EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000025882 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 4 pseudogene
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 5892 bases
Position: chrKQ021659.1:4729412-4735303
Accession: 105810490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000026923	PABP	PF00658.18	2e-29	1	1
ENSPCOP00000026924	PABP	PF00658.18	2.8e-29	1	1
ENSPCOP00000026923	RRM_1	PF00076.22	2.6e-53	1	3
ENSPCOP00000026923	RRM_1	PF00076.22	2.6e-53	2	3
ENSPCOP00000026923	RRM_1	PF00076.22	2.6e-53	3	3
ENSPCOP00000026924	RRM_1	PF00076.22	3.5e-53	1	3
ENSPCOP00000026924	RRM_1	PF00076.22	3.5e-53	2	3
ENSPCOP00000026924	RRM_1	PF00076.22	3.5e-53	3	3
ENSPCOP00000026925	RRM_1	PF00076.22	5.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000037712	-	1626	-	ENSPCOP00000026924	541 (aa)	-	A0A2K6GL38
ENSPCOT00000037713	-	825	-	ENSPCOP00000026925	274 (aa)	-	A0A2K6GKZ7
ENSPCOT00000037711	-	1533	-	ENSPCOP00000026923	510 (aa)	-	A0A2K6GL12

Gene Model

Click here to download ENSPCOG00000025882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000025882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000025882	-	99	59.474	ENSPCOG00000013197	PABPC3	99	60.177
ENSPCOG00000025882	-	99	70.166	ENSPCOG00000020234	PABPC1	91	83.505
ENSPCOG00000025882	-	62	53.371	ENSPCOG00000000676	PABPC5	96	58.528
ENSPCOG00000025882	-	65	56.793	ENSPCOG00000025578	PABPC4L	97	63.545
ENSPCOG00000025882	-	96	58.140	ENSPCOG00000020630	PABPC1L	99	58.140
ENSPCOG00000025882	-	63	45.685	ENSPCOG00000026349	-	98	51.852
ENSPCOG00000025882	-	57	30.653	ENSPCOG00000003300	ELAVL1	79	32.099
ENSPCOG00000025882	-	95	94.059	ENSPCOG00000023725	-	99	82.712

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000025882	-	95	94.059	ENSG00000090621	PABPC4	99	95.522	Homo_sapiens
ENSPCOG00000025882	-	98	69.213	ENSAPOG00000001161	pabpc4	99	69.213	Acanthochromis_polyacanthus
ENSPCOG00000025882	-	99	48.264	ENSAMEG00000015083	-	99	43.456	Ailuropoda_melanoleuca
ENSPCOG00000025882	-	95	94.059	ENSAMEG00000011535	-	99	81.664	Ailuropoda_melanoleuca
ENSPCOG00000025882	-	96	79.091	ENSACIG00000023343	pabpc4	99	69.444	Amphilophus_citrinellus
ENSPCOG00000025882	-	95	84.375	ENSAOCG00000021529	pabpc4	99	69.213	Amphiprion_ocellaris
ENSPCOG00000025882	-	95	84.375	ENSAPEG00000019196	pabpc4	99	69.213	Amphiprion_percula
ENSPCOG00000025882	-	95	84.375	ENSATEG00000007402	pabpc4	99	68.591	Anabas_testudineus
ENSPCOG00000025882	-	94	86.000	ENSAPLG00000009729	-	100	73.239	Anas_platyrhynchos
ENSPCOG00000025882	-	99	72.855	ENSACAG00000002544	PABPC4	100	77.686	Anolis_carolinensis
ENSPCOG00000025882	-	95	94.059	ENSANAG00000025079	PABPC4	99	82.003	Aotus_nancymaae
ENSPCOG00000025882	-	95	81.905	ENSACLG00000019558	pabpc4	99	69.444	Astatotilapia_calliptera
ENSPCOG00000025882	-	96	82.178	ENSAMXG00000018779	pabpc4	83	82.178	Astyanax_mexicanus
ENSPCOG00000025882	-	53	57.353	ENSBTAG00000048536	-	92	83.824	Bos_taurus
ENSPCOG00000025882	-	95	94.059	ENSBTAG00000017125	PABPC4	99	80.000	Bos_taurus
ENSPCOG00000025882	-	95	94.059	ENSCJAG00000002512	-	99	81.834	Callithrix_jacchus
ENSPCOG00000025882	-	89	78.125	ENSCJAG00000045953	-	99	77.692	Callithrix_jacchus
ENSPCOG00000025882	-	95	94.059	ENSCAFG00000003081	PABPC4	99	78.735	Canis_familiaris
ENSPCOG00000025882	-	95	94.059	ENSCAFG00020004161	PABPC4	99	81.664	Canis_lupus_dingo
ENSPCOG00000025882	-	94	71.287	ENSCHIG00000023385	-	82	71.287	Capra_hircus
ENSPCOG00000025882	-	95	94.059	ENSCHIG00000019398	-	99	81.494	Capra_hircus
ENSPCOG00000025882	-	95	94.059	ENSTSYG00000006532	PABPC4	99	82.003	Carlito_syrichta
ENSPCOG00000025882	-	95	93.069	ENSCAPG00000015984	PABPC4	99	81.664	Cavia_aperea
ENSPCOG00000025882	-	95	94.059	ENSCPOG00000009552	PABPC4	99	81.664	Cavia_porcellus
ENSPCOG00000025882	-	95	94.059	ENSCCAG00000037306	PABPC4	99	82.483	Cebus_capucinus
ENSPCOG00000025882	-	95	94.059	ENSCATG00000042164	PABPC4	99	82.173	Cercocebus_atys
ENSPCOG00000025882	-	95	93.069	ENSCLAG00000011899	PABPC4	99	81.664	Chinchilla_lanigera
ENSPCOG00000025882	-	95	94.059	ENSCSAG00000001135	PABPC4	99	82.173	Chlorocebus_sabaeus
ENSPCOG00000025882	-	88	89.109	ENSCHOG00000005327	PABPC4	79	89.109	Choloepus_hoffmanni
ENSPCOG00000025882	-	99	71.429	ENSCPBG00000001038	PABPC4	99	72.154	Chrysemys_picta_bellii
ENSPCOG00000025882	-	94	94.059	ENSCANG00000034177	PABPC4	99	82.513	Colobus_angolensis_palliatus
ENSPCOG00000025882	-	94	93.478	ENSCGRG00001018166	Pabpc4	99	79.899	Cricetulus_griseus_chok1gshd
ENSPCOG00000025882	-	92	93.478	ENSCGRG00000009777	Pabpc4	99	77.703	Cricetulus_griseus_crigri
ENSPCOG00000025882	-	99	69.444	ENSCSEG00000000130	pabpc4	99	69.444	Cynoglossus_semilaevis
ENSPCOG00000025882	-	100	68.190	ENSCVAG00000019246	pabpc4	99	68.717	Cyprinodon_variegatus
ENSPCOG00000025882	-	95	85.106	ENSDARG00000059259	pabpc4	84	86.111	Danio_rerio
ENSPCOG00000025882	-	87	94.059	ENSDNOG00000018444	-	100	83.471	Dasypus_novemcinctus
ENSPCOG00000025882	-	95	94.059	ENSDORG00000011581	Pabpc4	99	79.626	Dipodomys_ordii
ENSPCOG00000025882	-	95	82.961	ENSETEG00000018453	-	75	84.584	Echinops_telfairi
ENSPCOG00000025882	-	83	70.175	ENSETEG00000009172	-	99	54.579	Echinops_telfairi
ENSPCOG00000025882	-	97	62.749	ENSEBUG00000013782	pabpc4	99	62.544	Eptatretus_burgeri
ENSPCOG00000025882	-	97	63.084	ENSEBUG00000000992	pabpc4	99	63.084	Eptatretus_burgeri
ENSPCOG00000025882	-	95	94.059	ENSEASG00005014119	PABPC4	99	82.173	Equus_asinus_asinus
ENSPCOG00000025882	-	95	94.059	ENSECAG00000009396	PABPC4	99	82.173	Equus_caballus
ENSPCOG00000025882	-	98	92.079	ENSEEUG00000002962	PABPC4	99	79.252	Erinaceus_europaeus
ENSPCOG00000025882	-	97	69.159	ENSELUG00000003195	pabpc4	98	68.134	Esox_lucius
ENSPCOG00000025882	-	95	94.059	ENSFCAG00000015254	-	99	81.834	Felis_catus
ENSPCOG00000025882	-	95	86.000	ENSFALG00000000543	PABPC4	99	71.503	Ficedula_albicollis
ENSPCOG00000025882	-	83	76.496	ENSFDAG00000010581	-	99	58.541	Fukomys_damarensis
ENSPCOG00000025882	-	95	94.059	ENSFDAG00000020016	-	99	82.003	Fukomys_damarensis
ENSPCOG00000025882	-	99	69.444	ENSFHEG00000007548	pabpc4	99	69.444	Fundulus_heteroclitus
ENSPCOG00000025882	-	95	81.633	ENSGMOG00000019025	pabpc4	98	67.018	Gadus_morhua
ENSPCOG00000025882	-	95	86.000	ENSGALG00000003800	PABPC4	99	72.982	Gallus_gallus
ENSPCOG00000025882	-	95	82.692	ENSGAFG00000018195	pabpc4	90	89.744	Gambusia_affinis
ENSPCOG00000025882	-	95	81.905	ENSGACG00000007179	pabpc4	99	69.159	Gasterosteus_aculeatus
ENSPCOG00000025882	-	99	73.380	ENSGAGG00000001888	PABPC4	99	72.504	Gopherus_agassizii
ENSPCOG00000025882	-	95	94.059	ENSGGOG00000004002	PABPC4	99	82.173	Gorilla_gorilla
ENSPCOG00000025882	-	95	82.857	ENSHBUG00000020206	pabpc4	99	69.444	Haplochromis_burtoni
ENSPCOG00000025882	-	95	94.059	ENSHGLG00000011162	PABPC4	99	82.173	Heterocephalus_glaber_female
ENSPCOG00000025882	-	95	94.059	ENSHGLG00100001580	PABPC4	99	79.966	Heterocephalus_glaber_male
ENSPCOG00000025882	-	95	80.000	ENSHCOG00000012694	pabpc4	87	80.000	Hippocampus_comes
ENSPCOG00000025882	-	92	85.227	ENSIPUG00000016620	pabpc4	99	67.539	Ictalurus_punctatus
ENSPCOG00000025882	-	95	94.059	ENSSTOG00000010416	PABPC4	99	79.796	Ictidomys_tridecemlineatus
ENSPCOG00000025882	-	95	93.069	ENSJJAG00000007781	Pabpc4	84	93.069	Jaculus_jaculus
ENSPCOG00000025882	-	99	69.444	ENSKMAG00000013597	pabpc4	98	68.198	Kryptolebias_marmoratus
ENSPCOG00000025882	-	95	81.132	ENSLBEG00000013654	pabpc4	99	69.213	Labrus_bergylta
ENSPCOG00000025882	-	99	86.000	ENSLACG00000011907	PABPC4	99	69.739	Latimeria_chalumnae
ENSPCOG00000025882	-	98	71.262	ENSLOCG00000001877	pabpc4	99	71.262	Lepisosteus_oculatus
ENSPCOG00000025882	-	95	94.059	ENSLAFG00000000151	PABPC4	99	81.834	Loxodonta_africana
ENSPCOG00000025882	-	95	94.059	ENSMFAG00000041481	PABPC4	99	82.173	Macaca_fascicularis
ENSPCOG00000025882	-	95	94.059	ENSMMUG00000007497	PABPC4	99	82.173	Macaca_mulatta
ENSPCOG00000025882	-	95	94.059	ENSMNEG00000043054	PABPC4	99	82.003	Macaca_nemestrina
ENSPCOG00000025882	-	95	94.059	ENSMLEG00000040716	PABPC4	99	82.173	Mandrillus_leucophaeus
ENSPCOG00000025882	-	90	87.671	ENSMAMG00000010025	pabpc4	84	87.671	Mastacembelus_armatus
ENSPCOG00000025882	-	96	79.091	ENSMZEG00005006141	pabpc4	99	69.213	Maylandia_zebra
ENSPCOG00000025882	-	88	86.000	ENSMGAG00000005408	PABPC4	100	77.838	Meleagris_gallopavo
ENSPCOG00000025882	-	68	88.119	ENSMAUG00000019763	-	99	54.104	Mesocricetus_auratus
ENSPCOG00000025882	-	53	64.000	ENSMAUG00000004089	-	84	64.000	Mesocricetus_auratus
ENSPCOG00000025882	-	74	84.135	ENSMAUG00000001295	-	97	84.135	Mesocricetus_auratus
ENSPCOG00000025882	-	84	92.735	ENSMICG00000036729	-	99	74.067	Microcebus_murinus
ENSPCOG00000025882	-	83	92.704	ENSMICG00000016633	-	97	92.340	Microcebus_murinus
ENSPCOG00000025882	-	94	93.617	ENSMOCG00000006763	Pabpc4	99	80.101	Microtus_ochrogaster
ENSPCOG00000025882	-	100	65.789	ENSMMOG00000002363	pabpc4	99	66.901	Mola_mola
ENSPCOG00000025882	-	59	60.252	ENSMODG00000018051	-	81	60.252	Monodelphis_domestica
ENSPCOG00000025882	-	98	72.444	ENSMODG00000017657	-	99	71.986	Monodelphis_domestica
ENSPCOG00000025882	-	95	81.818	ENSMALG00000011017	pabpc4	99	67.714	Monopterus_albus
ENSPCOG00000025882	-	95	93.069	MGP_CAROLIEiJ_G0026435	-	99	86.567	Mus_caroli
ENSPCOG00000025882	-	91	89.109	MGP_CAROLIEiJ_G0024864	-	100	72.178	Mus_caroli
ENSPCOG00000025882	-	95	93.069	ENSMUSG00000011257	Pabpc4	97	85.075	Mus_musculus
ENSPCOG00000025882	-	94	91.089	MGP_PahariEiJ_G0028765	Pabpc4	99	86.567	Mus_pahari
ENSPCOG00000025882	-	94	93.069	MGP_SPRETEiJ_G0027415	Pabpc4	99	85.075	Mus_spretus
ENSPCOG00000025882	-	96	45.144	ENSMPUG00000006836	-	90	44.689	Mustela_putorius_furo
ENSPCOG00000025882	-	95	94.059	ENSMPUG00000014414	-	99	81.834	Mustela_putorius_furo
ENSPCOG00000025882	-	95	93.069	ENSMLUG00000012068	PABPC4	99	76.937	Myotis_lucifugus
ENSPCOG00000025882	-	95	94.059	ENSNGAG00000018292	Pabpc4	99	79.796	Nannospalax_galili
ENSPCOG00000025882	-	65	53.365	ENSNBRG00000009708	pabpc4	98	60.959	Neolamprologus_brichardi
ENSPCOG00000025882	-	70	77.835	ENSNBRG00000010047	-	84	77.041	Neolamprologus_brichardi
ENSPCOG00000025882	-	95	94.059	ENSNLEG00000011928	PABPC4	99	79.966	Nomascus_leucogenys
ENSPCOG00000025882	-	88	90.323	ENSOPRG00000011984	PABPC4	85	90.323	Ochotona_princeps
ENSPCOG00000025882	-	95	92.079	ENSODEG00000006592	-	99	81.154	Octodon_degus
ENSPCOG00000025882	-	50	48.673	ENSODEG00000013457	-	99	48.673	Octodon_degus
ENSPCOG00000025882	-	95	82.911	ENSODEG00000017434	-	100	81.988	Octodon_degus
ENSPCOG00000025882	-	95	81.905	ENSONIG00000008176	pabpc4	99	69.676	Oreochromis_niloticus
ENSPCOG00000025882	-	99	71.259	ENSOANG00000010001	PABPC4	99	72.711	Ornithorhynchus_anatinus
ENSPCOG00000025882	-	90	91.781	ENSOCUG00000000562	PABPC4	88	80.927	Oryctolagus_cuniculus
ENSPCOG00000025882	-	95	81.250	ENSORLG00000017479	pabpc4	98	71.146	Oryzias_latipes
ENSPCOG00000025882	-	95	82.292	ENSORLG00020018644	pabpc4	98	71.146	Oryzias_latipes_hni
ENSPCOG00000025882	-	95	82.292	ENSORLG00015015042	pabpc4	98	71.146	Oryzias_latipes_hsok
ENSPCOG00000025882	-	95	82.292	ENSOMEG00000014410	pabpc4	99	69.213	Oryzias_melastigma
ENSPCOG00000025882	-	95	94.059	ENSOGAG00000004067	PABPC4	99	79.899	Otolemur_garnettii
ENSPCOG00000025882	-	95	94.059	ENSOARG00000020060	PABPC4	99	81.494	Ovis_aries
ENSPCOG00000025882	-	95	94.059	ENSPPAG00000043625	PABPC4	99	82.173	Pan_paniscus
ENSPCOG00000025882	-	95	94.059	ENSPPRG00000024727	PABPC4	99	81.834	Panthera_pardus
ENSPCOG00000025882	-	95	94.059	ENSPTIG00000005829	PABPC4	99	81.834	Panthera_tigris_altaica
ENSPCOG00000025882	-	95	94.059	ENSPTRG00000000573	PABPC4	99	82.173	Pan_troglodytes
ENSPCOG00000025882	-	95	94.059	ENSPANG00000009484	PABPC4	99	82.003	Papio_anubis
ENSPCOG00000025882	-	95	81.000	ENSPKIG00000025356	pabpc4	98	69.459	Paramormyrops_kingsleyae
ENSPCOG00000025882	-	99	71.429	ENSPSIG00000016892	PABPC4	99	73.239	Pelodiscus_sinensis
ENSPCOG00000025882	-	100	66.138	ENSPMGG00000009073	pabpc4	98	65.278	Periophthalmus_magnuspinnatus
ENSPCOG00000025882	-	98	85.455	ENSPEMG00000024193	-	99	74.703	Peromyscus_maniculatus_bairdii
ENSPCOG00000025882	-	97	85.455	ENSPEMG00000023569	-	99	80.645	Peromyscus_maniculatus_bairdii
ENSPCOG00000025882	-	82	71.168	ENSPMAG00000007885	pabpc4	100	71.168	Petromyzon_marinus
ENSPCOG00000025882	-	67	78.378	ENSPMAG00000002836	pabpc4	99	58.546	Petromyzon_marinus
ENSPCOG00000025882	-	95	85.417	ENSPCIG00000020674	PABPC4	99	76.471	Phascolarctos_cinereus
ENSPCOG00000025882	-	95	82.692	ENSPFOG00000002682	pabpc4	99	68.596	Poecilia_formosa
ENSPCOG00000025882	-	95	82.692	ENSPLAG00000010112	pabpc4	99	68.596	Poecilia_latipinna
ENSPCOG00000025882	-	94	86.170	ENSPMEG00000019739	pabpc4	99	68.772	Poecilia_mexicana
ENSPCOG00000025882	-	99	69.444	ENSPREG00000001589	pabpc4	99	68.772	Poecilia_reticulata
ENSPCOG00000025882	-	95	94.059	ENSPPYG00000001506	PABPC4	99	82.173	Pongo_abelii
ENSPCOG00000025882	-	95	94.059	ENSPCAG00000003341	PABPC4	99	76.401	Procavia_capensis
ENSPCOG00000025882	-	88	94.059	ENSPVAG00000002187	PABPC4	99	81.324	Pteropus_vampyrus
ENSPCOG00000025882	-	95	81.905	ENSPNYG00000006134	pabpc4	99	69.444	Pundamilia_nyererei
ENSPCOG00000025882	-	100	69.037	ENSPNAG00000024355	pabpc4	100	69.037	Pygocentrus_nattereri
ENSPCOG00000025882	-	95	93.069	ENSRNOG00000015642	Pabpc4	99	78.438	Rattus_norvegicus
ENSPCOG00000025882	-	95	93.069	ENSRNOG00000028592	AABR07035074.1	83	93.069	Rattus_norvegicus
ENSPCOG00000025882	-	95	94.059	ENSRBIG00000039761	PABPC4	99	82.173	Rhinopithecus_bieti
ENSPCOG00000025882	-	95	94.059	ENSRROG00000033355	PABPC4	99	82.173	Rhinopithecus_roxellana
ENSPCOG00000025882	-	95	94.059	ENSSBOG00000026193	PABPC4	99	82.313	Saimiri_boliviensis_boliviensis
ENSPCOG00000025882	-	98	71.528	ENSSHAG00000018139	PABPC4	99	71.296	Sarcophilus_harrisii
ENSPCOG00000025882	-	93	76.203	ENSSFOG00015023514	pabpc4	99	69.947	Scleropages_formosus
ENSPCOG00000025882	-	95	83.505	ENSSMAG00000009007	pabpc4	84	83.505	Scophthalmus_maximus
ENSPCOG00000025882	-	98	68.981	ENSSDUG00000012683	pabpc4	99	68.981	Seriola_dumerili
ENSPCOG00000025882	-	98	68.981	ENSSLDG00000013025	pabpc4	99	68.981	Seriola_lalandi_dorsalis
ENSPCOG00000025882	-	95	93.069	ENSSARG00000000310	PABPC4	93	81.154	Sorex_araneus
ENSPCOG00000025882	-	95	86.000	ENSSPUG00000003204	PABPC4	99	71.454	Sphenodon_punctatus
ENSPCOG00000025882	-	98	69.213	ENSSPAG00000009252	pabpc4	99	74.667	Stegastes_partitus
ENSPCOG00000025882	-	95	94.059	ENSSSCG00000003660	-	99	81.664	Sus_scrofa
ENSPCOG00000025882	-	100	49.005	ENSSSCG00000036170	-	96	48.644	Sus_scrofa
ENSPCOG00000025882	-	99	70.508	ENSTGUG00000001266	PABPC4	99	70.508	Taeniopygia_guttata
ENSPCOG00000025882	-	95	80.198	ENSTRUG00000005907	pabpc4	98	67.133	Takifugu_rubripes
ENSPCOG00000025882	-	98	69.363	ENSTNIG00000016902	pabpc4	98	69.363	Tetraodon_nigroviridis
ENSPCOG00000025882	-	88	94.059	ENSTBEG00000009035	PABPC4	79	94.059	Tupaia_belangeri
ENSPCOG00000025882	-	83	91.845	ENSTTRG00000014340	PABPC4	99	75.263	Tursiops_truncatus
ENSPCOG00000025882	-	95	94.059	ENSUAMG00000000303	PABPC4	99	81.494	Ursus_americanus
ENSPCOG00000025882	-	95	94.059	ENSUMAG00000019585	PABPC4	98	93.878	Ursus_maritimus
ENSPCOG00000025882	-	73	96.429	ENSVPAG00000010041	PABPC4	53	96.429	Vicugna_pacos
ENSPCOG00000025882	-	95	94.059	ENSVVUG00000005215	PABPC4	99	81.664	Vulpes_vulpes
ENSPCOG00000025882	-	57	86.567	ENSXETG00000027221	-	96	86.567	Xenopus_tropicalis
ENSPCOG00000025882	-	99	67.021	ENSXETG00000010946	pabpc4	99	65.831	Xenopus_tropicalis
ENSPCOG00000025882	-	100	73.810	ENSXCOG00000013190	pabpc4	96	90.756	Xiphophorus_couchianus
ENSPCOG00000025882	-	99	69.213	ENSXMAG00000019007	pabpc4	99	68.596	Xiphophorus_maculatus