EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000024172 (Gene tree)
Gene ID: 105822730
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 83221 bases
Position: chrKQ026291.1:2582544-2665764
Accession: 105822730
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000024041	DND1_DSRM	PF14709.7	9.3e-25	1	1
ENSPCOP00000024041	RRM_1	PF00076.22	5.6e-40	1	3
ENSPCOP00000024041	RRM_1	PF00076.22	5.6e-40	2	3
ENSPCOP00000024041	RRM_1	PF00076.22	5.6e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000034721	A1CF-201	2086	XM_012659761	ENSPCOP00000024041	596 (aa)	XP_012515215	A0A2K6GCT5

Gene Model

Click here to download ENSPCOG00000024172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000024172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000024172	A1CF	93	69.206	ENSPCOG00000024347	RBM46	99	69.206
ENSPCOG00000024172	A1CF	73	59.641	ENSPCOG00000023451	RBM47	60	72.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000024172	A1CF	100	96.812	ENSG00000148584	A1CF	100	99.005	Homo_sapiens
ENSPCOG00000024172	A1CF	100	73.344	ENSAPOG00000008259	a1cf	100	72.351	Acanthochromis_polyacanthus
ENSPCOG00000024172	A1CF	100	94.799	ENSAMEG00000000523	A1CF	100	94.966	Ailuropoda_melanoleuca
ENSPCOG00000024172	A1CF	100	76.509	ENSACIG00000008632	a1cf	100	76.183	Amphilophus_citrinellus
ENSPCOG00000024172	A1CF	100	74.020	ENSAOCG00000023744	a1cf	96	83.188	Amphiprion_ocellaris
ENSPCOG00000024172	A1CF	100	75.000	ENSAPEG00000009537	a1cf	100	74.837	Amphiprion_percula
ENSPCOG00000024172	A1CF	100	76.547	ENSATEG00000013720	a1cf	100	76.221	Anabas_testudineus
ENSPCOG00000024172	A1CF	100	88.107	ENSAPLG00000002964	A1CF	100	87.772	Anas_platyrhynchos
ENSPCOG00000024172	A1CF	100	82.747	ENSACAG00000015269	A1CF	100	82.412	Anolis_carolinensis
ENSPCOG00000024172	A1CF	100	95.638	ENSANAG00000019974	A1CF	100	95.638	Aotus_nancymaae
ENSPCOG00000024172	A1CF	100	73.736	ENSACLG00000017428	a1cf	100	73.573	Astatotilapia_calliptera
ENSPCOG00000024172	A1CF	100	74.380	ENSAMXG00000018180	a1cf	100	73.388	Astyanax_mexicanus
ENSPCOG00000024172	A1CF	100	94.966	ENSBTAG00000021195	A1CF	100	95.247	Bos_taurus
ENSPCOG00000024172	A1CF	100	96.980	ENSCJAG00000005045	A1CF	100	96.980	Callithrix_jacchus
ENSPCOG00000024172	A1CF	100	94.966	ENSCAFG00000015581	A1CF	100	94.966	Canis_familiaris
ENSPCOG00000024172	A1CF	100	94.966	ENSCAFG00020026421	A1CF	100	94.966	Canis_lupus_dingo
ENSPCOG00000024172	A1CF	100	94.966	ENSCHIG00000020411	A1CF	100	94.966	Capra_hircus
ENSPCOG00000024172	A1CF	95	95.752	ENSTSYG00000001755	A1CF	100	94.671	Carlito_syrichta
ENSPCOG00000024172	A1CF	100	83.642	ENSCAPG00000017386	A1CF	100	83.642	Cavia_aperea
ENSPCOG00000024172	A1CF	100	95.973	ENSCPOG00000009807	A1CF	100	95.302	Cavia_porcellus
ENSPCOG00000024172	A1CF	100	96.644	ENSCCAG00000018168	A1CF	100	96.644	Cebus_capucinus
ENSPCOG00000024172	A1CF	100	94.966	ENSCATG00000043715	A1CF	100	94.966	Cercocebus_atys
ENSPCOG00000024172	A1CF	100	95.645	ENSCLAG00000010424	A1CF	100	95.645	Chinchilla_lanigera
ENSPCOG00000024172	A1CF	100	96.644	ENSCSAG00000007032	A1CF	100	96.644	Chlorocebus_sabaeus
ENSPCOG00000024172	A1CF	98	89.831	ENSCHOG00000009089	A1CF	98	89.661	Choloepus_hoffmanni
ENSPCOG00000024172	A1CF	100	87.940	ENSCPBG00000026464	A1CF	100	87.772	Chrysemys_picta_bellii
ENSPCOG00000024172	A1CF	100	96.644	ENSCANG00000038032	A1CF	100	96.644	Colobus_angolensis_palliatus
ENSPCOG00000024172	A1CF	100	93.792	ENSCGRG00001017413	A1cf	100	93.792	Cricetulus_griseus_chok1gshd
ENSPCOG00000024172	A1CF	100	93.624	ENSCGRG00000017332	A1cf	100	93.624	Cricetulus_griseus_crigri
ENSPCOG00000024172	A1CF	100	75.622	ENSCSEG00000002361	a1cf	100	75.290	Cynoglossus_semilaevis
ENSPCOG00000024172	A1CF	100	74.593	ENSCVAG00000010520	a1cf	100	75.407	Cyprinodon_variegatus
ENSPCOG00000024172	A1CF	100	77.741	ENSDARG00000002968	a1cf	100	78.405	Danio_rerio
ENSPCOG00000024172	A1CF	100	94.295	ENSDNOG00000002829	A1CF	100	94.295	Dasypus_novemcinctus
ENSPCOG00000024172	A1CF	81	92.754	ENSETEG00000012527	A1CF	81	92.754	Echinops_telfairi
ENSPCOG00000024172	A1CF	100	96.817	ENSEASG00005012924	A1CF	100	96.817	Equus_asinus_asinus
ENSPCOG00000024172	A1CF	100	96.147	ENSECAG00000010424	A1CF	100	96.482	Equus_caballus
ENSPCOG00000024172	A1CF	79	79.487	ENSEEUG00000000013	A1CF	99	77.178	Erinaceus_europaeus
ENSPCOG00000024172	A1CF	100	79.568	ENSELUG00000003159	a1cf	100	79.236	Esox_lucius
ENSPCOG00000024172	A1CF	100	91.946	ENSFCAG00000011179	A1CF	100	92.282	Felis_catus
ENSPCOG00000024172	A1CF	100	85.260	ENSFALG00000013183	A1CF	100	84.925	Ficedula_albicollis
ENSPCOG00000024172	A1CF	100	93.121	ENSFDAG00000019371	A1CF	100	92.617	Fukomys_damarensis
ENSPCOG00000024172	A1CF	100	70.195	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSPCOG00000024172	A1CF	100	71.829	ENSGMOG00000018943	a1cf	100	71.664	Gadus_morhua
ENSPCOG00000024172	A1CF	95	87.456	ENSGALG00000003765	A1CF	97	87.102	Gallus_gallus
ENSPCOG00000024172	A1CF	100	69.901	ENSGAFG00000014868	a1cf	100	70.230	Gambusia_affinis
ENSPCOG00000024172	A1CF	100	73.849	ENSGACG00000010241	a1cf	100	73.520	Gasterosteus_aculeatus
ENSPCOG00000024172	A1CF	94	87.766	ENSGAGG00000016508	A1CF	97	87.589	Gopherus_agassizii
ENSPCOG00000024172	A1CF	100	96.644	ENSGGOG00000009670	A1CF	100	96.644	Gorilla_gorilla
ENSPCOG00000024172	A1CF	100	75.204	ENSHBUG00000021959	a1cf	100	75.530	Haplochromis_burtoni
ENSPCOG00000024172	A1CF	100	94.631	ENSHGLG00000008955	A1CF	100	94.631	Heterocephalus_glaber_female
ENSPCOG00000024172	A1CF	100	93.960	ENSHGLG00100000518	A1CF	100	93.960	Heterocephalus_glaber_male
ENSPCOG00000024172	A1CF	100	69.593	ENSHCOG00000017669	a1cf	100	71.753	Hippocampus_comes
ENSPCOG00000024172	A1CF	89	82.649	ENSIPUG00000010367	a1cf	95	81.989	Ictalurus_punctatus
ENSPCOG00000024172	A1CF	100	76.748	ENSKMAG00000006568	a1cf	100	76.585	Kryptolebias_marmoratus
ENSPCOG00000024172	A1CF	99	75.896	ENSLBEG00000020994	a1cf	98	75.738	Labrus_bergylta
ENSPCOG00000024172	A1CF	100	80.833	ENSLACG00000008061	A1CF	100	80.500	Latimeria_chalumnae
ENSPCOG00000024172	A1CF	100	80.865	ENSLOCG00000006302	a1cf	100	80.699	Lepisosteus_oculatus
ENSPCOG00000024172	A1CF	100	94.799	ENSLAFG00000015462	A1CF	100	94.799	Loxodonta_africana
ENSPCOG00000024172	A1CF	100	95.302	ENSMFAG00000035948	A1CF	100	95.302	Macaca_fascicularis
ENSPCOG00000024172	A1CF	100	95.302	ENSMMUG00000007077	A1CF	100	95.302	Macaca_mulatta
ENSPCOG00000024172	A1CF	100	94.966	ENSMNEG00000031454	A1CF	100	94.966	Macaca_nemestrina
ENSPCOG00000024172	A1CF	100	96.309	ENSMLEG00000037223	A1CF	100	96.309	Mandrillus_leucophaeus
ENSPCOG00000024172	A1CF	100	73.977	ENSMAMG00000010402	a1cf	100	74.510	Mastacembelus_armatus
ENSPCOG00000024172	A1CF	100	76.705	ENSMZEG00005013245	a1cf	100	76.040	Maylandia_zebra
ENSPCOG00000024172	A1CF	100	87.458	ENSMGAG00000001507	A1CF	100	87.124	Meleagris_gallopavo
ENSPCOG00000024172	A1CF	100	93.121	ENSMAUG00000007422	A1cf	100	93.121	Mesocricetus_auratus
ENSPCOG00000024172	A1CF	100	96.823	ENSMICG00000003377	A1CF	100	96.823	Microcebus_murinus
ENSPCOG00000024172	A1CF	100	93.456	ENSMOCG00000021536	A1cf	100	92.953	Microtus_ochrogaster
ENSPCOG00000024172	A1CF	100	68.464	ENSMMOG00000009422	a1cf	100	68.464	Mola_mola
ENSPCOG00000024172	A1CF	89	90.038	ENSMODG00000016478	A1CF	97	90.341	Monodelphis_domestica
ENSPCOG00000024172	A1CF	100	72.591	ENSMALG00000012992	a1cf	100	71.215	Monopterus_albus
ENSPCOG00000024172	A1CF	100	92.953	MGP_CAROLIEiJ_G0022873	A1cf	100	92.450	Mus_caroli
ENSPCOG00000024172	A1CF	100	92.953	ENSMUSG00000052595	A1cf	99	95.789	Mus_musculus
ENSPCOG00000024172	A1CF	100	92.617	MGP_PahariEiJ_G0014366	A1cf	100	91.611	Mus_pahari
ENSPCOG00000024172	A1CF	100	92.450	MGP_SPRETEiJ_G0023792	A1cf	100	91.946	Mus_spretus
ENSPCOG00000024172	A1CF	100	89.094	ENSMPUG00000016971	A1CF	100	89.094	Mustela_putorius_furo
ENSPCOG00000024172	A1CF	100	93.960	ENSMLUG00000016071	A1CF	100	94.128	Myotis_lucifugus
ENSPCOG00000024172	A1CF	100	94.295	ENSNGAG00000015136	A1cf	100	93.960	Nannospalax_galili
ENSPCOG00000024172	A1CF	100	75.530	ENSNBRG00000001712	a1cf	100	75.856	Neolamprologus_brichardi
ENSPCOG00000024172	A1CF	100	97.483	ENSNLEG00000012028	A1CF	100	97.483	Nomascus_leucogenys
ENSPCOG00000024172	A1CF	94	88.298	ENSMEUG00000015909	A1CF	100	88.121	Notamacropus_eugenii
ENSPCOG00000024172	A1CF	88	84.571	ENSOPRG00000010667	A1CF	100	83.516	Ochotona_princeps
ENSPCOG00000024172	A1CF	100	75.856	ENSONIG00000019105	a1cf	100	75.367	Oreochromis_niloticus
ENSPCOG00000024172	A1CF	78	88.437	ENSOANG00000007360	A1CF	99	88.437	Ornithorhynchus_anatinus
ENSPCOG00000024172	A1CF	100	94.128	ENSOCUG00000011587	A1CF	100	94.128	Oryctolagus_cuniculus
ENSPCOG00000024172	A1CF	100	73.829	ENSORLG00000013342	a1cf	100	73.246	Oryzias_latipes
ENSPCOG00000024172	A1CF	100	75.733	ENSORLG00020000586	a1cf	100	74.919	Oryzias_latipes_hni
ENSPCOG00000024172	A1CF	100	75.896	ENSORLG00015018569	a1cf	100	75.081	Oryzias_latipes_hsok
ENSPCOG00000024172	A1CF	100	74.468	ENSOMEG00000013531	a1cf	100	73.650	Oryzias_melastigma
ENSPCOG00000024172	A1CF	100	96.141	ENSOGAG00000012884	A1CF	100	96.141	Otolemur_garnettii
ENSPCOG00000024172	A1CF	100	94.966	ENSOARG00000013695	A1CF	100	94.966	Ovis_aries
ENSPCOG00000024172	A1CF	97	94.637	ENSPPAG00000028115	A1CF	100	97.976	Pan_paniscus
ENSPCOG00000024172	A1CF	100	93.624	ENSPPRG00000012180	A1CF	100	93.960	Panthera_pardus
ENSPCOG00000024172	A1CF	100	93.624	ENSPTIG00000021223	A1CF	100	93.960	Panthera_tigris_altaica
ENSPCOG00000024172	A1CF	100	96.477	ENSPTRG00000002508	A1CF	100	96.477	Pan_troglodytes
ENSPCOG00000024172	A1CF	100	95.302	ENSPANG00000021988	A1CF	100	95.302	Papio_anubis
ENSPCOG00000024172	A1CF	100	79.734	ENSPKIG00000025176	a1cf	100	78.738	Paramormyrops_kingsleyae
ENSPCOG00000024172	A1CF	100	86.432	ENSPSIG00000010318	A1CF	100	86.265	Pelodiscus_sinensis
ENSPCOG00000024172	A1CF	88	70.857	ENSPMGG00000013359	a1cf	99	67.119	Periophthalmus_magnuspinnatus
ENSPCOG00000024172	A1CF	100	94.128	ENSPEMG00000015021	A1cf	100	93.456	Peromyscus_maniculatus_bairdii
ENSPCOG00000024172	A1CF	100	88.275	ENSPCIG00000002175	A1CF	100	88.107	Phascolarctos_cinereus
ENSPCOG00000024172	A1CF	100	75.733	ENSPFOG00000006683	a1cf	100	76.547	Poecilia_formosa
ENSPCOG00000024172	A1CF	100	75.570	ENSPFOG00000007437	-	100	76.384	Poecilia_formosa
ENSPCOG00000024172	A1CF	100	74.430	ENSPLAG00000001210	-	100	75.244	Poecilia_latipinna
ENSPCOG00000024172	A1CF	100	74.430	ENSPLAG00000000026	a1cf	100	75.244	Poecilia_latipinna
ENSPCOG00000024172	A1CF	100	67.157	ENSPMEG00000000921	a1cf	100	67.974	Poecilia_mexicana
ENSPCOG00000024172	A1CF	100	68.301	ENSPMEG00000015529	-	100	69.118	Poecilia_mexicana
ENSPCOG00000024172	A1CF	100	75.570	ENSPREG00000016298	a1cf	100	76.384	Poecilia_reticulata
ENSPCOG00000024172	A1CF	100	95.973	ENSPPYG00000002819	A1CF	100	95.973	Pongo_abelii
ENSPCOG00000024172	A1CF	80	72.574	ENSPCAG00000006463	A1CF	70	87.755	Procavia_capensis
ENSPCOG00000024172	A1CF	100	76.509	ENSPNYG00000017944	a1cf	100	76.835	Pundamilia_nyererei
ENSPCOG00000024172	A1CF	100	79.636	ENSPNAG00000007704	a1cf	100	78.477	Pygocentrus_nattereri
ENSPCOG00000024172	A1CF	100	91.443	ENSRNOG00000033195	A1cf	100	90.940	Rattus_norvegicus
ENSPCOG00000024172	A1CF	100	89.465	ENSRBIG00000042892	A1CF	100	92.383	Rhinopithecus_bieti
ENSPCOG00000024172	A1CF	100	96.644	ENSRROG00000041398	A1CF	100	96.644	Rhinopithecus_roxellana
ENSPCOG00000024172	A1CF	100	96.980	ENSSBOG00000021930	A1CF	100	96.980	Saimiri_boliviensis_boliviensis
ENSPCOG00000024172	A1CF	100	89.782	ENSSHAG00000005096	A1CF	100	89.782	Sarcophilus_harrisii
ENSPCOG00000024172	A1CF	100	78.773	ENSSFOG00015011774	a1cf	100	77.944	Scleropages_formosus
ENSPCOG00000024172	A1CF	100	75.570	ENSSMAG00000013271	a1cf	100	75.081	Scophthalmus_maximus
ENSPCOG00000024172	A1CF	100	76.783	ENSSDUG00000013930	a1cf	100	76.119	Seriola_dumerili
ENSPCOG00000024172	A1CF	100	69.967	ENSSLDG00000004290	a1cf	100	69.637	Seriola_lalandi_dorsalis
ENSPCOG00000024172	A1CF	95	83.069	ENSSARG00000005940	A1CF	96	83.069	Sorex_araneus
ENSPCOG00000024172	A1CF	95	86.842	ENSSPUG00000006797	A1CF	95	86.140	Sphenodon_punctatus
ENSPCOG00000024172	A1CF	100	95.134	ENSSSCG00000010431	A1CF	100	95.134	Sus_scrofa
ENSPCOG00000024172	A1CF	100	86.789	ENSTGUG00000005090	A1CF	100	86.455	Taeniopygia_guttata
ENSPCOG00000024172	A1CF	100	74.430	ENSTRUG00000001982	a1cf	100	73.899	Takifugu_rubripes
ENSPCOG00000024172	A1CF	100	75.000	ENSTNIG00000003580	a1cf	100	74.472	Tetraodon_nigroviridis
ENSPCOG00000024172	A1CF	97	86.505	ENSTTRG00000013190	A1CF	95	86.505	Tursiops_truncatus
ENSPCOG00000024172	A1CF	100	93.624	ENSUAMG00000020065	A1CF	100	93.624	Ursus_americanus
ENSPCOG00000024172	A1CF	100	94.631	ENSUMAG00000011162	A1CF	100	94.463	Ursus_maritimus
ENSPCOG00000024172	A1CF	87	88.868	ENSVPAG00000006130	A1CF	86	88.868	Vicugna_pacos
ENSPCOG00000024172	A1CF	100	93.121	ENSVVUG00000002504	A1CF	100	92.953	Vulpes_vulpes
ENSPCOG00000024172	A1CF	100	77.704	ENSXETG00000006611	a1cf	100	77.704	Xenopus_tropicalis
ENSPCOG00000024172	A1CF	100	75.902	ENSXCOG00000003302	a1cf	100	76.230	Xiphophorus_couchianus
ENSPCOG00000024172	A1CF	100	77.049	ENSXMAG00000016703	a1cf	100	77.377	Xiphophorus_maculatus