EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000025578 (Gene tree)
Gene ID: 105807101
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 1113 bases
Position: chrKQ018620.1:1083679-1084791
Accession: 31955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000026414	RRM_5	PF13893.6	5.6e-14	1	3
ENSPCOP00000026414	RRM_5	PF13893.6	5.6e-14	2	3
ENSPCOP00000026414	RRM_5	PF13893.6	5.6e-14	3	3
ENSPCOP00000026414	RRM_1	PF00076.22	2e-84	1	4
ENSPCOP00000026414	RRM_1	PF00076.22	2e-84	2	4
ENSPCOP00000026414	RRM_1	PF00076.22	2e-84	3	4
ENSPCOP00000026414	RRM_1	PF00076.22	2e-84	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000037159	PABPC4L-201	1113	-	ENSPCOP00000026414	370 (aa)	-	A0A2K6GJP0

Gene Model

Click here to download ENSPCOG00000025578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000025578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000025578	PABPC4L	98	65.565	ENSPCOG00000020630	PABPC1L	62	65.565
ENSPCOG00000025578	PABPC4L	59	42.254	ENSPCOG00000017170	-	93	42.254
ENSPCOG00000025578	PABPC4L	98	62.079	ENSPCOG00000000676	PABPC5	96	62.088
ENSPCOG00000025578	PABPC4L	64	39.474	ENSPCOG00000014346	-	54	39.474
ENSPCOG00000025578	PABPC4L	97	63.545	ENSPCOG00000025882	-	65	56.793
ENSPCOG00000025578	PABPC4L	99	75.543	ENSPCOG00000023725	-	60	75.543
ENSPCOG00000025578	PABPC4L	51	39.683	ENSPCOG00000013607	-	85	39.683
ENSPCOG00000025578	PABPC4L	99	71.038	ENSPCOG00000013197	PABPC3	60	71.038
ENSPCOG00000025578	PABPC4L	96	36.111	ENSPCOG00000018564	RBM23	64	36.111
ENSPCOG00000025578	PABPC4L	98	62.755	ENSPCOG00000026349	-	98	62.755
ENSPCOG00000025578	PABPC4L	98	72.549	ENSPCOG00000020234	PABPC1	67	69.444
ENSPCOG00000025578	PABPC4L	65	30.719	ENSPCOG00000015986	-	55	30.719
ENSPCOG00000025578	PABPC4L	87	31.707	ENSPCOG00000003300	ELAVL1	87	31.707
ENSPCOG00000025578	PABPC4L	95	37.500	ENSPCOG00000025238	-	50	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000025578	PABPC4L	100	95.135	ENSG00000254535	PABPC4L	100	95.135	Homo_sapiens
ENSPCOG00000025578	PABPC4L	100	92.432	ENSANAG00000017199	PABPC4L	87	92.432	Aotus_nancymaae
ENSPCOG00000025578	PABPC4L	99	89.431	ENSBTAG00000046902	PABPC4L	99	89.431	Bos_taurus
ENSPCOG00000025578	PABPC4L	100	92.973	ENSCJAG00000045332	PABPC4L	86	92.973	Callithrix_jacchus
ENSPCOG00000025578	PABPC4L	99	72.011	ENSCAFG00020019182	-	54	72.011	Canis_lupus_dingo
ENSPCOG00000025578	PABPC4L	99	89.431	ENSCHIG00000007231	PABPC4L	99	89.431	Capra_hircus
ENSPCOG00000025578	PABPC4L	98	81.493	ENSCAPG00000000555	PABPC4L	100	81.493	Cavia_aperea
ENSPCOG00000025578	PABPC4L	100	78.919	ENSCPOG00000033167	PABPC4L	100	78.919	Cavia_porcellus
ENSPCOG00000025578	PABPC4L	100	92.703	ENSCCAG00000031681	PABPC4L	86	92.703	Cebus_capucinus
ENSPCOG00000025578	PABPC4L	100	84.054	ENSCLAG00000017628	PABPC4L	100	84.054	Chinchilla_lanigera
ENSPCOG00000025578	PABPC4L	100	92.703	ENSCANG00000037677	PABPC4L	100	92.703	Colobus_angolensis_palliatus
ENSPCOG00000025578	PABPC4L	100	82.162	ENSCGRG00001002070	Pabpc4l	100	82.162	Cricetulus_griseus_chok1gshd
ENSPCOG00000025578	PABPC4L	100	82.162	ENSCGRG00000020086	Pabpc4l	100	82.162	Cricetulus_griseus_crigri
ENSPCOG00000025578	PABPC4L	100	92.162	ENSDNOG00000031077	PABPC4L	95	92.162	Dasypus_novemcinctus
ENSPCOG00000025578	PABPC4L	99	89.160	ENSEASG00005007883	PABPC4L	99	89.160	Equus_asinus_asinus
ENSPCOG00000025578	PABPC4L	99	89.702	ENSECAG00000031416	PABPC4L	99	89.702	Equus_caballus
ENSPCOG00000025578	PABPC4L	99	89.973	ENSFCAG00000028270	PABPC4L	99	89.973	Felis_catus
ENSPCOG00000025578	PABPC4L	99	82.927	ENSFDAG00000019606	PABPC4L	99	82.927	Fukomys_damarensis
ENSPCOG00000025578	PABPC4L	100	94.595	ENSGGOG00000024991	PABPC4L	100	94.595	Gorilla_gorilla
ENSPCOG00000025578	PABPC4L	99	83.198	ENSHGLG00000020104	PABPC4L	99	83.198	Heterocephalus_glaber_female
ENSPCOG00000025578	PABPC4L	99	83.198	ENSHGLG00100020648	PABPC4L	99	83.198	Heterocephalus_glaber_male
ENSPCOG00000025578	PABPC4L	100	87.062	ENSSTOG00000019472	PABPC4L	99	87.062	Ictidomys_tridecemlineatus
ENSPCOG00000025578	PABPC4L	99	82.927	ENSJJAG00000004090	Pabpc4l	99	82.927	Jaculus_jaculus
ENSPCOG00000025578	PABPC4L	100	82.162	ENSMAUG00000016313	Pabpc4l	100	82.162	Mesocricetus_auratus
ENSPCOG00000025578	PABPC4L	100	98.108	ENSMICG00000029683	PABPC4L	100	98.108	Microcebus_murinus
ENSPCOG00000025578	PABPC4L	100	83.784	ENSMOCG00000007551	Pabpc4l	100	83.784	Microtus_ochrogaster
ENSPCOG00000025578	PABPC4L	100	80.541	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	80.541	Mus_caroli
ENSPCOG00000025578	PABPC4L	100	80.811	ENSMUSG00000090919	Pabpc4l	100	80.811	Mus_musculus
ENSPCOG00000025578	PABPC4L	100	81.081	MGP_PahariEiJ_G0026409	Pabpc4l	100	81.081	Mus_pahari
ENSPCOG00000025578	PABPC4L	100	80.270	MGP_SPRETEiJ_G0025903	Pabpc4l	100	80.270	Mus_spretus
ENSPCOG00000025578	PABPC4L	99	79.133	ENSMLUG00000008254	PABPC4L	99	79.133	Myotis_lucifugus
ENSPCOG00000025578	PABPC4L	100	87.297	ENSNGAG00000001502	Pabpc4l	100	87.297	Nannospalax_galili
ENSPCOG00000025578	PABPC4L	100	95.135	ENSNLEG00000019300	PABPC4L	100	95.135	Nomascus_leucogenys
ENSPCOG00000025578	PABPC4L	100	88.378	ENSOGAG00000026166	PABPC4L	100	88.378	Otolemur_garnettii
ENSPCOG00000025578	PABPC4L	99	94.427	ENSPPAG00000043745	PABPC4L	93	94.427	Pan_paniscus
ENSPCOG00000025578	PABPC4L	99	89.431	ENSPPRG00000018628	PABPC4L	99	89.431	Panthera_pardus
ENSPCOG00000025578	PABPC4L	99	89.973	ENSPTIG00000010106	PABPC4L	99	89.973	Panthera_tigris_altaica
ENSPCOG00000025578	PABPC4L	99	94.427	ENSPTRG00000045513	-	80	94.427	Pan_troglodytes
ENSPCOG00000025578	PABPC4L	100	82.703	ENSPEMG00000012565	Pabpc4l	100	82.703	Peromyscus_maniculatus_bairdii
ENSPCOG00000025578	PABPC4L	100	81.351	ENSRNOG00000029749	Pabpc4l	100	81.351	Rattus_norvegicus
ENSPCOG00000025578	PABPC4L	100	91.622	ENSRBIG00000030229	PABPC4L	100	91.622	Rhinopithecus_bieti
ENSPCOG00000025578	PABPC4L	100	91.351	ENSRROG00000020367	PABPC4L	100	91.351	Rhinopithecus_roxellana
ENSPCOG00000025578	PABPC4L	100	91.622	ENSSBOG00000016382	PABPC4L	100	91.622	Saimiri_boliviensis_boliviensis
ENSPCOG00000025578	PABPC4L	99	84.011	ENSSSCG00000009067	PABPC4L	99	84.011	Sus_scrofa
ENSPCOG00000025578	PABPC4L	99	89.431	ENSUAMG00000001289	PABPC4L	99	89.431	Ursus_americanus
ENSPCOG00000025578	PABPC4L	99	89.431	ENSUMAG00000014887	PABPC4L	99	89.431	Ursus_maritimus
ENSPCOG00000025578	PABPC4L	91	73.494	ENSVVUG00000011060	-	76	73.494	Vulpes_vulpes