EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000025687 (Gene tree)
Gene ID: 105813000
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 1548057 bases
Position: chrKQ022291.1:4110542-5658598
Accession: 105813000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000026638	Fox-1_C	PF12414.8	8.2e-43	1	1
ENSPCOP00000026623	Fox-1_C	PF12414.8	1.4e-42	1	1
ENSPCOP00000026635	Fox-1_C	PF12414.8	1.4e-40	1	1
ENSPCOP00000026630	Fox-1_C	PF12414.8	2e-40	1	1
ENSPCOP00000026629	Fox-1_C	PF12414.8	2.1e-40	1	1
ENSPCOP00000026621	Fox-1_C	PF12414.8	2.8e-40	1	1
ENSPCOP00000026642	Fox-1_C	PF12414.8	4.6e-21	1	1
ENSPCOP00000026642	RRM_1	PF00076.22	2.9e-18	1	1
ENSPCOP00000026638	RRM_1	PF00076.22	3.3e-18	1	1
ENSPCOP00000026635	RRM_1	PF00076.22	3.5e-18	1	1
ENSPCOP00000026623	RRM_1	PF00076.22	3.9e-18	1	1
ENSPCOP00000026621	RRM_1	PF00076.22	4.5e-18	1	1
ENSPCOP00000026629	RRM_1	PF00076.22	6.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000037385	RBFOX1-202	1278	XM_012647562	ENSPCOP00000026623	425 (aa)	XP_012503016	A0A2K6GK61
ENSPCOT00000037397	RBFOX1-205	1257	XM_012647563	ENSPCOP00000026635	418 (aa)	XP_012503017	A0A2K6GK54
ENSPCOT00000037400	RBFOX1-206	1128	XM_012647564	ENSPCOP00000026638	375 (aa)	XP_012503018	A0A2K6GK75
ENSPCOT00000037392	RBFOX1-204	1143	XM_012647567	ENSPCOP00000026630	380 (aa)	XP_012503021	A0A2K6GK49
ENSPCOT00000037383	RBFOX1-201	1401	-	ENSPCOP00000026621	466 (aa)	-	A0A2K6GK48
ENSPCOT00000037391	RBFOX1-203	1176	-	ENSPCOP00000026629	391 (aa)	-	A0A2K6GK96
ENSPCOT00000037404	RBFOX1-207	1080	-	ENSPCOP00000026642	359 (aa)	-	A0A2K6GKA6

Gene Model

Click here to download ENSPCOG00000025687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000025687's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000025687	RBFOX1	83	66.482	ENSPCOG00000012689	RBFOX3	100	66.111
ENSPCOG00000025687	RBFOX1	99	58.072	ENSPCOG00000016273	RBFOX2	95	62.192

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000025687	RBFOX1	100	99.043	ENSG00000078328	RBFOX1	100	99.240	Homo_sapiens
ENSPCOG00000025687	RBFOX1	99	80.102	ENSAPOG00000003197	rbfox1	98	81.365	Acanthochromis_polyacanthus
ENSPCOG00000025687	RBFOX1	61	96.522	ENSAMEG00000008605	RBFOX1	100	95.200	Ailuropoda_melanoleuca
ENSPCOG00000025687	RBFOX1	64	71.375	ENSACIG00000005478	rbfox1	68	71.375	Amphilophus_citrinellus
ENSPCOG00000025687	RBFOX1	70	78.214	ENSAOCG00000008283	rbfox1	96	77.857	Amphiprion_ocellaris
ENSPCOG00000025687	RBFOX1	93	71.390	ENSAPEG00000010636	rbfox1	100	71.274	Amphiprion_percula
ENSPCOG00000025687	RBFOX1	73	75.170	ENSATEG00000007513	rbfox1	97	75.704	Anabas_testudineus
ENSPCOG00000025687	RBFOX1	94	92.092	ENSAPLG00000013263	RBFOX1	98	92.092	Anas_platyrhynchos
ENSPCOG00000025687	RBFOX1	97	84.949	ENSACAG00000004013	RBFOX1	98	86.005	Anolis_carolinensis
ENSPCOG00000025687	RBFOX1	100	99.233	ENSANAG00000029527	RBFOX1	100	99.233	Aotus_nancymaae
ENSPCOG00000025687	RBFOX1	60	88.889	ENSAMXG00000002431	rbfox1	64	89.498	Astyanax_mexicanus
ENSPCOG00000025687	RBFOX1	93	98.462	ENSBTAG00000007210	RBFOX1	98	98.462	Bos_taurus
ENSPCOG00000025687	RBFOX1	100	98.977	ENSCJAG00000017351	RBFOX1	100	98.977	Callithrix_jacchus
ENSPCOG00000025687	RBFOX1	100	98.325	ENSCAFG00000019082	RBFOX1	100	98.325	Canis_familiaris
ENSPCOG00000025687	RBFOX1	97	88.184	ENSCAFG00020024881	RBFOX1	83	98.311	Canis_lupus_dingo
ENSPCOG00000025687	RBFOX1	93	98.462	ENSCHIG00000023549	RBFOX1	98	98.462	Capra_hircus
ENSPCOG00000025687	RBFOX1	96	99.169	ENSTSYG00000005334	RBFOX1	100	99.229	Carlito_syrichta
ENSPCOG00000025687	RBFOX1	100	97.368	ENSCAPG00000017669	RBFOX1	100	97.368	Cavia_aperea
ENSPCOG00000025687	RBFOX1	100	97.368	ENSCPOG00000011314	RBFOX1	100	97.368	Cavia_porcellus
ENSPCOG00000025687	RBFOX1	100	99.043	ENSCCAG00000023031	RBFOX1	100	99.766	Cebus_capucinus
ENSPCOG00000025687	RBFOX1	100	99.043	ENSCATG00000033816	RBFOX1	100	99.043	Cercocebus_atys
ENSPCOG00000025687	RBFOX1	100	97.847	ENSCLAG00000012761	RBFOX1	100	97.847	Chinchilla_lanigera
ENSPCOG00000025687	RBFOX1	99	92.000	ENSCSAG00000008739	RBFOX1	98	98.378	Chlorocebus_sabaeus
ENSPCOG00000025687	RBFOX1	100	76.794	ENSCHOG00000012843	RBFOX1	100	76.794	Choloepus_hoffmanni
ENSPCOG00000025687	RBFOX1	99	93.029	ENSCPBG00000026626	RBFOX1	98	94.103	Chrysemys_picta_bellii
ENSPCOG00000025687	RBFOX1	100	99.043	ENSCANG00000033125	RBFOX1	100	99.043	Colobus_angolensis_palliatus
ENSPCOG00000025687	RBFOX1	100	97.129	ENSCGRG00001013729	Rbfox1	100	97.129	Cricetulus_griseus_chok1gshd
ENSPCOG00000025687	RBFOX1	100	97.129	ENSCGRG00000003272	Rbfox1	100	97.129	Cricetulus_griseus_crigri
ENSPCOG00000025687	RBFOX1	93	76.216	ENSCSEG00000008840	rbfox1	100	76.216	Cynoglossus_semilaevis
ENSPCOG00000025687	RBFOX1	97	88.430	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSPCOG00000025687	RBFOX1	94	96.675	ENSDNOG00000043612	RBFOX1	94	96.675	Dasypus_novemcinctus
ENSPCOG00000025687	RBFOX1	93	93.639	ENSDORG00000010024	Rbfox1	100	93.059	Dipodomys_ordii
ENSPCOG00000025687	RBFOX1	100	78.708	ENSETEG00000003771	RBFOX1	100	78.708	Echinops_telfairi
ENSPCOG00000025687	RBFOX1	97	98.765	ENSEASG00005011599	RBFOX1	98	99.231	Equus_asinus_asinus
ENSPCOG00000025687	RBFOX1	97	98.519	ENSECAG00000012667	RBFOX1	98	98.519	Equus_caballus
ENSPCOG00000025687	RBFOX1	100	54.111	ENSELUG00000013096	rbfox1	100	53.316	Esox_lucius
ENSPCOG00000025687	RBFOX1	100	98.210	ENSFCAG00000025322	RBFOX1	100	98.210	Felis_catus
ENSPCOG00000025687	RBFOX1	84	87.812	ENSFALG00000004027	RBFOX1	100	92.192	Ficedula_albicollis
ENSPCOG00000025687	RBFOX1	100	97.847	ENSFDAG00000007388	RBFOX1	100	97.847	Fukomys_damarensis
ENSPCOG00000025687	RBFOX1	100	92.823	ENSGALG00000034325	RBFOX1	100	92.823	Gallus_gallus
ENSPCOG00000025687	RBFOX1	100	92.105	ENSGAGG00000023681	RBFOX1	100	92.328	Gopherus_agassizii
ENSPCOG00000025687	RBFOX1	100	99.043	ENSGGOG00000016871	-	100	99.043	Gorilla_gorilla
ENSPCOG00000025687	RBFOX1	100	97.608	ENSHGLG00000016944	RBFOX1	100	97.608	Heterocephalus_glaber_female
ENSPCOG00000025687	RBFOX1	100	97.608	ENSHGLG00100003272	RBFOX1	100	97.608	Heterocephalus_glaber_male
ENSPCOG00000025687	RBFOX1	83	76.562	ENSHCOG00000016419	rbfox1	91	76.562	Hippocampus_comes
ENSPCOG00000025687	RBFOX1	93	90.857	ENSIPUG00000015215	rbfox1	100	90.857	Ictalurus_punctatus
ENSPCOG00000025687	RBFOX1	100	96.890	ENSSTOG00000000322	RBFOX1	100	96.890	Ictidomys_tridecemlineatus
ENSPCOG00000025687	RBFOX1	100	95.215	ENSJJAG00000002575	Rbfox1	100	95.215	Jaculus_jaculus
ENSPCOG00000025687	RBFOX1	93	79.076	ENSLBEG00000014659	rbfox1	97	79.076	Labrus_bergylta
ENSPCOG00000025687	RBFOX1	98	85.139	ENSLOCG00000006675	rbfox1	99	85.533	Lepisosteus_oculatus
ENSPCOG00000025687	RBFOX1	74	99.351	ENSLAFG00000011480	RBFOX1	100	99.351	Loxodonta_africana
ENSPCOG00000025687	RBFOX1	100	98.804	ENSMFAG00000036447	RBFOX1	100	98.804	Macaca_fascicularis
ENSPCOG00000025687	RBFOX1	100	98.804	ENSMMUG00000003458	RBFOX1	100	98.804	Macaca_mulatta
ENSPCOG00000025687	RBFOX1	100	98.804	ENSMNEG00000032034	RBFOX1	100	98.804	Macaca_nemestrina
ENSPCOG00000025687	RBFOX1	100	99.043	ENSMLEG00000015382	RBFOX1	100	99.099	Mandrillus_leucophaeus
ENSPCOG00000025687	RBFOX1	93	80.548	ENSMAMG00000003142	rbfox1	100	81.096	Mastacembelus_armatus
ENSPCOG00000025687	RBFOX1	77	88.129	ENSMGAG00000008606	RBFOX1	96	87.857	Meleagris_gallopavo
ENSPCOG00000025687	RBFOX1	95	53.763	ENSMAUG00000020570	Rbfox1	96	55.181	Mesocricetus_auratus
ENSPCOG00000025687	RBFOX1	100	99.733	ENSMICG00000034286	RBFOX1	100	99.733	Microcebus_murinus
ENSPCOG00000025687	RBFOX1	100	97.129	ENSMOCG00000020932	Rbfox1	100	97.129	Microtus_ochrogaster
ENSPCOG00000025687	RBFOX1	84	77.044	ENSMMOG00000009716	rbfox1	86	77.885	Mola_mola
ENSPCOG00000025687	RBFOX1	94	92.373	ENSMODG00000005826	RBFOX1	100	97.175	Monodelphis_domestica
ENSPCOG00000025687	RBFOX1	99	80.570	ENSMALG00000003337	rbfox1	98	81.333	Monopterus_albus
ENSPCOG00000025687	RBFOX1	100	97.368	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.368	Mus_caroli
ENSPCOG00000025687	RBFOX1	100	97.129	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSPCOG00000025687	RBFOX1	100	97.368	MGP_PahariEiJ_G0016135	Rbfox1	100	97.368	Mus_pahari
ENSPCOG00000025687	RBFOX1	100	96.890	MGP_SPRETEiJ_G0021321	Rbfox1	100	96.890	Mus_spretus
ENSPCOG00000025687	RBFOX1	96	93.388	ENSMPUG00000014822	RBFOX1	93	98.093	Mustela_putorius_furo
ENSPCOG00000025687	RBFOX1	74	97.078	ENSMLUG00000015896	RBFOX1	100	97.078	Myotis_lucifugus
ENSPCOG00000025687	RBFOX1	100	97.608	ENSNGAG00000023276	Rbfox1	100	97.608	Nannospalax_galili
ENSPCOG00000025687	RBFOX1	100	61.429	ENSNBRG00000011084	rbfox1	98	61.429	Neolamprologus_brichardi
ENSPCOG00000025687	RBFOX1	100	98.804	ENSNLEG00000010017	-	100	98.804	Nomascus_leucogenys
ENSPCOG00000025687	RBFOX1	100	80.144	ENSMEUG00000012525	RBFOX1	100	80.144	Notamacropus_eugenii
ENSPCOG00000025687	RBFOX1	88	96.522	ENSOPRG00000006199	-	100	79.904	Ochotona_princeps
ENSPCOG00000025687	RBFOX1	100	97.129	ENSODEG00000013166	RBFOX1	100	97.129	Octodon_degus
ENSPCOG00000025687	RBFOX1	99	88.740	ENSOANG00000002379	RBFOX1	98	95.135	Ornithorhynchus_anatinus
ENSPCOG00000025687	RBFOX1	60	96.262	ENSOCUG00000001205	-	100	94.222	Oryctolagus_cuniculus
ENSPCOG00000025687	RBFOX1	94	96.931	ENSOGAG00000025535	RBFOX1	98	96.931	Otolemur_garnettii
ENSPCOG00000025687	RBFOX1	67	85.892	ENSOARG00000005135	RBFOX1	99	92.641	Ovis_aries
ENSPCOG00000025687	RBFOX1	100	98.977	ENSPPAG00000036238	-	100	99.446	Pan_paniscus
ENSPCOG00000025687	RBFOX1	100	98.210	ENSPPRG00000006546	RBFOX1	100	98.210	Panthera_pardus
ENSPCOG00000025687	RBFOX1	96	84.824	ENSPTIG00000021154	RBFOX1	99	84.469	Panthera_tigris_altaica
ENSPCOG00000025687	RBFOX1	100	99.043	ENSPTRG00000007744	RBFOX1	100	99.043	Pan_troglodytes
ENSPCOG00000025687	RBFOX1	100	99.043	ENSPANG00000026500	RBFOX1	100	99.043	Papio_anubis
ENSPCOG00000025687	RBFOX1	74	89.209	ENSPKIG00000019353	rbfox1	86	91.698	Paramormyrops_kingsleyae
ENSPCOG00000025687	RBFOX1	97	88.493	ENSPKIG00000009667	-	95	90.029	Paramormyrops_kingsleyae
ENSPCOG00000025687	RBFOX1	93	92.308	ENSPSIG00000006523	RBFOX1	97	92.308	Pelodiscus_sinensis
ENSPCOG00000025687	RBFOX1	100	97.368	ENSPEMG00000017607	Rbfox1	100	97.368	Peromyscus_maniculatus_bairdii
ENSPCOG00000025687	RBFOX1	70	94.253	ENSPCIG00000026887	RBFOX1	100	91.468	Phascolarctos_cinereus
ENSPCOG00000025687	RBFOX1	96	94.215	ENSPPYG00000007079	-	93	98.910	Pongo_abelii
ENSPCOG00000025687	RBFOX1	90	89.418	ENSPCAG00000002630	RBFOX1	100	89.418	Procavia_capensis
ENSPCOG00000025687	RBFOX1	100	94.019	ENSPVAG00000013467	RBFOX1	100	94.019	Pteropus_vampyrus
ENSPCOG00000025687	RBFOX1	93	87.838	ENSPNAG00000023109	rbfox1	100	87.838	Pygocentrus_nattereri
ENSPCOG00000025687	RBFOX1	100	94.976	ENSRNOG00000002827	Rbfox1	100	94.976	Rattus_norvegicus
ENSPCOG00000025687	RBFOX1	96	99.446	ENSRBIG00000044478	RBFOX1	100	99.517	Rhinopithecus_bieti
ENSPCOG00000025687	RBFOX1	100	99.043	ENSRROG00000044411	RBFOX1	100	99.043	Rhinopithecus_roxellana
ENSPCOG00000025687	RBFOX1	100	98.977	ENSSBOG00000033726	RBFOX1	100	98.977	Saimiri_boliviensis_boliviensis
ENSPCOG00000025687	RBFOX1	97	89.487	ENSSHAG00000009257	RBFOX1	98	90.793	Sarcophilus_harrisii
ENSPCOG00000025687	RBFOX1	97	76.796	ENSSFOG00015023675	rbfox1	97	86.667	Scleropages_formosus
ENSPCOG00000025687	RBFOX1	89	74.487	ENSSFOG00015009955	-	87	74.487	Scleropages_formosus
ENSPCOG00000025687	RBFOX1	99	81.330	ENSSMAG00000015505	rbfox1	95	81.074	Scophthalmus_maximus
ENSPCOG00000025687	RBFOX1	97	79.620	ENSSDUG00000016413	rbfox1	99	79.726	Seriola_dumerili
ENSPCOG00000025687	RBFOX1	84	77.429	ENSSLDG00000009353	rbfox1	95	78.146	Seriola_lalandi_dorsalis
ENSPCOG00000025687	RBFOX1	83	89.137	ENSSPUG00000009732	RBFOX1	87	89.137	Sphenodon_punctatus
ENSPCOG00000025687	RBFOX1	100	78.042	ENSSPAG00000009723	rbfox1	100	81.003	Stegastes_partitus
ENSPCOG00000025687	RBFOX1	97	98.025	ENSSSCG00000007917	RBFOX1	100	98.870	Sus_scrofa
ENSPCOG00000025687	RBFOX1	93	92.308	ENSTGUG00000004562	RBFOX1	100	92.308	Taeniopygia_guttata
ENSPCOG00000025687	RBFOX1	97	80.739	ENSTRUG00000020940	rbfox1	99	81.003	Takifugu_rubripes
ENSPCOG00000025687	RBFOX1	64	62.718	ENSTNIG00000002567	rbfox1	100	64.460	Tetraodon_nigroviridis
ENSPCOG00000025687	RBFOX1	81	89.655	ENSTBEG00000009169	-	81	89.655	Tupaia_belangeri
ENSPCOG00000025687	RBFOX1	100	98.086	ENSTTRG00000005700	RBFOX1	100	98.086	Tursiops_truncatus
ENSPCOG00000025687	RBFOX1	97	98.271	ENSUAMG00000024633	RBFOX1	97	94.010	Ursus_americanus
ENSPCOG00000025687	RBFOX1	97	88.184	ENSUMAG00000003579	RBFOX1	97	84.896	Ursus_maritimus
ENSPCOG00000025687	RBFOX1	81	99.351	ENSVPAG00000001284	RBFOX1	81	99.351	Vicugna_pacos
ENSPCOG00000025687	RBFOX1	98	97.548	ENSVVUG00000017311	RBFOX1	98	97.838	Vulpes_vulpes