EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000024360 (Gene tree)
Gene ID: 105825976
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 31775 bases
Position: chrKQ028619.1:1606216-1637990
Accession: 105825976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000024330	TruB_N	PF01509.18	2.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000035011	TRUB1-201	993	XM_012663876	ENSPCOP00000024330	330 (aa)	XP_012519330	A0A2K6GDM5

Gene Model

Click here to download ENSPCOG00000024360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000024360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000024360	TRUB1	99	90.258	ENSG00000165832	TRUB1	99	90.258	Homo_sapiens
ENSPCOG00000024360	TRUB1	68	62.041	ENSAPOG00000020565	trub1	89	62.602	Acanthochromis_polyacanthus
ENSPCOG00000024360	TRUB1	96	88.724	ENSAMEG00000014931	TRUB1	99	88.604	Ailuropoda_melanoleuca
ENSPCOG00000024360	TRUB1	81	57.092	ENSACIG00000003060	trub1	94	57.092	Amphilophus_citrinellus
ENSPCOG00000024360	TRUB1	68	64.135	ENSAOCG00000017188	trub1	89	62.602	Amphiprion_ocellaris
ENSPCOG00000024360	TRUB1	69	61.382	ENSAPEG00000015209	trub1	89	62.195	Amphiprion_percula
ENSPCOG00000024360	TRUB1	67	63.485	ENSATEG00000023291	trub1	86	63.485	Anabas_testudineus
ENSPCOG00000024360	TRUB1	78	71.636	ENSAPLG00000006808	TRUB1	99	71.636	Anas_platyrhynchos
ENSPCOG00000024360	TRUB1	76	67.286	ENSACAG00000009282	TRUB1	97	67.286	Anolis_carolinensis
ENSPCOG00000024360	TRUB1	95	90.719	ENSANAG00000022870	TRUB1	99	89.112	Aotus_nancymaae
ENSPCOG00000024360	TRUB1	71	60.714	ENSACLG00000000823	trub1	91	61.508	Astatotilapia_calliptera
ENSPCOG00000024360	TRUB1	76	60.000	ENSAMXG00000015845	trub1	90	60.000	Astyanax_mexicanus
ENSPCOG00000024360	TRUB1	98	87.755	ENSBTAG00000012955	TRUB1	100	87.500	Bos_taurus
ENSPCOG00000024360	TRUB1	99	89.143	ENSCJAG00000047815	TRUB1	99	89.143	Callithrix_jacchus
ENSPCOG00000024360	TRUB1	100	88.286	ENSCAFG00000011688	TRUB1	100	88.286	Canis_familiaris
ENSPCOG00000024360	TRUB1	100	88.571	ENSCAFG00020013237	TRUB1	100	88.571	Canis_lupus_dingo
ENSPCOG00000024360	TRUB1	86	90.397	ENSCHIG00000020884	TRUB1	100	87.464	Capra_hircus
ENSPCOG00000024360	TRUB1	99	84.046	ENSTSYG00000000446	TRUB1	99	84.615	Carlito_syrichta
ENSPCOG00000024360	TRUB1	71	78.261	ENSCAPG00000017088	TRUB1	99	78.261	Cavia_aperea
ENSPCOG00000024360	TRUB1	68	78.689	ENSCPOG00000040236	-	100	78.689	Cavia_porcellus
ENSPCOG00000024360	TRUB1	69	73.684	ENSCPOG00000030129	-	86	72.065	Cavia_porcellus
ENSPCOG00000024360	TRUB1	96	89.851	ENSCCAG00000028842	TRUB1	99	88.286	Cebus_capucinus
ENSPCOG00000024360	TRUB1	99	90.258	ENSCATG00000033431	TRUB1	99	90.258	Cercocebus_atys
ENSPCOG00000024360	TRUB1	68	82.787	ENSCLAG00000008664	TRUB1	100	82.787	Chinchilla_lanigera
ENSPCOG00000024360	TRUB1	99	90.544	ENSCSAG00000004891	TRUB1	99	90.544	Chlorocebus_sabaeus
ENSPCOG00000024360	TRUB1	100	73.143	ENSCHOG00000011931	TRUB1	100	73.143	Choloepus_hoffmanni
ENSPCOG00000024360	TRUB1	77	74.632	ENSCPBG00000003051	TRUB1	94	74.632	Chrysemys_picta_bellii
ENSPCOG00000024360	TRUB1	99	90.544	ENSCANG00000029445	TRUB1	99	90.544	Colobus_angolensis_palliatus
ENSPCOG00000024360	TRUB1	72	80.000	ENSCGRG00001016772	-	90	72.819	Cricetulus_griseus_chok1gshd
ENSPCOG00000024360	TRUB1	79	73.665	ENSCGRG00001010322	-	80	73.898	Cricetulus_griseus_chok1gshd
ENSPCOG00000024360	TRUB1	79	81.851	ENSCGRG00000010806	Trub1	91	81.544	Cricetulus_griseus_crigri
ENSPCOG00000024360	TRUB1	72	56.641	ENSCSEG00000011261	trub1	83	57.422	Cynoglossus_semilaevis
ENSPCOG00000024360	TRUB1	68	61.224	ENSCVAG00000008791	trub1	79	60.078	Cyprinodon_variegatus
ENSPCOG00000024360	TRUB1	74	60.456	ENSDARG00000053805	trub1	90	60.456	Danio_rerio
ENSPCOG00000024360	TRUB1	97	82.647	ENSDNOG00000001069	TRUB1	100	82.051	Dasypus_novemcinctus
ENSPCOG00000024360	TRUB1	98	85.174	ENSDORG00000010431	Trub1	98	84.593	Dipodomys_ordii
ENSPCOG00000024360	TRUB1	78	75.000	ENSETEG00000009183	TRUB1	80	74.074	Echinops_telfairi
ENSPCOG00000024360	TRUB1	96	88.988	ENSEASG00005014739	TRUB1	100	88.857	Equus_asinus_asinus
ENSPCOG00000024360	TRUB1	96	88.988	ENSECAG00000007177	TRUB1	100	88.857	Equus_caballus
ENSPCOG00000024360	TRUB1	99	71.508	ENSEEUG00000013993	TRUB1	83	76.589	Erinaceus_europaeus
ENSPCOG00000024360	TRUB1	68	63.673	ENSELUG00000000502	trub1	86	63.673	Esox_lucius
ENSPCOG00000024360	TRUB1	85	91.000	ENSFCAG00000031927	TRUB1	99	88.761	Felis_catus
ENSPCOG00000024360	TRUB1	67	70.417	ENSFALG00000002232	TRUB1	92	70.417	Ficedula_albicollis
ENSPCOG00000024360	TRUB1	68	80.738	ENSFDAG00000008140	TRUB1	100	80.738	Fukomys_damarensis
ENSPCOG00000024360	TRUB1	68	60.408	ENSFHEG00000004016	trub1	84	61.224	Fundulus_heteroclitus
ENSPCOG00000024360	TRUB1	77	70.221	ENSGALG00000009091	TRUB1	99	70.233	Gallus_gallus
ENSPCOG00000024360	TRUB1	67	60.000	ENSGAFG00000009193	trub1	86	59.426	Gambusia_affinis
ENSPCOG00000024360	TRUB1	53	60.513	ENSGACG00000015387	trub1	96	61.538	Gasterosteus_aculeatus
ENSPCOG00000024360	TRUB1	88	68.932	ENSGAGG00000009758	TRUB1	81	73.239	Gopherus_agassizii
ENSPCOG00000024360	TRUB1	99	91.117	ENSGGOG00000004583	TRUB1	99	91.117	Gorilla_gorilla
ENSPCOG00000024360	TRUB1	71	60.714	ENSHBUG00000016787	trub1	91	61.508	Haplochromis_burtoni
ENSPCOG00000024360	TRUB1	100	82.521	ENSHGLG00000015314	TRUB1	100	82.521	Heterocephalus_glaber_female
ENSPCOG00000024360	TRUB1	68	79.098	ENSHGLG00100009183	TRUB1	100	79.098	Heterocephalus_glaber_male
ENSPCOG00000024360	TRUB1	68	62.041	ENSHCOG00000017877	trub1	89	62.857	Hippocampus_comes
ENSPCOG00000024360	TRUB1	78	59.058	ENSIPUG00000017559	trub1	98	58.993	Ictalurus_punctatus
ENSPCOG00000024360	TRUB1	86	89.735	ENSSTOG00000003641	TRUB1	100	83.429	Ictidomys_tridecemlineatus
ENSPCOG00000024360	TRUB1	85	85.667	ENSJJAG00000011800	Trub1	88	85.667	Jaculus_jaculus
ENSPCOG00000024360	TRUB1	71	59.533	ENSKMAG00000006232	trub1	92	60.311	Kryptolebias_marmoratus
ENSPCOG00000024360	TRUB1	75	58.271	ENSLBEG00000026722	trub1	92	59.023	Labrus_bergylta
ENSPCOG00000024360	TRUB1	78	67.391	ENSLACG00000014885	TRUB1	92	67.391	Latimeria_chalumnae
ENSPCOG00000024360	TRUB1	77	65.568	ENSLOCG00000012979	trub1	93	65.568	Lepisosteus_oculatus
ENSPCOG00000024360	TRUB1	99	74.230	ENSLAFG00000015452	TRUB1	99	75.630	Loxodonta_africana
ENSPCOG00000024360	TRUB1	99	90.544	ENSMFAG00000031767	TRUB1	99	90.544	Macaca_fascicularis
ENSPCOG00000024360	TRUB1	99	90.544	ENSMMUG00000001902	TRUB1	99	90.544	Macaca_mulatta
ENSPCOG00000024360	TRUB1	99	93.215	ENSMNEG00000044646	TRUB1	99	93.215	Macaca_nemestrina
ENSPCOG00000024360	TRUB1	99	90.258	ENSMLEG00000042655	TRUB1	99	90.258	Mandrillus_leucophaeus
ENSPCOG00000024360	TRUB1	71	60.714	ENSMZEG00005024095	trub1	91	61.508	Maylandia_zebra
ENSPCOG00000024360	TRUB1	77	69.485	ENSMGAG00000011135	TRUB1	93	69.485	Meleagris_gallopavo
ENSPCOG00000024360	TRUB1	85	78.930	ENSMAUG00000011101	Trub1	89	79.070	Mesocricetus_auratus
ENSPCOG00000024360	TRUB1	100	92.837	ENSMICG00000016324	TRUB1	100	92.837	Microcebus_murinus
ENSPCOG00000024360	TRUB1	93	77.064	ENSMOCG00000017759	Trub1	91	81.605	Microtus_ochrogaster
ENSPCOG00000024360	TRUB1	80	77.032	ENSMODG00000009676	TRUB1	81	75.427	Monodelphis_domestica
ENSPCOG00000024360	TRUB1	100	76.504	MGP_CAROLIEiJ_G0023100	Trub1	89	80.795	Mus_caroli
ENSPCOG00000024360	TRUB1	100	75.358	ENSMUSG00000025086	Trub1	89	79.801	Mus_musculus
ENSPCOG00000024360	TRUB1	100	76.791	MGP_PahariEiJ_G0014588	Trub1	89	81.126	Mus_pahari
ENSPCOG00000024360	TRUB1	100	75.645	MGP_SPRETEiJ_G0024021	Trub1	89	80.132	Mus_spretus
ENSPCOG00000024360	TRUB1	85	92.027	ENSMPUG00000003556	TRUB1	99	89.398	Mustela_putorius_furo
ENSPCOG00000024360	TRUB1	95	83.832	ENSMLUG00000017686	TRUB1	99	82.000	Myotis_lucifugus
ENSPCOG00000024360	TRUB1	100	81.429	ENSNGAG00000018682	Trub1	100	81.429	Nannospalax_galili
ENSPCOG00000024360	TRUB1	69	61.789	ENSNBRG00000023393	trub1	88	62.602	Neolamprologus_brichardi
ENSPCOG00000024360	TRUB1	96	90.746	ENSNLEG00000016345	TRUB1	99	90.258	Nomascus_leucogenys
ENSPCOG00000024360	TRUB1	55	81.592	ENSMEUG00000006603	TRUB1	78	79.147	Notamacropus_eugenii
ENSPCOG00000024360	TRUB1	86	81.126	ENSOPRG00000009371	TRUB1	88	81.126	Ochotona_princeps
ENSPCOG00000024360	TRUB1	99	80.172	ENSODEG00000010854	TRUB1	99	80.172	Octodon_degus
ENSPCOG00000024360	TRUB1	69	60.976	ENSONIG00000007249	trub1	89	61.789	Oreochromis_niloticus
ENSPCOG00000024360	TRUB1	77	75.182	ENSOANG00000001556	TRUB1	93	73.145	Ornithorhynchus_anatinus
ENSPCOG00000024360	TRUB1	86	84.437	ENSOCUG00000009456	TRUB1	87	84.437	Oryctolagus_cuniculus
ENSPCOG00000024360	TRUB1	67	62.241	ENSORLG00000029719	trub1	86	63.071	Oryzias_latipes
ENSPCOG00000024360	TRUB1	67	61.826	ENSORLG00020016767	trub1	86	62.397	Oryzias_latipes_hni
ENSPCOG00000024360	TRUB1	67	61.826	ENSORLG00015014728	trub1	87	62.397	Oryzias_latipes_hsok
ENSPCOG00000024360	TRUB1	73	59.846	ENSOMEG00000014556	trub1	90	60.700	Oryzias_melastigma
ENSPCOG00000024360	TRUB1	100	90.000	ENSOGAG00000015895	TRUB1	100	90.000	Otolemur_garnettii
ENSPCOG00000024360	TRUB1	84	87.789	ENSOARG00000015591	TRUB1	100	83.473	Ovis_aries
ENSPCOG00000024360	TRUB1	99	90.831	ENSPPAG00000043645	TRUB1	99	90.831	Pan_paniscus
ENSPCOG00000024360	TRUB1	95	88.323	ENSPPRG00000007096	TRUB1	99	88.184	Panthera_pardus
ENSPCOG00000024360	TRUB1	95	88.623	ENSPTIG00000006378	TRUB1	99	88.473	Panthera_tigris_altaica
ENSPCOG00000024360	TRUB1	99	90.831	ENSPTRG00000002964	TRUB1	99	90.831	Pan_troglodytes
ENSPCOG00000024360	TRUB1	99	90.258	ENSPANG00000020712	TRUB1	99	90.258	Papio_anubis
ENSPCOG00000024360	TRUB1	77	72.426	ENSPSIG00000012877	TRUB1	93	72.426	Pelodiscus_sinensis
ENSPCOG00000024360	TRUB1	68	60.000	ENSPMGG00000000075	trub1	88	60.816	Periophthalmus_magnuspinnatus
ENSPCOG00000024360	TRUB1	85	79.734	ENSPEMG00000011156	Trub1	89	79.734	Peromyscus_maniculatus_bairdii
ENSPCOG00000024360	TRUB1	80	76.325	ENSPCIG00000009729	TRUB1	79	75.433	Phascolarctos_cinereus
ENSPCOG00000024360	TRUB1	68	60.000	ENSPFOG00000009950	trub1	90	60.000	Poecilia_formosa
ENSPCOG00000024360	TRUB1	68	60.000	ENSPLAG00000013855	trub1	86	60.000	Poecilia_latipinna
ENSPCOG00000024360	TRUB1	68	60.000	ENSPMEG00000009064	trub1	88	60.000	Poecilia_mexicana
ENSPCOG00000024360	TRUB1	68	60.816	ENSPREG00000003343	trub1	88	60.816	Poecilia_reticulata
ENSPCOG00000024360	TRUB1	96	91.045	ENSPPYG00000002676	TRUB1	99	90.544	Pongo_abelii
ENSPCOG00000024360	TRUB1	99	70.170	ENSPCAG00000008427	TRUB1	99	71.023	Procavia_capensis
ENSPCOG00000024360	TRUB1	74	85.932	ENSPVAG00000007575	TRUB1	100	85.932	Pteropus_vampyrus
ENSPCOG00000024360	TRUB1	71	60.714	ENSPNYG00000018614	trub1	91	61.508	Pundamilia_nyererei
ENSPCOG00000024360	TRUB1	77	58.661	ENSPNAG00000006881	trub1	88	58.661	Pygocentrus_nattereri
ENSPCOG00000024360	TRUB1	100	76.791	ENSRNOG00000017321	Trub1	89	81.126	Rattus_norvegicus
ENSPCOG00000024360	TRUB1	99	80.229	ENSRBIG00000033423	TRUB1	99	80.229	Rhinopithecus_bieti
ENSPCOG00000024360	TRUB1	99	89.971	ENSRROG00000033902	TRUB1	99	89.971	Rhinopithecus_roxellana
ENSPCOG00000024360	TRUB1	96	90.149	ENSSBOG00000024237	TRUB1	99	88.571	Saimiri_boliviensis_boliviensis
ENSPCOG00000024360	TRUB1	70	74.308	ENSSHAG00000009346	TRUB1	85	74.308	Sarcophilus_harrisii
ENSPCOG00000024360	TRUB1	68	63.374	ENSSFOG00015022124	trub1	83	64.198	Scleropages_formosus
ENSPCOG00000024360	TRUB1	69	62.195	ENSSMAG00000001020	trub1	88	63.008	Scophthalmus_maximus
ENSPCOG00000024360	TRUB1	67	62.083	ENSSDUG00000016414	trub1	88	63.008	Seriola_dumerili
ENSPCOG00000024360	TRUB1	67	62.500	ENSSLDG00000015486	trub1	88	63.415	Seriola_lalandi_dorsalis
ENSPCOG00000024360	TRUB1	79	71.429	ENSSPUG00000001642	TRUB1	96	71.429	Sphenodon_punctatus
ENSPCOG00000024360	TRUB1	74	60.456	ENSSPAG00000001217	trub1	94	61.217	Stegastes_partitus
ENSPCOG00000024360	TRUB1	100	84.000	ENSSSCG00000010653	TRUB1	100	84.000	Sus_scrofa
ENSPCOG00000024360	TRUB1	76	71.111	ENSTGUG00000010971	TRUB1	97	70.956	Taeniopygia_guttata
ENSPCOG00000024360	TRUB1	71	71.542	ENSTBEG00000002880	TRUB1	99	71.542	Tupaia_belangeri
ENSPCOG00000024360	TRUB1	70	84.000	ENSTTRG00000005767	TRUB1	100	85.985	Tursiops_truncatus
ENSPCOG00000024360	TRUB1	96	90.149	ENSUAMG00000024876	TRUB1	99	89.685	Ursus_americanus
ENSPCOG00000024360	TRUB1	84	91.864	ENSUMAG00000002411	TRUB1	99	85.673	Ursus_maritimus
ENSPCOG00000024360	TRUB1	100	88.857	ENSVPAG00000005507	TRUB1	100	88.857	Vicugna_pacos
ENSPCOG00000024360	TRUB1	100	86.571	ENSVVUG00000010085	TRUB1	84	87.429	Vulpes_vulpes
ENSPCOG00000024360	TRUB1	77	61.765	ENSXETG00000023828	trub1	98	61.765	Xenopus_tropicalis
ENSPCOG00000024360	TRUB1	68	59.259	ENSXCOG00000017847	trub1	86	59.259	Xiphophorus_couchianus
ENSPCOG00000024360	TRUB1	68	59.592	ENSXMAG00000014701	trub1	88	59.592	Xiphophorus_maculatus