47	100	92.517	Tursiops_truncatus
ENSPCOG00000023451	RBM47	100	93.570	ENSUAMG00000021346	RBM47	100	93.570	Ursus_americanus
ENSPCOG00000023451	RBM47	56	94.652	ENSVPAG00000000641	-	57	93.048	Vicugna_pacos
ENSPCOG00000023451	RBM47	96	94.533	ENSVVUG00000014774	RBM47	100	93.063	Vulpes_vulpes
ENSPCOG00000023451	RBM47	100	84.921	ENSXETG00000012802	rbm47	100	83.249	Xenopus_tropicalis
ENSPCOG00000023451	RBM47	100	75.665	ENSXCOG00000000780	rbm47	100	80.214	Xiphophorus_couchianus
ENSPCOG00000023451	RBM47	100	81.915	ENSXMAG00000009874	rbm47	100	79.787	Xiphophorus_maculatus