EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000023985 (Gene tree)
Gene ID: 105822662
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 48517 bases
Position: chrKQ026291.1:9527444-9575960
Accession: 105822662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000023692	ResIII	PF04851.15	1.2e-07	1	1
ENSPCOP00000023694	ResIII	PF04851.15	1.7e-07	1	1
ENSPCOP00000023681	ResIII	PF04851.15	1.9e-07	1	1
ENSPCOP00000023687	ResIII	PF04851.15	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000034375	HELLS-205	2097	XM_012659676	ENSPCOP00000023695	698 (aa)	XP_012515130	A0A2K6GBR0
ENSPCOT00000034367	HELLS-202	3113	XM_012659679	ENSPCOP00000023687	699 (aa)	XP_012515133	A0A2K6GBV7
ENSPCOT00000034374	HELLS-204	2391	XM_012659670	ENSPCOP00000023694	796 (aa)	XP_012515124	A0A2K6GBU0
ENSPCOT00000034372	HELLS-203	2502	-	ENSPCOP00000023692	833 (aa)	-	A0A2K6GBV8
ENSPCOT00000034361	HELLS-201	3161	XM_012659671	ENSPCOP00000023681	752 (aa)	XP_012515125	A0A2K6GBS9

Gene Model

Click here to download ENSPCOG00000023985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000023985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000023985	HELLS	64	35.948	ENSPCOG00000020478	SMARCAD1	51	35.948
ENSPCOG00000023985	HELLS	83	38.347	ENSPCOG00000001089	CHD6	68	36.242
ENSPCOG00000023985	HELLS	87	48.207	ENSPCOG00000026744	SMARCA5	62	48.207
ENSPCOG00000023985	HELLS	78	30.036	ENSPCOG00000026714	ERCC6L2	76	30.036
ENSPCOG00000023985	HELLS	64	36.364	ENSPCOG00000015423	RAD54L	55	34.375
ENSPCOG00000023985	HELLS	66	48.207	ENSPCOG00000020722	SMARCA1	67	48.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000023985	HELLS	100	96.143	ENSG00000119969	HELLS	100	96.359	Homo_sapiens
ENSPCOG00000023985	HELLS	97	67.643	ENSAPOG00000007707	hells	99	62.422	Acanthochromis_polyacanthus
ENSPCOG00000023985	HELLS	99	95.382	ENSAMEG00000013525	HELLS	100	90.437	Ailuropoda_melanoleuca
ENSPCOG00000023985	HELLS	92	69.706	ENSACIG00000018996	hells	99	66.761	Amphilophus_citrinellus
ENSPCOG00000023985	HELLS	96	69.345	ENSAOCG00000006348	hells	97	63.241	Amphiprion_ocellaris
ENSPCOG00000023985	HELLS	96	68.750	ENSAPEG00000001422	hells	97	62.757	Amphiprion_percula
ENSPCOG00000023985	HELLS	98	67.728	ENSATEG00000008107	hells	99	62.687	Anabas_testudineus
ENSPCOG00000023985	HELLS	98	83.623	ENSAPLG00000002649	HELLS	99	78.463	Anas_platyrhynchos
ENSPCOG00000023985	HELLS	99	75.862	ENSACAG00000028785	HELLS	96	75.556	Anolis_carolinensis
ENSPCOG00000023985	HELLS	99	95.094	ENSANAG00000034765	-	100	94.421	Aotus_nancymaae
ENSPCOG00000023985	HELLS	96	67.407	ENSACLG00000007613	hells	99	62.159	Astatotilapia_calliptera
ENSPCOG00000023985	HELLS	95	68.168	ENSAMXG00000002088	hells	99	66.571	Astyanax_mexicanus
ENSPCOG00000023985	HELLS	96	95.678	ENSBTAG00000005979	HELLS	100	95.678	Bos_taurus
ENSPCOG00000023985	HELLS	99	95.527	ENSCJAG00000015819	HELLS	100	94.850	Callithrix_jacchus
ENSPCOG00000023985	HELLS	99	96.110	ENSCAFG00000008090	HELLS	100	90.566	Canis_familiaris
ENSPCOG00000023985	HELLS	99	95.960	ENSCAFG00020004809	HELLS	99	90.783	Canis_lupus_dingo
ENSPCOG00000023985	HELLS	99	93.678	ENSCHIG00000019462	HELLS	100	90.203	Capra_hircus
ENSPCOG00000023985	HELLS	100	94.143	ENSTSYG00000005811	-	100	94.143	Carlito_syrichta
ENSPCOG00000023985	HELLS	100	92.961	ENSCPOG00000003043	HELLS	100	89.138	Cavia_porcellus
ENSPCOG00000023985	HELLS	63	95.954	ENSCCAG00000026761	HELLS	97	95.954	Cebus_capucinus
ENSPCOG00000023985	HELLS	100	95.565	ENSCATG00000033830	HELLS	100	95.933	Cercocebus_atys
ENSPCOG00000023985	HELLS	100	92.829	ENSCLAG00000003938	HELLS	100	89.892	Chinchilla_lanigera
ENSPCOG00000023985	HELLS	99	95.671	ENSCSAG00000006181	HELLS	100	95.792	Chlorocebus_sabaeus
ENSPCOG00000023985	HELLS	97	84.934	ENSCPBG00000025739	HELLS	99	84.934	Chrysemys_picta_bellii
ENSPCOG00000023985	HELLS	100	95.994	ENSCANG00000037736	HELLS	100	96.213	Colobus_angolensis_palliatus
ENSPCOG00000023985	HELLS	99	92.641	ENSCGRG00001017410	Hells	100	87.108	Cricetulus_griseus_chok1gshd
ENSPCOG00000023985	HELLS	98	66.327	ENSCSEG00000016985	hells	99	62.484	Cynoglossus_semilaevis
ENSPCOG00000023985	HELLS	74	62.669	ENSCVAG00000000159	hells	97	61.914	Cyprinodon_variegatus
ENSPCOG00000023985	HELLS	98	67.770	ENSDARG00000057738	hells	95	64.112	Danio_rerio
ENSPCOG00000023985	HELLS	91	95.577	ENSDNOG00000017758	HELLS	100	95.577	Dasypus_novemcinctus
ENSPCOG00000023985	HELLS	99	93.074	ENSDORG00000011812	Hells	100	88.180	Dipodomys_ordii
ENSPCOG00000023985	HELLS	67	69.874	ENSEBUG00000016152	hells	93	54.902	Eptatretus_burgeri
ENSPCOG00000023985	HELLS	99	95.960	ENSEASG00005011764	HELLS	100	92.570	Equus_asinus_asinus
ENSPCOG00000023985	HELLS	99	95.382	ENSECAG00000018810	HELLS	100	90.426	Equus_caballus
ENSPCOG00000023985	HELLS	78	98.913	ENSEEUG00000007680	HELLS	77	98.913	Erinaceus_europaeus
ENSPCOG00000023985	HELLS	98	66.232	ENSELUG00000014909	hells	94	62.195	Esox_lucius
ENSPCOG00000023985	HELLS	100	95.279	ENSFCAG00000005206	HELLS	100	95.372	Felis_catus
ENSPCOG00000023985	HELLS	99	82.948	ENSFALG00000007136	HELLS	99	78.795	Ficedula_albicollis
ENSPCOG00000023985	HELLS	99	94.092	ENSFDAG00000010042	HELLS	100	90.012	Fukomys_damarensis
ENSPCOG00000023985	HELLS	98	65.224	ENSFHEG00000022950	hells	97	63.904	Fundulus_heteroclitus
ENSPCOG00000023985	HELLS	99	82.878	ENSGALG00000005451	HELLS	100	83.095	Gallus_gallus
ENSPCOG00000023985	HELLS	98	66.089	ENSGAFG00000001204	hells	94	61.548	Gambusia_affinis
ENSPCOG00000023985	HELLS	99	64.000	ENSGACG00000003897	hells	91	62.468	Gasterosteus_aculeatus
ENSPCOG00000023985	HELLS	99	83.862	ENSGAGG00000010269	HELLS	100	84.075	Gopherus_agassizii
ENSPCOG00000023985	HELLS	100	96.143	ENSGGOG00000008103	HELLS	100	96.218	Gorilla_gorilla
ENSPCOG00000023985	HELLS	98	66.715	ENSHBUG00000010270	hells	99	62.159	Haplochromis_burtoni
ENSPCOG00000023985	HELLS	85	88.924	ENSHGLG00000006537	-	100	89.264	Heterocephalus_glaber_female
ENSPCOG00000023985	HELLS	100	93.094	ENSHGLG00000011377	-	100	89.651	Heterocephalus_glaber_female
ENSPCOG00000023985	HELLS	99	83.478	ENSHGLG00100001957	-	95	82.579	Heterocephalus_glaber_male
ENSPCOG00000023985	HELLS	100	92.829	ENSHGLG00100017230	-	100	89.410	Heterocephalus_glaber_male
ENSPCOG00000023985	HELLS	96	65.976	ENSHCOG00000001119	hells	96	65.254	Hippocampus_comes
ENSPCOG00000023985	HELLS	99	66.571	ENSIPUG00000002634	HELLS	99	61.475	Ictalurus_punctatus
ENSPCOG00000023985	HELLS	99	95.245	ENSSTOG00000021976	HELLS	100	91.215	Ictidomys_tridecemlineatus
ENSPCOG00000023985	HELLS	98	93.275	ENSJJAG00000000865	Hells	99	87.176	Jaculus_jaculus
ENSPCOG00000023985	HELLS	98	67.536	ENSKMAG00000017279	hells	96	63.075	Kryptolebias_marmoratus
ENSPCOG00000023985	HELLS	98	67.873	ENSLBEG00000027807	hells	96	62.816	Labrus_bergylta
ENSPCOG00000023985	HELLS	99	94.380	ENSLAFG00000007049	HELLS	100	90.734	Loxodonta_africana
ENSPCOG00000023985	HELLS	100	95.565	ENSMFAG00000044053	HELLS	100	95.565	Macaca_fascicularis
ENSPCOG00000023985	HELLS	99	95.954	ENSMMUG00000017255	HELLS	100	95.954	Macaca_mulatta
ENSPCOG00000023985	HELLS	100	95.565	ENSMNEG00000042628	HELLS	100	95.933	Macaca_nemestrina
ENSPCOG00000023985	HELLS	100	95.565	ENSMLEG00000041751	HELLS	100	95.565	Mandrillus_leucophaeus
ENSPCOG00000023985	HELLS	98	66.522	ENSMAMG00000009850	hells	98	66.715	Mastacembelus_armatus
ENSPCOG00000023985	HELLS	98	66.715	ENSMZEG00005018414	hells	99	62.159	Maylandia_zebra
ENSPCOG00000023985	HELLS	99	82.496	ENSMGAG00000006818	HELLS	97	82.727	Meleagris_gallopavo
ENSPCOG00000023985	HELLS	99	92.352	ENSMAUG00000021941	Hells	99	85.404	Mesocricetus_auratus
ENSPCOG00000023985	HELLS	82	96.516	ENSMICG00000046554	-	95	96.516	Microcebus_murinus
ENSPCOG00000023985	HELLS	99	92.208	ENSMOCG00000019342	Hells	100	87.286	Microtus_ochrogaster
ENSPCOG00000023985	HELLS	95	64.275	ENSMMOG00000007950	hells	97	59.046	Mola_mola
ENSPCOG00000023985	HELLS	100	86.093	ENSMODG00000005589	-	51	81.807	Monodelphis_domestica
ENSPCOG00000023985	HELLS	96	67.704	ENSMALG00000010244	hells	94	60.546	Monopterus_albus
ENSPCOG00000023985	HELLS	99	92.352	MGP_CAROLIEiJ_G0022930	Hells	100	87.952	Mus_caroli
ENSPCOG00000023985	HELLS	99	92.208	ENSMUSG00000025001	Hells	100	87.831	Mus_musculus
ENSPCOG00000023985	HELLS	99	92.929	MGP_PahariEiJ_G0014423	Hells	100	88.675	Mus_pahari
ENSPCOG00000023985	HELLS	99	92.785	MGP_SPRETEiJ_G0023848	Hells	100	88.193	Mus_spretus
ENSPCOG00000023985	HELLS	99	95.238	ENSMPUG00000017131	HELLS	100	90.544	Mustela_putorius_furo
ENSPCOG00000023985	HELLS	99	92.929	ENSMLUG00000030511	HELLS	100	87.589	Myotis_lucifugus
ENSPCOG00000023985	HELLS	99	91.931	ENSNGAG00000014049	Hells	100	87.367	Nannospalax_galili
ENSPCOG00000023985	HELLS	96	63.516	ENSNBRG00000024242	hells	99	58.663	Neolamprologus_brichardi
ENSPCOG00000023985	HELLS	100	95.994	ENSNLEG00000012987	HELLS	100	96.353	Nomascus_leucogenys
ENSPCOG00000023985	HELLS	100	90.438	ENSODEG00000015916	HELLS	100	86.423	Octodon_degus
ENSPCOG00000023985	HELLS	98	66.715	ENSONIG00000013166	hells	94	62.745	Oreochromis_niloticus
ENSPCOG00000023985	HELLS	99	85.755	ENSOANG00000005139	HELLS	100	81.796	Ornithorhynchus_anatinus
ENSPCOG00000023985	HELLS	99	94.949	ENSOCUG00000026731	HELLS	100	90.307	Oryctolagus_cuniculus
ENSPCOG00000023985	HELLS	98	66.378	ENSORLG00000000987	hells	96	62.206	Oryzias_latipes
ENSPCOG00000023985	HELLS	98	66.234	ENSORLG00020003952	hells	96	61.836	Oryzias_latipes_hni
ENSPCOG00000023985	HELLS	97	67.308	ENSORLG00015010960	hells	96	61.586	Oryzias_latipes_hsok
ENSPCOG00000023985	HELLS	98	66.234	ENSOMEG00000000135	hells	96	61.594	Oryzias_melastigma
ENSPCOG00000023985	HELLS	99	96.110	ENSOGAG00000017145	HELLS	99	92.354	Otolemur_garnettii
ENSPCOG00000023985	HELLS	99	94.661	ENSOARG00000004495	HELLS	100	90.307	Ovis_aries
ENSPCOG00000023985	HELLS	100	95.857	ENSPPAG00000001726	HELLS	100	96.078	Pan_paniscus
ENSPCOG00000023985	HELLS	100	95.422	ENSPPRG00000005839	HELLS	100	95.512	Panthera_pardus
ENSPCOG00000023985	HELLS	100	95.422	ENSPTIG00000007647	HELLS	100	95.512	Panthera_tigris_altaica
ENSPCOG00000023985	HELLS	100	95.857	ENSPTRG00000002778	HELLS	100	95.857	Pan_troglodytes
ENSPCOG00000023985	HELLS	100	95.565	ENSPANG00000033528	HELLS	100	95.933	Papio_anubis
ENSPCOG00000023985	HELLS	98	65.896	ENSPKIG00000010890	hells	98	61.406	Paramormyrops_kingsleyae
ENSPCOG00000023985	HELLS	99	83.309	ENSPSIG00000005462	HELLS	100	78.777	Pelodiscus_sinensis
ENSPCOG00000023985	HELLS	98	65.843	ENSPMGG00000014690	hells	98	65.843	Periophthalmus_magnuspinnatus
ENSPCOG00000023985	HELLS	93	90.671	ENSPEMG00000017579	Hells	100	90.671	Peromyscus_maniculatus_bairdii
ENSPCOG00000023985	HELLS	99	61.722	ENSPMAG00000004376	hells	98	58.738	Petromyzon_marinus
ENSPCOG00000023985	HELLS	100	85.430	ENSPCIG00000013361	HELLS	100	81.294	Phascolarctos_cinereus
ENSPCOG00000023985	HELLS	98	65.517	ENSPFOG00000001954	hells	96	60.337	Poecilia_formosa
ENSPCOG00000023985	HELLS	98	65.368	ENSPLAG00000006504	hells	97	63.854	Poecilia_latipinna
ENSPCOG00000023985	HELLS	98	65.512	ENSPMEG00000003024	hells	97	63.994	Poecilia_mexicana
ENSPCOG00000023985	HELLS	98	65.224	ENSPREG00000020337	hells	96	60.096	Poecilia_reticulata
ENSPCOG00000023985	HELLS	99	90.270	ENSPPYG00000002502	HELLS	100	88.235	Pongo_abelii
ENSPCOG00000023985	HELLS	99	90.607	ENSPCAG00000013618	HELLS	100	84.515	Procavia_capensis
ENSPCOG00000023985	HELLS	92	97.238	ENSPVAG00000017899	HELLS	92	97.238	Pteropus_vampyrus
ENSPCOG00000023985	HELLS	96	65.727	ENSPNYG00000009100	hells	99	60.745	Pundamilia_nyererei
ENSPCOG00000023985	HELLS	95	67.016	ENSPNAG00000029968	hells	99	60.837	Pygocentrus_nattereri
ENSPCOG00000023985	HELLS	99	92.929	ENSRNOG00000047692	LOC100911660	100	88.554	Rattus_norvegicus
ENSPCOG00000023985	HELLS	99	92.929	ENSRNOG00000047104	Hells	100	88.298	Rattus_norvegicus
ENSPCOG00000023985	HELLS	99	94.942	ENSRBIG00000041080	HELLS	100	94.942	Rhinopithecus_bieti
ENSPCOG00000023985	HELLS	100	95.279	ENSRROG00000040169	HELLS	100	95.652	Rhinopithecus_roxellana
ENSPCOG00000023985	HELLS	100	85.563	ENSSHAG00000014358	HELLS	100	82.014	Sarcophilus_harrisii
ENSPCOG00000023985	HELLS	98	68.831	ENSSFOG00015017895	hells	98	64.756	Scleropages_formosus
ENSPCOG00000023985	HELLS	98	67.149	ENSSMAG00000017423	hells	99	61.557	Scophthalmus_maximus
ENSPCOG00000023985	HELLS	98	67.438	ENSSDUG00000016924	hells	99	62.407	Seriola_dumerili
ENSPCOG00000023985	HELLS	98	65.072	ENSSLDG00000018960	hells	94	61.084	Seriola_lalandi_dorsalis
ENSPCOG00000023985	HELLS	99	81.295	ENSSPUG00000017425	HELLS	100	79.397	Sphenodon_punctatus
ENSPCOG00000023985	HELLS	95	68.263	ENSSPAG00000015579	hells	99	65.743	Stegastes_partitus
ENSPCOG00000023985	HELLS	99	95.238	ENSSSCG00000010486	HELLS	100	90.544	Sus_scrofa
ENSPCOG00000023985	HELLS	99	83.453	ENSTGUG00000007157	HELLS	99	78.401	Taeniopygia_guttata
ENSPCOG00000023985	HELLS	99	67.004	ENSTRUG00000000350	hells	96	63.012	Takifugu_rubripes
ENSPCOG00000023985	HELLS	98	57.632	ENSTNIG00000003738	hells	98	56.597	Tetraodon_nigroviridis
ENSPCOG00000023985	HELLS	99	95.245	ENSUAMG00000003343	HELLS	100	91.095	Ursus_americanus
ENSPCOG00000023985	HELLS	99	95.527	ENSUMAG00000004748	HELLS	99	94.905	Ursus_maritimus
ENSPCOG00000023985	HELLS	99	93.795	ENSVPAG00000010115	HELLS	100	89.112	Vicugna_pacos
ENSPCOG00000023985	HELLS	99	95.815	ENSVVUG00000022808	HELLS	100	90.544	Vulpes_vulpes
ENSPCOG00000023985	HELLS	96	66.519	ENSXCOG00000013840	hells	98	59.879	Xiphophorus_couchianus
ENSPCOG00000023985	HELLS	98	65.801	ENSXMAG00000005731	hells	97	64.789	Xiphophorus_maculatus