EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000026201 (Gene tree)
Gene ID: 105811596
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 11901 bases
Position: chrKQ021925.1:3685101-3697001
Accession: 105811596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000027425	RRM_1	PF00076.22	1.1e-18	1	1
ENSPCOP00000027427	RRM_1	PF00076.22	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000038240	RBM38-201	1978	XM_012645844	ENSPCOP00000027425	240 (aa)	XP_012501298	A0A2K6GMF4
ENSPCOT00000038242	RBM38-202	369	-	ENSPCOP00000027427	122 (aa)	-	A0A2K6GMJ6

Gene Model

Click here to download ENSPCOG00000026201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000026201's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000026201	RBM38	84	52.083	ENSPCOG00000014446	-	66	52.083
ENSPCOG00000026201	RBM38	57	30.000	ENSPCOG00000015159	SLIRP	65	30.000
ENSPCOG00000026201	RBM38	51	41.935	ENSPCOG00000013607	-	79	41.935
ENSPCOG00000026201	RBM38	83	90.099	ENSPCOG00000015077	RBM24	100	68.487
ENSPCOG00000026201	RBM38	70	37.209	ENSPCOG00000017170	-	87	37.209
ENSPCOG00000026201	RBM38	61	40.789	ENSPCOG00000013194	-	65	40.580
ENSPCOG00000026201	RBM38	64	44.118	ENSPCOG00000015986	-	55	44.118
ENSPCOG00000026201	RBM38	89	40.260	ENSPCOG00000019195	-	89	40.260
ENSPCOG00000026201	RBM38	65	42.857	ENSPCOG00000026324	HNRNPA2B1	64	42.857
ENSPCOG00000026201	RBM38	60	42.647	ENSPCOG00000027833	-	51	42.647
ENSPCOG00000026201	RBM38	75	34.524	ENSPCOG00000015793	-	57	34.118
ENSPCOG00000026201	RBM38	77	36.842	ENSPCOG00000017341	MSI1	79	36.842
ENSPCOG00000026201	RBM38	68	41.667	ENSPCOG00000028262	CIRBP	50	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000026201	RBM38	100	98.361	ENSG00000132819	RBM38	100	98.361	Homo_sapiens
ENSPCOG00000026201	RBM38	81	90.099	ENSAPOG00000009939	-	94	68.018	Acanthochromis_polyacanthus
ENSPCOG00000026201	RBM38	84	83.495	ENSAPOG00000003301	rbm38	91	59.565	Acanthochromis_polyacanthus
ENSPCOG00000026201	RBM38	84	83.495	ENSACIG00000000010	rbm38	91	57.511	Amphilophus_citrinellus
ENSPCOG00000026201	RBM38	80	92.929	ENSACIG00000012502	-	100	88.034	Amphilophus_citrinellus
ENSPCOG00000026201	RBM38	84	83.495	ENSAOCG00000013497	-	91	59.565	Amphiprion_ocellaris
ENSPCOG00000026201	RBM38	100	78.226	ENSAOCG00000012559	RBM38	99	63.673	Amphiprion_ocellaris
ENSPCOG00000026201	RBM38	99	75.806	ENSAPEG00000013137	rbm38	99	60.408	Amphiprion_percula
ENSPCOG00000026201	RBM38	81	90.099	ENSAPEG00000023581	-	95	65.272	Amphiprion_percula
ENSPCOG00000026201	RBM38	84	82.692	ENSATEG00000016366	rbm38	97	60.262	Anabas_testudineus
ENSPCOG00000026201	RBM38	77	93.617	ENSATEG00000016710	-	92	66.094	Anabas_testudineus
ENSPCOG00000026201	RBM38	81	91.919	ENSACAG00000016238	RBM38	97	75.847	Anolis_carolinensis
ENSPCOG00000026201	RBM38	100	99.180	ENSANAG00000031959	RBM38	100	99.180	Aotus_nancymaae
ENSPCOG00000026201	RBM38	77	94.681	ENSACLG00000019514	-	92	66.953	Astatotilapia_calliptera
ENSPCOG00000026201	RBM38	77	86.170	ENSAMXG00000038120	rbm38	88	59.906	Astyanax_mexicanus
ENSPCOG00000026201	RBM38	81	91.089	ENSAMXG00000015601	-	95	67.826	Astyanax_mexicanus
ENSPCOG00000026201	RBM38	100	97.541	ENSBTAG00000008105	RBM38	100	94.167	Bos_taurus
ENSPCOG00000026201	RBM38	73	85.393	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSPCOG00000026201	RBM38	100	99.180	ENSCJAG00000019139	RBM38	100	99.180	Callithrix_jacchus
ENSPCOG00000026201	RBM38	100	98.361	ENSCAFG00020021943	RBM38	100	95.833	Canis_lupus_dingo
ENSPCOG00000026201	RBM38	100	96.721	ENSCHIG00000002609	RBM38	100	93.333	Capra_hircus
ENSPCOG00000026201	RBM38	100	99.180	ENSCPOG00000012781	RBM38	100	96.667	Cavia_porcellus
ENSPCOG00000026201	RBM38	100	99.180	ENSCCAG00000036872	RBM38	100	99.180	Cebus_capucinus
ENSPCOG00000026201	RBM38	100	99.180	ENSCATG00000032133	RBM38	100	99.180	Cercocebus_atys
ENSPCOG00000026201	RBM38	93	99.115	ENSCLAG00000005906	RBM38	100	95.671	Chinchilla_lanigera
ENSPCOG00000026201	RBM38	100	99.180	ENSCSAG00000015503	RBM38	100	95.833	Chlorocebus_sabaeus
ENSPCOG00000026201	RBM38	80	94.898	ENSCPBG00000024059	RBM38	100	82.569	Chrysemys_picta_bellii
ENSPCOG00000026201	RBM38	80	84.536	ENSCSAVG00000001132	-	59	62.658	Ciona_savignyi
ENSPCOG00000026201	RBM38	99	80.165	ENSCANG00000030105	-	89	73.640	Colobus_angolensis_palliatus
ENSPCOG00000026201	RBM38	100	95.082	ENSCGRG00001012928	Rbm38	100	92.500	Cricetulus_griseus_chok1gshd
ENSPCOG00000026201	RBM38	77	93.617	ENSCSEG00000004701	-	93	70.455	Cynoglossus_semilaevis
ENSPCOG00000026201	RBM38	79	82.292	ENSCSEG00000020943	rbm38	60	60.870	Cynoglossus_semilaevis
ENSPCOG00000026201	RBM38	77	95.745	ENSCVAG00000005472	-	92	68.103	Cyprinodon_variegatus
ENSPCOG00000026201	RBM38	75	91.304	ENSCVAG00000015952	rbm38	91	59.227	Cyprinodon_variegatus
ENSPCOG00000026201	RBM38	77	92.553	ENSDARG00000058818	rbm38	92	65.022	Danio_rerio
ENSPCOG00000026201	RBM38	90	88.426	ENSDNOG00000032004	RBM38	100	88.426	Dasypus_novemcinctus
ENSPCOG00000026201	RBM38	89	84.259	ENSEBUG00000015164	rbm38	66	84.259	Eptatretus_burgeri
ENSPCOG00000026201	RBM38	100	97.541	ENSECAG00000007700	RBM38	100	94.583	Equus_caballus
ENSPCOG00000026201	RBM38	100	93.443	ENSEEUG00000013489	RBM38	100	93.361	Erinaceus_europaeus
ENSPCOG00000026201	RBM38	80	88.889	ENSELUG00000000585	-	87	65.174	Esox_lucius
ENSPCOG00000026201	RBM38	81	88.119	ENSELUG00000005849	-	95	66.245	Esox_lucius
ENSPCOG00000026201	RBM38	100	97.541	ENSFCAG00000042916	RBM38	100	97.541	Felis_catus
ENSPCOG00000026201	RBM38	84	92.233	ENSFALG00000010805	RBM38	94	82.967	Ficedula_albicollis
ENSPCOG00000026201	RBM38	77	95.745	ENSFHEG00000006160	-	92	71.759	Fundulus_heteroclitus
ENSPCOG00000026201	RBM38	76	91.398	ENSFHEG00000017748	rbm38	91	57.511	Fundulus_heteroclitus
ENSPCOG00000026201	RBM38	77	93.617	ENSGMOG00000016655	-	96	74.725	Gadus_morhua
ENSPCOG00000026201	RBM38	80	94.898	ENSGALG00000026081	RBM38	100	80.734	Gallus_gallus
ENSPCOG00000026201	RBM38	80	88.000	ENSGACG00000009873	-	100	68.000	Gasterosteus_aculeatus
ENSPCOG00000026201	RBM38	80	84.848	ENSGACG00000015224	rbm38	98	63.208	Gasterosteus_aculeatus
ENSPCOG00000026201	RBM38	80	94.898	ENSGAGG00000001187	RBM38	100	83.028	Gopherus_agassizii
ENSPCOG00000026201	RBM38	94	76.724	ENSHBUG00000012058	rbm38	97	57.895	Haplochromis_burtoni
ENSPCOG00000026201	RBM38	77	94.681	ENSHBUG00000011778	-	92	70.909	Haplochromis_burtoni
ENSPCOG00000026201	RBM38	100	97.541	ENSHGLG00000015077	RBM38	100	92.083	Heterocephalus_glaber_female
ENSPCOG00000026201	RBM38	81	89.109	ENSHCOG00000005622	-	53	73.545	Hippocampus_comes
ENSPCOG00000026201	RBM38	74	85.556	ENSHCOG00000019040	rbm38	82	57.653	Hippocampus_comes
ENSPCOG00000026201	RBM38	81	91.089	ENSIPUG00000019349	-	95	66.379	Ictalurus_punctatus
ENSPCOG00000026201	RBM38	60	95.890	ENSJJAG00000016299	-	90	95.890	Jaculus_jaculus
ENSPCOG00000026201	RBM38	73	86.517	ENSKMAG00000012402	rbm38	98	53.390	Kryptolebias_marmoratus
ENSPCOG00000026201	RBM38	84	83.495	ENSLBEG00000018878	rbm38	91	58.369	Labrus_bergylta
ENSPCOG00000026201	RBM38	77	93.617	ENSLBEG00000016163	RBM38	92	69.406	Labrus_bergylta
ENSPCOG00000026201	RBM38	81	91.000	ENSLOCG00000003456	rbm38	95	71.556	Lepisosteus_oculatus
ENSPCOG00000026201	RBM38	97	99.153	ENSMFAG00000043808	RBM38	97	99.153	Macaca_fascicularis
ENSPCOG00000026201	RBM38	100	99.180	ENSMMUG00000031391	RBM38	100	99.180	Macaca_mulatta
ENSPCOG00000026201	RBM38	100	99.180	ENSMNEG00000034683	RBM38	100	99.180	Macaca_nemestrina
ENSPCOG00000026201	RBM38	76	81.720	ENSMLEG00000043261	-	88	83.486	Mandrillus_leucophaeus
ENSPCOG00000026201	RBM38	84	82.524	ENSMAMG00000024135	rbm38	91	59.227	Mastacembelus_armatus
ENSPCOG00000026201	RBM38	81	90.099	ENSMAMG00000020499	RBM38	95	64.979	Mastacembelus_armatus
ENSPCOG00000026201	RBM38	77	94.681	ENSMZEG00005000849	-	92	70.909	Maylandia_zebra
ENSPCOG00000026201	RBM38	84	81.731	ENSMZEG00005026036	rbm38	95	56.790	Maylandia_zebra
ENSPCOG00000026201	RBM38	100	95.082	ENSMAUG00000021211	Rbm38	100	92.917	Mesocricetus_auratus
ENSPCOG00000026201	RBM38	90	98.148	ENSMICG00000038011	RBM38	100	98.148	Microcebus_murinus
ENSPCOG00000026201	RBM38	100	92.623	ENSMOCG00000008715	Rbm38	100	92.083	Microtus_ochrogaster
ENSPCOG00000026201	RBM38	86	87.850	ENSMMOG00000020051	-	99	66.255	Mola_mola
ENSPCOG00000026201	RBM38	100	87.705	ENSMODG00000016458	RBM38	100	79.752	Monodelphis_domestica
ENSPCOG00000026201	RBM38	81	90.099	ENSMALG00000004680	RBM38	70	73.545	Monopterus_albus
ENSPCOG00000026201	RBM38	84	78.641	ENSMALG00000022327	rbm38	69	69.182	Monopterus_albus
ENSPCOG00000026201	RBM38	100	93.443	MGP_CAROLIEiJ_G0024745	Rbm38	100	92.917	Mus_caroli
ENSPCOG00000026201	RBM38	100	93.443	ENSMUSG00000027510	Rbm38	100	93.333	Mus_musculus
ENSPCOG00000026201	RBM38	100	94.262	MGP_PahariEiJ_G0026186	Rbm38	100	93.333	Mus_pahari
ENSPCOG00000026201	RBM38	100	93.443	MGP_SPRETEiJ_G0025665	Rbm38	100	92.917	Mus_spretus
ENSPCOG00000026201	RBM38	80	98.980	ENSMPUG00000006518	RBM38	93	97.326	Mustela_putorius_furo
ENSPCOG00000026201	RBM38	90	89.815	ENSMLUG00000011140	RBM38	100	89.815	Myotis_lucifugus
ENSPCOG00000026201	RBM38	61	92.000	ENSNGAG00000014017	-	64	92.000	Nannospalax_galili
ENSPCOG00000026201	RBM38	94	77.586	ENSNBRG00000022685	rbm38	99	58.300	Neolamprologus_brichardi
ENSPCOG00000026201	RBM38	77	94.681	ENSNBRG00000022545	-	92	67.382	Neolamprologus_brichardi
ENSPCOG00000026201	RBM38	100	81.967	ENSMEUG00000005475	-	100	79.137	Notamacropus_eugenii
ENSPCOG00000026201	RBM38	100	99.180	ENSODEG00000007980	RBM38	100	95.833	Octodon_degus
ENSPCOG00000026201	RBM38	84	81.731	ENSONIG00000017073	rbm38	96	57.261	Oreochromis_niloticus
ENSPCOG00000026201	RBM38	77	94.681	ENSONIG00000020324	-	92	67.241	Oreochromis_niloticus
ENSPCOG00000026201	RBM38	88	89.720	ENSOANG00000009259	RBM38	90	77.637	Ornithorhynchus_anatinus
ENSPCOG00000026201	RBM38	81	89.109	ENSORLG00000027180	-	92	66.094	Oryzias_latipes
ENSPCOG00000026201	RBM38	80	84.848	ENSORLG00000012154	rbm38	91	55.556	Oryzias_latipes
ENSPCOG00000026201	RBM38	83	83.333	ENSORLG00020017871	rbm38	95	55.556	Oryzias_latipes_hni
ENSPCOG00000026201	RBM38	81	89.109	ENSORLG00020020751	-	95	63.710	Oryzias_latipes_hni
ENSPCOG00000026201	RBM38	77	93.617	ENSORLG00015017040	-	92	66.524	Oryzias_latipes_hsok
ENSPCOG00000026201	RBM38	94	78.261	ENSORLG00015012606	rbm38	97	57.627	Oryzias_latipes_hsok
ENSPCOG00000026201	RBM38	77	93.617	ENSOMEG00000023912	-	92	65.517	Oryzias_melastigma
ENSPCOG00000026201	RBM38	83	82.353	ENSOMEG00000006805	rbm38	91	55.983	Oryzias_melastigma
ENSPCOG00000026201	RBM38	100	100.000	ENSOGAG00000029136	RBM38	100	96.667	Otolemur_garnettii
ENSPCOG00000026201	RBM38	100	97.541	ENSPPRG00000009507	RBM38	100	97.541	Panthera_pardus
ENSPCOG00000026201	RBM38	80	100.000	ENSPTRG00000045845	-	68	99.194	Pan_troglodytes
ENSPCOG00000026201	RBM38	100	98.361	ENSPTRG00000013661	RBM38	100	98.361	Pan_troglodytes
ENSPCOG00000026201	RBM38	98	73.932	ENSPANG00000033127	-	100	71.548	Papio_anubis
ENSPCOG00000026201	RBM38	100	99.180	ENSPANG00000020919	-	100	99.180	Papio_anubis
ENSPCOG00000026201	RBM38	82	92.079	ENSPKIG00000018122	-	100	88.034	Paramormyrops_kingsleyae
ENSPCOG00000026201	RBM38	82	86.538	ENSPKIG00000025417	rbm38	97	64.286	Paramormyrops_kingsleyae
ENSPCOG00000026201	RBM38	81	94.949	ENSPSIG00000011649	RBM38	93	82.192	Pelodiscus_sinensis
ENSPCOG00000026201	RBM38	77	87.234	ENSPMGG00000017094	-	92	62.821	Periophthalmus_magnuspinnatus
ENSPCOG00000026201	RBM38	84	82.524	ENSPMGG00000011343	rbm38	96	57.202	Periophthalmus_magnuspinnatus
ENSPCOG00000026201	RBM38	100	87.705	ENSPCIG00000013648	RBM38	100	78.926	Phascolarctos_cinereus
ENSPCOG00000026201	RBM38	77	90.426	ENSPFOG00000011658	rbm38	91	57.692	Poecilia_formosa
ENSPCOG00000026201	RBM38	77	95.745	ENSPLAG00000002500	-	92	68.511	Poecilia_latipinna
ENSPCOG00000026201	RBM38	77	90.426	ENSPLAG00000005218	rbm38	91	57.692	Poecilia_latipinna
ENSPCOG00000026201	RBM38	77	90.426	ENSPMEG00000015770	rbm38	91	57.692	Poecilia_mexicana
ENSPCOG00000026201	RBM38	77	90.426	ENSPREG00000007398	rbm38	91	58.120	Poecilia_reticulata
ENSPCOG00000026201	RBM38	100	66.667	ENSPVAG00000006457	RBM38	100	66.667	Pteropus_vampyrus
ENSPCOG00000026201	RBM38	80	93.939	ENSPNYG00000019727	-	100	88.889	Pundamilia_nyererei
ENSPCOG00000026201	RBM38	89	77.982	ENSPNYG00000021373	rbm38	97	58.506	Pundamilia_nyererei
ENSPCOG00000026201	RBM38	81	91.089	ENSPNAG00000015123	-	96	78.788	Pygocentrus_nattereri
ENSPCOG00000026201	RBM38	79	91.667	ENSPNAG00000010596	rbm38	88	65.258	Pygocentrus_nattereri
ENSPCOG00000026201	RBM38	100	94.262	ENSRNOG00000006420	Rbm38	100	93.333	Rattus_norvegicus
ENSPCOG00000026201	RBM38	100	87.705	ENSRROG00000036388	-	100	78.333	Rhinopithecus_roxellana
ENSPCOG00000026201	RBM38	89	99.074	ENSSBOG00000031053	RBM38	100	99.074	Saimiri_boliviensis_boliviensis
ENSPCOG00000026201	RBM38	77	93.617	ENSSFOG00015004453	rbm38	92	69.545	Scleropages_formosus
ENSPCOG00000026201	RBM38	84	83.495	ENSSDUG00000022611	rbm38	91	59.657	Seriola_dumerili
ENSPCOG00000026201	RBM38	77	93.617	ENSSDUG00000021082	RBM38	92	66.524	Seriola_dumerili
ENSPCOG00000026201	RBM38	77	93.617	ENSSLDG00000011778	RBM38	92	66.524	Seriola_lalandi_dorsalis
ENSPCOG00000026201	RBM38	84	83.495	ENSSLDG00000010845	rbm38	90	63.256	Seriola_lalandi_dorsalis
ENSPCOG00000026201	RBM38	84	83.495	ENSSPAG00000011113	rbm38	91	58.369	Stegastes_partitus
ENSPCOG00000026201	RBM38	81	89.109	ENSSPAG00000020989	RBM38	91	69.302	Stegastes_partitus
ENSPCOG00000026201	RBM38	100	98.361	ENSSSCG00000007504	RBM38	100	96.667	Sus_scrofa
ENSPCOG00000026201	RBM38	77	93.617	ENSTRUG00000019869	-	92	66.953	Takifugu_rubripes
ENSPCOG00000026201	RBM38	84	82.692	ENSTRUG00000024954	rbm38	91	56.332	Takifugu_rubripes
ENSPCOG00000026201	RBM38	77	94.681	ENSTNIG00000007093	-	97	70.270	Tetraodon_nigroviridis
ENSPCOG00000026201	RBM38	98	89.167	ENSTBEG00000001689	-	50	89.167	Tupaia_belangeri
ENSPCOG00000026201	RBM38	100	98.361	ENSUAMG00000019780	RBM38	100	96.667	Ursus_americanus
ENSPCOG00000026201	RBM38	100	98.361	ENSVVUG00000017246	RBM38	100	95.833	Vulpes_vulpes
ENSPCOG00000026201	RBM38	80	91.837	ENSXETG00000011268	rbm38	99	74.775	Xenopus_tropicalis
ENSPCOG00000026201	RBM38	77	95.745	ENSXCOG00000017324	-	53	86.325	Xiphophorus_couchianus
ENSPCOG00000026201	RBM38	76	91.398	ENSXMAG00000023662	rbm38	91	57.940	Xiphophorus_maculatus