EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000024277 (Gene tree)
Gene ID: 105825628
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 40928 bases
Position: chrKQ028286.1:3522588-3563515
Accession: 105825628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000024281	ResIII	PF04851.15	8e-08	1	1
ENSPCOP00000024279	ResIII	PF04851.15	8.2e-08	1	1
ENSPCOP00000024276	ResIII	PF04851.15	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000034960	SBNO1-202	4074	-	ENSPCOP00000024279	1357 (aa)	-	A0A2K6GDH0
ENSPCOT00000034962	SBNO1-203	3819	-	ENSPCOP00000024281	1272 (aa)	-	A0A2K6GDH4
ENSPCOT00000034957	SBNO1-201	5566	XM_012663474	ENSPCOP00000024276	1393 (aa)	XP_012518928	A0A2K6GDG8

Gene Model

Click here to download ENSPCOG00000024277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000024277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000024277	SBNO1	82	52.444	ENSPCOG00000015216	SBNO2	68	67.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000024277	SBNO1	99	99.273	ENSG00000139697	SBNO1	100	98.205	Homo_sapiens
ENSPCOG00000024277	SBNO1	83	83.094	ENSAPOG00000003196	sbno1	98	80.637	Acanthochromis_polyacanthus
ENSPCOG00000024277	SBNO1	100	98.209	ENSAMEG00000015151	SBNO1	100	98.209	Ailuropoda_melanoleuca
ENSPCOG00000024277	SBNO1	99	81.802	ENSACIG00000008088	sbno1	95	81.802	Amphilophus_citrinellus
ENSPCOG00000024277	SBNO1	99	82.734	ENSAOCG00000014859	sbno1	99	75.123	Amphiprion_ocellaris
ENSPCOG00000024277	SBNO1	99	82.734	ENSAPEG00000006069	sbno1	99	75.123	Amphiprion_percula
ENSPCOG00000024277	SBNO1	99	84.517	ENSATEG00000006667	sbno1	95	84.517	Anabas_testudineus
ENSPCOG00000024277	SBNO1	99	95.091	ENSAPLG00000015674	SBNO1	100	92.468	Anas_platyrhynchos
ENSPCOG00000024277	SBNO1	99	94.364	ENSACAG00000015441	SBNO1	88	89.431	Anolis_carolinensis
ENSPCOG00000024277	SBNO1	100	97.863	ENSANAG00000029958	-	100	97.863	Aotus_nancymaae
ENSPCOG00000024277	SBNO1	99	75.809	ENSACLG00000024913	sbno1	99	75.897	Astatotilapia_calliptera
ENSPCOG00000024277	SBNO1	99	86.703	ENSAMXG00000019473	sbno1	95	86.703	Astyanax_mexicanus
ENSPCOG00000024277	SBNO1	99	98.491	ENSBTAG00000020505	SBNO1	99	98.491	Bos_taurus
ENSPCOG00000024277	SBNO1	99	99.091	ENSCJAG00000016599	SBNO1	100	97.990	Callithrix_jacchus
ENSPCOG00000024277	SBNO1	100	98.351	ENSCAFG00000007503	SBNO1	100	98.351	Canis_familiaris
ENSPCOG00000024277	SBNO1	100	97.631	ENSCAFG00020015363	SBNO1	100	97.631	Canis_lupus_dingo
ENSPCOG00000024277	SBNO1	99	98.361	ENSCHIG00000008382	SBNO1	99	98.276	Capra_hircus
ENSPCOG00000024277	SBNO1	100	98.747	ENSTSYG00000012749	SBNO1	100	98.747	Carlito_syrichta
ENSPCOG00000024277	SBNO1	96	98.909	ENSCAPG00000000384	SBNO1	100	98.047	Cavia_aperea
ENSPCOG00000024277	SBNO1	99	98.909	ENSCPOG00000008109	SBNO1	100	98.043	Cavia_porcellus
ENSPCOG00000024277	SBNO1	99	95.129	ENSCCAG00000035316	SBNO1	100	93.615	Cebus_capucinus
ENSPCOG00000024277	SBNO1	99	99.273	ENSCATG00000008239	SBNO1	98	99.277	Cercocebus_atys
ENSPCOG00000024277	SBNO1	99	99.091	ENSCLAG00000008995	SBNO1	100	98.221	Chinchilla_lanigera
ENSPCOG00000024277	SBNO1	85	98.877	ENSCSAG00000002064	SBNO1	100	98.877	Chlorocebus_sabaeus
ENSPCOG00000024277	SBNO1	95	98.985	ENSCHOG00000008814	SBNO1	96	94.615	Choloepus_hoffmanni
ENSPCOG00000024277	SBNO1	99	95.091	ENSCPBG00000025968	SBNO1	99	92.468	Chrysemys_picta_bellii
ENSPCOG00000024277	SBNO1	100	92.760	ENSCANG00000042688	-	100	92.688	Colobus_angolensis_palliatus
ENSPCOG00000024277	SBNO1	100	97.416	ENSCGRG00001017470	Sbno1	100	97.416	Cricetulus_griseus_chok1gshd
ENSPCOG00000024277	SBNO1	100	97.416	ENSCGRG00000004756	Sbno1	100	97.416	Cricetulus_griseus_crigri
ENSPCOG00000024277	SBNO1	99	83.060	ENSCSEG00000011919	sbno1	95	83.060	Cynoglossus_semilaevis
ENSPCOG00000024277	SBNO1	99	83.607	ENSCVAG00000007038	sbno1	95	83.607	Cyprinodon_variegatus
ENSPCOG00000024277	SBNO1	99	86.996	ENSDARG00000099080	sbno1	95	86.996	Danio_rerio
ENSPCOG00000024277	SBNO1	100	97.531	ENSDNOG00000017147	SBNO1	98	98.253	Dasypus_novemcinctus
ENSPCOG00000024277	SBNO1	99	98.727	ENSDORG00000015261	Sbno1	95	98.727	Dipodomys_ordii
ENSPCOG00000024277	SBNO1	93	90.596	ENSETEG00000005620	SBNO1	93	90.596	Echinops_telfairi
ENSPCOG00000024277	SBNO1	72	88.083	ENSEBUG00000013823	sbno1	85	88.083	Eptatretus_burgeri
ENSPCOG00000024277	SBNO1	54	97.222	ENSEASG00005012595	-	92	99.407	Equus_asinus_asinus
ENSPCOG00000024277	SBNO1	100	98.780	ENSECAG00000006127	SBNO1	100	98.780	Equus_caballus
ENSPCOG00000024277	SBNO1	83	97.802	ENSEEUG00000003793	SBNO1	83	97.802	Erinaceus_europaeus
ENSPCOG00000024277	SBNO1	99	86.885	ENSELUG00000002886	sbno1	97	86.885	Esox_lucius
ENSPCOG00000024277	SBNO1	99	98.907	ENSFCAG00000015331	SBNO1	99	98.707	Felis_catus
ENSPCOG00000024277	SBNO1	99	95.273	ENSFALG00000009273	SBNO1	100	92.253	Ficedula_albicollis
ENSPCOG00000024277	SBNO1	99	96.049	ENSFDAG00000014232	SBNO1	99	96.049	Fukomys_damarensis
ENSPCOG00000024277	SBNO1	99	82.562	ENSFHEG00000007360	sbno1	96	82.562	Fundulus_heteroclitus
ENSPCOG00000024277	SBNO1	96	83.485	ENSGMOG00000018229	sbno1	94	83.485	Gadus_morhua
ENSPCOG00000024277	SBNO1	86	96.907	ENSGALG00000003392	SBNO1	99	92.532	Gallus_gallus
ENSPCOG00000024277	SBNO1	99	83.971	ENSGAFG00000003960	sbno1	99	77.197	Gambusia_affinis
ENSPCOG00000024277	SBNO1	96	84.191	ENSGACG00000015633	sbno1	94	84.191	Gasterosteus_aculeatus
ENSPCOG00000024277	SBNO1	99	95.273	ENSGAGG00000001065	SBNO1	99	95.118	Gopherus_agassizii
ENSPCOG00000024277	SBNO1	99	99.273	ENSGGOG00000015000	SBNO1	100	98.399	Gorilla_gorilla
ENSPCOG00000024277	SBNO1	99	69.985	ENSHBUG00000011910	sbno1	99	70.168	Haplochromis_burtoni
ENSPCOG00000024277	SBNO1	99	98.909	ENSHGLG00000014165	-	99	98.915	Heterocephalus_glaber_female
ENSPCOG00000024277	SBNO1	93	84.585	ENSHCOG00000003246	sbno1	95	84.585	Hippocampus_comes
ENSPCOG00000024277	SBNO1	99	84.875	ENSIPUG00000015830	Sbno1	94	84.875	Ictalurus_punctatus
ENSPCOG00000024277	SBNO1	100	98.452	ENSSTOG00000023221	SBNO1	100	98.452	Ictidomys_tridecemlineatus
ENSPCOG00000024277	SBNO1	99	98.909	ENSJJAG00000001741	Sbno1	100	97.703	Jaculus_jaculus
ENSPCOG00000024277	SBNO1	99	84.066	ENSKMAG00000009696	sbno1	95	84.066	Kryptolebias_marmoratus
ENSPCOG00000024277	SBNO1	99	84.532	ENSLBEG00000007623	sbno1	96	84.532	Labrus_bergylta
ENSPCOG00000024277	SBNO1	99	81.571	ENSLACG00000017227	SBNO1	93	91.512	Latimeria_chalumnae
ENSPCOG00000024277	SBNO1	99	87.321	ENSLOCG00000005725	sbno1	95	87.321	Lepisosteus_oculatus
ENSPCOG00000024277	SBNO1	99	98.545	ENSLAFG00000002135	SBNO1	100	97.416	Loxodonta_africana
ENSPCOG00000024277	SBNO1	99	99.273	ENSMFAG00000031429	SBNO1	100	98.062	Macaca_fascicularis
ENSPCOG00000024277	SBNO1	99	99.273	ENSMMUG00000011496	SBNO1	100	98.062	Macaca_mulatta
ENSPCOG00000024277	SBNO1	99	99.273	ENSMLEG00000033260	SBNO1	99	99.277	Mandrillus_leucophaeus
ENSPCOG00000024277	SBNO1	99	84.699	ENSMAMG00000005473	sbno1	95	84.699	Mastacembelus_armatus
ENSPCOG00000024277	SBNO1	99	95.455	ENSMGAG00000003274	SBNO1	100	92.396	Meleagris_gallopavo
ENSPCOG00000024277	SBNO1	52	98.033	ENSMAUG00000004834	-	100	97.738	Mesocricetus_auratus
ENSPCOG00000024277	SBNO1	100	98.062	ENSMICG00000006573	-	100	98.062	Microcebus_murinus
ENSPCOG00000024277	SBNO1	100	97.327	ENSMOCG00000009390	Sbno1	100	97.509	Microtus_ochrogaster
ENSPCOG00000024277	SBNO1	99	83.273	ENSMMOG00000008691	sbno1	94	83.273	Mola_mola
ENSPCOG00000024277	SBNO1	99	97.086	ENSMODG00000012470	SBNO1	98	95.259	Monodelphis_domestica
ENSPCOG00000024277	SBNO1	99	82.554	ENSMALG00000001056	sbno1	99	75.315	Monopterus_albus
ENSPCOG00000024277	SBNO1	99	99.271	MGP_CAROLIEiJ_G0027749	Sbno1	100	97.738	Mus_caroli
ENSPCOG00000024277	SBNO1	99	99.271	ENSMUSG00000038095	Sbno1	100	98.039	Mus_musculus
ENSPCOG00000024277	SBNO1	99	98.907	MGP_PahariEiJ_G0024329	Sbno1	100	97.738	Mus_pahari
ENSPCOG00000024277	SBNO1	99	99.271	MGP_SPRETEiJ_G0028747	Sbno1	100	98.039	Mus_spretus
ENSPCOG00000024277	SBNO1	100	98.564	ENSMPUG00000001658	SBNO1	100	98.564	Mustela_putorius_furo
ENSPCOG00000024277	SBNO1	100	98.134	ENSMLUG00000017159	SBNO1	100	98.134	Myotis_lucifugus
ENSPCOG00000024277	SBNO1	100	98.421	ENSNGAG00000012620	Sbno1	100	98.421	Nannospalax_galili
ENSPCOG00000024277	SBNO1	99	75.753	ENSNBRG00000019189	sbno1	99	75.842	Neolamprologus_brichardi
ENSPCOG00000024277	SBNO1	100	94.326	ENSNLEG00000001502	SBNO1	100	94.326	Nomascus_leucogenys
ENSPCOG00000024277	SBNO1	60	96.667	ENSMEUG00000008768	-	93	89.873	Notamacropus_eugenii
ENSPCOG00000024277	SBNO1	99	97.096	ENSOPRG00000011054	SBNO1	100	94.194	Ochotona_princeps
ENSPCOG00000024277	SBNO1	99	98.909	ENSODEG00000009997	SBNO1	100	97.642	Octodon_degus
ENSPCOG00000024277	SBNO1	99	83.883	ENSONIG00000015348	sbno1	95	83.883	Oreochromis_niloticus
ENSPCOG00000024277	SBNO1	98	96.499	ENSOCUG00000002441	SBNO1	95	96.499	Oryctolagus_cuniculus
ENSPCOG00000024277	SBNO1	99	82.696	ENSORLG00000001593	sbno1	95	82.696	Oryzias_latipes
ENSPCOG00000024277	SBNO1	99	82.514	ENSORLG00020015216	sbno1	95	82.514	Oryzias_latipes_hni
ENSPCOG00000024277	SBNO1	99	82.696	ENSORLG00015002726	sbno1	95	82.696	Oryzias_latipes_hsok
ENSPCOG00000024277	SBNO1	99	82.815	ENSOMEG00000019313	sbno1	95	82.815	Oryzias_melastigma
ENSPCOG00000024277	SBNO1	52	95.613	ENSOGAG00000010781	-	100	95.331	Otolemur_garnettii
ENSPCOG00000024277	SBNO1	99	98.361	ENSOARG00000004404	SBNO1	99	98.063	Ovis_aries
ENSPCOG00000024277	SBNO1	100	98.231	ENSPPAG00000024635	SBNO1	100	98.231	Pan_paniscus
ENSPCOG00000024277	SBNO1	99	98.907	ENSPPRG00000022092	SBNO1	99	98.707	Panthera_pardus
ENSPCOG00000024277	SBNO1	100	98.421	ENSPTIG00000017803	SBNO1	100	98.421	Panthera_tigris_altaica
ENSPCOG00000024277	SBNO1	100	98.305	ENSPTRG00000005597	SBNO1	100	98.399	Pan_troglodytes
ENSPCOG00000024277	SBNO1	99	99.273	ENSPANG00000011640	SBNO1	99	99.277	Papio_anubis
ENSPCOG00000024277	SBNO1	99	86.496	ENSPKIG00000001441	sbno1	95	86.496	Paramormyrops_kingsleyae
ENSPCOG00000024277	SBNO1	90	91.572	ENSPSIG00000009256	-	100	88.190	Pelodiscus_sinensis
ENSPCOG00000024277	SBNO1	99	94.727	ENSPSIG00000009572	-	100	91.753	Pelodiscus_sinensis
ENSPCOG00000024277	SBNO1	100	97.272	ENSPEMG00000016087	Sbno1	100	97.272	Peromyscus_maniculatus_bairdii
ENSPCOG00000024277	SBNO1	99	96.721	ENSPCIG00000010985	SBNO1	99	94.831	Phascolarctos_cinereus
ENSPCOG00000024277	SBNO1	99	83.971	ENSPFOG00000005069	sbno1	95	83.971	Poecilia_formosa
ENSPCOG00000024277	SBNO1	99	83.971	ENSPLAG00000015015	sbno1	95	83.971	Poecilia_latipinna
ENSPCOG00000024277	SBNO1	99	83.971	ENSPMEG00000021212	sbno1	95	83.971	Poecilia_mexicana
ENSPCOG00000024277	SBNO1	99	83.607	ENSPREG00000017746	sbno1	95	83.607	Poecilia_reticulata
ENSPCOG00000024277	SBNO1	99	99.273	ENSPPYG00000005084	SBNO1	100	97.846	Pongo_abelii
ENSPCOG00000024277	SBNO1	89	92.603	ENSPCAG00000008634	SBNO1	88	92.700	Procavia_capensis
ENSPCOG00000024277	SBNO1	92	98.810	ENSPVAG00000015304	SBNO1	87	98.810	Pteropus_vampyrus
ENSPCOG00000024277	SBNO1	99	83.516	ENSPNYG00000004291	sbno1	95	83.516	Pundamilia_nyererei
ENSPCOG00000024277	SBNO1	99	87.614	ENSPNAG00000015622	sbno1	95	87.614	Pygocentrus_nattereri
ENSPCOG00000024277	SBNO1	99	99.089	ENSRNOG00000001064	Sbno1	99	98.217	Rattus_norvegicus
ENSPCOG00000024277	SBNO1	99	99.273	ENSRROG00000034230	SBNO1	99	99.277	Rhinopithecus_roxellana
ENSPCOG00000024277	SBNO1	97	92.372	ENSSBOG00000015422	SBNO1	100	92.857	Saimiri_boliviensis_boliviensis
ENSPCOG00000024277	SBNO1	99	86.314	ENSSFOG00015019025	sbno1	95	86.314	Scleropages_formosus
ENSPCOG00000024277	SBNO1	99	82.734	ENSSMAG00000013640	sbno1	96	82.734	Scophthalmus_maximus
ENSPCOG00000024277	SBNO1	99	84.882	ENSSDUG00000023480	sbno1	95	84.882	Seriola_dumerili
ENSPCOG00000024277	SBNO1	99	84.882	ENSSLDG00000007928	sbno1	95	84.882	Seriola_lalandi_dorsalis
ENSPCOG00000024277	SBNO1	90	98.364	ENSSARG00000002594	SBNO1	89	98.058	Sorex_araneus
ENSPCOG00000024277	SBNO1	99	94.000	ENSSPUG00000012640	SBNO1	100	91.679	Sphenodon_punctatus
ENSPCOG00000024277	SBNO1	99	83.242	ENSSPAG00000016244	sbno1	95	83.242	Stegastes_partitus
ENSPCOG00000024277	SBNO1	100	98.675	ENSSSCG00000009776	SBNO1	100	98.675	Sus_scrofa
ENSPCOG00000024277	SBNO1	99	95.455	ENSTGUG00000005380	SBNO1	100	92.181	Taeniopygia_guttata
ENSPCOG00000024277	SBNO1	99	83.514	ENSTRUG00000018490	sbno1	96	83.005	Takifugu_rubripes
ENSPCOG00000024277	SBNO1	56	70.654	ENSTNIG00000013506	sbno1	99	70.756	Tetraodon_nigroviridis
ENSPCOG00000024277	SBNO1	100	98.492	ENSUAMG00000019671	SBNO1	100	98.492	Ursus_americanus
ENSPCOG00000024277	SBNO1	100	98.492	ENSUMAG00000004002	SBNO1	100	98.492	Ursus_maritimus
ENSPCOG00000024277	SBNO1	95	93.478	ENSVPAG00000007024	SBNO1	95	93.478	Vicugna_pacos
ENSPCOG00000024277	SBNO1	100	98.564	ENSVVUG00000027807	SBNO1	100	98.564	Vulpes_vulpes
ENSPCOG00000024277	SBNO1	99	92.883	ENSXETG00000031930	SBNO1	94	92.883	Xenopus_tropicalis
ENSPCOG00000024277	SBNO1	86	85.942	ENSXCOG00000011607	sbno1	90	85.714	Xiphophorus_couchianus
ENSPCOG00000024277	SBNO1	99	83.607	ENSXMAG00000002140	sbno1	95	83.607	Xiphophorus_maculatus