EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000026327 (Gene tree)
Gene ID: 105820246
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 22651 bases
Position: chrKQ025014.1:877997-900647
Accession: 105820246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000027597	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000038435	RAB5C-201	1684	XM_012656698	ENSPCOP00000027597	216 (aa)	XP_012512152	A0A2K6GN16

Gene Model

Click here to download ENSPCOG00000026327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000026327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000026327	RAB5C	88	33.333	ENSPCOG00000008605	-	76	36.747
ENSPCOG00000026327	RAB5C	91	45.918	ENSPCOG00000022692	RAB31	98	45.918
ENSPCOG00000026327	RAB5C	73	36.875	ENSPCOG00000027432	RAB36	52	36.875
ENSPCOG00000026327	RAB5C	89	44.845	ENSPCOG00000025845	RAB1B	96	44.845
ENSPCOG00000026327	RAB5C	89	43.590	ENSPCOG00000017244	RAB1A	95	43.590
ENSPCOG00000026327	RAB5C	89	37.879	ENSPCOG00000014314	RAB33B	86	37.879
ENSPCOG00000026327	RAB5C	75	42.236	ENSPCOG00000012189	-	80	42.236
ENSPCOG00000026327	RAB5C	81	37.143	ENSPCOG00000009241	RAB15	95	35.149
ENSPCOG00000026327	RAB5C	81	34.254	ENSPCOG00000021838	HRAS	94	34.254
ENSPCOG00000026327	RAB5C	75	40.361	ENSPCOG00000028877	RAB33A	70	40.361
ENSPCOG00000026327	RAB5C	89	34.848	ENSPCOG00000002853	RAB9B	97	34.848
ENSPCOG00000026327	RAB5C	81	36.571	ENSPCOG00000028471	RAB23	73	36.571
ENSPCOG00000026327	RAB5C	90	40.887	ENSPCOG00000005144	RAB25	94	40.887
ENSPCOG00000026327	RAB5C	55	31.967	ENSPCOG00000013027	ARL8B	62	31.967
ENSPCOG00000026327	RAB5C	85	41.799	ENSPCOG00000018906	RAB18	93	40.909
ENSPCOG00000026327	RAB5C	63	48.889	ENSPCOG00000008655	-	92	48.889
ENSPCOG00000026327	RAB5C	87	38.830	ENSPCOG00000020717	RAB2A	92	37.949
ENSPCOG00000026327	RAB5C	83	39.459	ENSPCOG00000017316	RAB30	91	39.459
ENSPCOG00000026327	RAB5C	81	44.000	ENSPCOG00000021991	RAB6A	84	44.000
ENSPCOG00000026327	RAB5C	90	40.865	ENSPCOG00000016536	-	94	40.865
ENSPCOG00000026327	RAB5C	100	87.963	ENSPCOG00000013289	RAB5A	100	87.963
ENSPCOG00000026327	RAB5C	90	42.512	ENSPCOG00000028053	RAB11B	96	41.951
ENSPCOG00000026327	RAB5C	55	31.148	ENSPCOG00000024352	ARL8A	62	31.148
ENSPCOG00000026327	RAB5C	94	41.379	ENSPCOG00000018146	RAB6B	98	41.379
ENSPCOG00000026327	RAB5C	97	85.646	ENSPCOG00000016461	RAB5B	97	85.646
ENSPCOG00000026327	RAB5C	75	37.195	ENSPCOG00000013225	RAB39B	77	37.195
ENSPCOG00000026327	RAB5C	73	31.875	ENSPCOG00000021648	RAB34	62	31.875
ENSPCOG00000026327	RAB5C	72	33.121	ENSPCOG00000015977	RHEB	85	33.121
ENSPCOG00000026327	RAB5C	71	36.601	ENSPCOG00000024865	-	65	36.601
ENSPCOG00000026327	RAB5C	87	37.368	ENSPCOG00000019816	RAB12	76	36.170
ENSPCOG00000026327	RAB5C	89	37.949	ENSPCOG00000026153	RAB35	96	37.949
ENSPCOG00000026327	RAB5C	86	39.247	ENSPCOG00000017682	RAB14	87	39.247
ENSPCOG00000026327	RAB5C	90	48.454	ENSPCOG00000019205	RAB22A	98	48.454
ENSPCOG00000026327	RAB5C	75	32.515	ENSPCOG00000013517	NRAS	85	32.515
ENSPCOG00000026327	RAB5C	90	42.512	ENSPCOG00000015802	-	94	42.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000026327	RAB5C	100	98.148	ENSG00000108774	RAB5C	100	99.194	Homo_sapiens
ENSPCOG00000026327	RAB5C	99	88.837	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSPCOG00000026327	RAB5C	100	98.148	ENSAMEG00000006003	RAB5C	100	98.148	Ailuropoda_melanoleuca
ENSPCOG00000026327	RAB5C	99	88.426	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSPCOG00000026327	RAB5C	99	88.889	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSPCOG00000026327	RAB5C	97	88.626	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSPCOG00000026327	RAB5C	100	89.450	ENSATEG00000001937	rab5c	100	90.367	Anabas_testudineus
ENSPCOG00000026327	RAB5C	94	98.529	ENSANAG00000025390	RAB5C	100	98.529	Aotus_nancymaae
ENSPCOG00000026327	RAB5C	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSPCOG00000026327	RAB5C	99	87.500	ENSACLG00000002706	rab5c	98	89.815	Astatotilapia_calliptera
ENSPCOG00000026327	RAB5C	96	88.095	ENSAMXG00000037267	-	99	90.000	Astyanax_mexicanus
ENSPCOG00000026327	RAB5C	99	89.401	ENSAMXG00000043717	rab5c	98	91.244	Astyanax_mexicanus
ENSPCOG00000026327	RAB5C	100	98.148	ENSBTAG00000006982	RAB5C	100	98.148	Bos_taurus
ENSPCOG00000026327	RAB5C	99	75.814	WBGene00004268	rab-5	99	75.814	Caenorhabditis_elegans
ENSPCOG00000026327	RAB5C	100	97.685	ENSCAFG00000015629	RAB5C	100	97.685	Canis_familiaris
ENSPCOG00000026327	RAB5C	100	97.685	ENSCAFG00020013537	RAB5C	100	97.685	Canis_lupus_dingo
ENSPCOG00000026327	RAB5C	100	98.148	ENSCHIG00000012960	RAB5C	100	98.148	Capra_hircus
ENSPCOG00000026327	RAB5C	100	98.611	ENSTSYG00000030531	RAB5C	100	98.611	Carlito_syrichta
ENSPCOG00000026327	RAB5C	100	98.148	ENSCCAG00000025940	RAB5C	100	98.148	Cebus_capucinus
ENSPCOG00000026327	RAB5C	100	98.148	ENSCATG00000040873	RAB5C	100	98.148	Cercocebus_atys
ENSPCOG00000026327	RAB5C	100	96.296	ENSCLAG00000016650	RAB5C	100	96.296	Chinchilla_lanigera
ENSPCOG00000026327	RAB5C	82	98.315	ENSCHOG00000009886	RAB5C	100	98.315	Choloepus_hoffmanni
ENSPCOG00000026327	RAB5C	99	77.103	ENSCING00000003340	-	99	77.103	Ciona_intestinalis
ENSPCOG00000026327	RAB5C	99	75.455	ENSCSAVG00000000613	-	99	83.951	Ciona_savignyi
ENSPCOG00000026327	RAB5C	100	97.222	ENSCGRG00001014226	Rab5c	100	97.222	Cricetulus_griseus_chok1gshd
ENSPCOG00000026327	RAB5C	100	97.222	ENSCGRG00000007534	Rab5c	100	97.222	Cricetulus_griseus_crigri
ENSPCOG00000026327	RAB5C	99	90.278	ENSCSEG00000017024	rab5c	98	90.278	Cynoglossus_semilaevis
ENSPCOG00000026327	RAB5C	99	88.889	ENSCVAG00000009550	rab5c	98	90.741	Cyprinodon_variegatus
ENSPCOG00000026327	RAB5C	100	98.148	ENSDNOG00000038853	RAB5C	100	98.148	Dasypus_novemcinctus
ENSPCOG00000026327	RAB5C	100	98.148	ENSDORG00000006819	Rab5c	100	98.148	Dipodomys_ordii
ENSPCOG00000026327	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSPCOG00000026327	RAB5C	99	78.605	ENSEBUG00000014794	rab5c	100	78.605	Eptatretus_burgeri
ENSPCOG00000026327	RAB5C	100	98.148	ENSEASG00005009281	RAB5C	100	98.148	Equus_asinus_asinus
ENSPCOG00000026327	RAB5C	100	98.611	ENSECAG00000025054	RAB5C	100	98.611	Equus_caballus
ENSPCOG00000026327	RAB5C	100	98.148	ENSEEUG00000002790	RAB5C	100	98.148	Erinaceus_europaeus
ENSPCOG00000026327	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	89.352	Esox_lucius
ENSPCOG00000026327	RAB5C	99	87.963	ENSELUG00000010439	-	98	87.963	Esox_lucius
ENSPCOG00000026327	RAB5C	100	98.148	ENSFCAG00000002148	RAB5C	100	98.148	Felis_catus
ENSPCOG00000026327	RAB5C	100	94.907	ENSFDAG00000021541	RAB5C	100	94.907	Fukomys_damarensis
ENSPCOG00000026327	RAB5C	99	88.889	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSPCOG00000026327	RAB5C	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSPCOG00000026327	RAB5C	80	86.628	ENSGMOG00000001876	-	99	86.628	Gadus_morhua
ENSPCOG00000026327	RAB5C	99	87.500	ENSGMOG00000015096	rab5c	98	89.815	Gadus_morhua
ENSPCOG00000026327	RAB5C	96	90.952	ENSGAFG00000003642	-	99	88.182	Gambusia_affinis
ENSPCOG00000026327	RAB5C	99	88.889	ENSGAFG00000000884	rab5c	98	90.741	Gambusia_affinis
ENSPCOG00000026327	RAB5C	87	94.149	ENSGACG00000008659	rab5c	98	86.574	Gasterosteus_aculeatus
ENSPCOG00000026327	RAB5C	100	98.148	ENSGGOG00000005472	RAB5C	100	98.148	Gorilla_gorilla
ENSPCOG00000026327	RAB5C	99	87.500	ENSHBUG00000002014	rab5c	98	89.815	Haplochromis_burtoni
ENSPCOG00000026327	RAB5C	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSPCOG00000026327	RAB5C	100	95.833	ENSHGLG00000012067	RAB5C	100	95.833	Heterocephalus_glaber_female
ENSPCOG00000026327	RAB5C	99	89.401	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSPCOG00000026327	RAB5C	97	81.604	ENSHCOG00000020238	-	100	80.000	Hippocampus_comes
ENSPCOG00000026327	RAB5C	96	87.619	ENSIPUG00000020082	rab5c	98	88.073	Ictalurus_punctatus
ENSPCOG00000026327	RAB5C	100	96.759	ENSSTOG00000006620	RAB5C	100	96.759	Ictidomys_tridecemlineatus
ENSPCOG00000026327	RAB5C	100	98.148	ENSJJAG00000021181	Rab5c	100	98.148	Jaculus_jaculus
ENSPCOG00000026327	RAB5C	99	88.940	ENSKMAG00000017417	-	99	88.940	Kryptolebias_marmoratus
ENSPCOG00000026327	RAB5C	99	88.426	ENSKMAG00000020038	rab5c	98	90.278	Kryptolebias_marmoratus
ENSPCOG00000026327	RAB5C	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSPCOG00000026327	RAB5C	99	89.352	ENSLBEG00000004128	rab5c	98	91.204	Labrus_bergylta
ENSPCOG00000026327	RAB5C	99	92.991	ENSLOCG00000012566	rab5c	100	92.991	Lepisosteus_oculatus
ENSPCOG00000026327	RAB5C	100	98.148	ENSMFAG00000039627	RAB5C	100	98.148	Macaca_fascicularis
ENSPCOG00000026327	RAB5C	100	98.148	ENSMNEG00000000355	RAB5C	100	98.148	Macaca_nemestrina
ENSPCOG00000026327	RAB5C	99	87.963	ENSMAMG00000022322	rab5c	98	89.815	Mastacembelus_armatus
ENSPCOG00000026327	RAB5C	99	88.018	ENSMAMG00000016207	-	99	88.018	Mastacembelus_armatus
ENSPCOG00000026327	RAB5C	99	87.500	ENSMZEG00005022735	rab5c	98	89.815	Maylandia_zebra
ENSPCOG00000026327	RAB5C	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSPCOG00000026327	RAB5C	100	98.148	ENSMAUG00000015005	Rab5c	100	98.148	Mesocricetus_auratus
ENSPCOG00000026327	RAB5C	100	99.074	ENSMICG00000041608	RAB5C	100	99.074	Microcebus_murinus
ENSPCOG00000026327	RAB5C	100	97.222	ENSMOCG00000018531	-	100	97.222	Microtus_ochrogaster
ENSPCOG00000026327	RAB5C	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSPCOG00000026327	RAB5C	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSPCOG00000026327	RAB5C	97	83.412	ENSMALG00000006052	rab5c	96	83.256	Monopterus_albus
ENSPCOG00000026327	RAB5C	100	97.685	MGP_CAROLIEiJ_G0017184	Rab5c	100	97.685	Mus_caroli
ENSPCOG00000026327	RAB5C	100	97.685	ENSMUSG00000019173	Rab5c	100	97.685	Mus_musculus
ENSPCOG00000026327	RAB5C	100	97.685	MGP_PahariEiJ_G0018314	Rab5c	100	97.685	Mus_pahari
ENSPCOG00000026327	RAB5C	100	97.685	MGP_SPRETEiJ_G0018027	Rab5c	100	97.685	Mus_spretus
ENSPCOG00000026327	RAB5C	100	98.148	ENSMPUG00000010554	RAB5C	100	98.148	Mustela_putorius_furo
ENSPCOG00000026327	RAB5C	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSPCOG00000026327	RAB5C	99	88.426	ENSNBRG00000018165	rab5c	98	90.741	Neolamprologus_brichardi
ENSPCOG00000026327	RAB5C	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSPCOG00000026327	RAB5C	82	91.573	ENSOPRG00000008255	RAB5C	100	91.573	Ochotona_princeps
ENSPCOG00000026327	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSPCOG00000026327	RAB5C	99	88.426	ENSONIG00000001113	rab5c	98	90.741	Oreochromis_niloticus
ENSPCOG00000026327	RAB5C	100	88.073	ENSORLG00000003882	rab5c	100	88.991	Oryzias_latipes
ENSPCOG00000026327	RAB5C	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSPCOG00000026327	RAB5C	100	88.073	ENSORLG00015021900	rab5c	100	88.991	Oryzias_latipes_hsok
ENSPCOG00000026327	RAB5C	100	88.073	ENSOMEG00000023078	rab5c	100	88.991	Oryzias_melastigma
ENSPCOG00000026327	RAB5C	100	98.148	ENSOGAG00000009456	RAB5C	100	98.148	Otolemur_garnettii
ENSPCOG00000026327	RAB5C	100	98.148	ENSOARG00000018768	RAB5C	100	98.148	Ovis_aries
ENSPCOG00000026327	RAB5C	100	98.148	ENSPPAG00000037206	RAB5C	100	98.148	Pan_paniscus
ENSPCOG00000026327	RAB5C	100	98.148	ENSPPRG00000005745	RAB5C	100	98.148	Panthera_pardus
ENSPCOG00000026327	RAB5C	100	98.148	ENSPTIG00000008177	RAB5C	100	98.148	Panthera_tigris_altaica
ENSPCOG00000026327	RAB5C	100	98.148	ENSPTRG00000009194	RAB5C	100	98.148	Pan_troglodytes
ENSPCOG00000026327	RAB5C	99	87.500	ENSPKIG00000020112	-	99	87.500	Paramormyrops_kingsleyae
ENSPCOG00000026327	RAB5C	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSPCOG00000026327	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	89.573	Periophthalmus_magnuspinnatus
ENSPCOG00000026327	RAB5C	100	97.222	ENSPEMG00000017971	Rab5c	100	97.222	Peromyscus_maniculatus_bairdii
ENSPCOG00000026327	RAB5C	99	79.070	ENSPMAG00000001399	rab5c	100	79.070	Petromyzon_marinus
ENSPCOG00000026327	RAB5C	99	77.232	ENSPMAG00000000008	rab5c	100	77.232	Petromyzon_marinus
ENSPCOG00000026327	RAB5C	99	78.037	ENSPMAG00000007867	rab5c	99	78.037	Petromyzon_marinus
ENSPCOG00000026327	RAB5C	100	96.296	ENSPCIG00000020225	-	100	96.296	Phascolarctos_cinereus
ENSPCOG00000026327	RAB5C	99	88.889	ENSPLAG00000004790	rab5c	98	90.741	Poecilia_latipinna
ENSPCOG00000026327	RAB5C	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSPCOG00000026327	RAB5C	98	88.263	ENSPMEG00000012614	-	98	88.584	Poecilia_mexicana
ENSPCOG00000026327	RAB5C	99	88.889	ENSPMEG00000011336	rab5c	98	90.741	Poecilia_mexicana
ENSPCOG00000026327	RAB5C	87	92.063	ENSPREG00000022167	-	89	93.443	Poecilia_reticulata
ENSPCOG00000026327	RAB5C	99	88.889	ENSPREG00000010146	rab5c	98	90.741	Poecilia_reticulata
ENSPCOG00000026327	RAB5C	100	98.148	ENSPPYG00000008398	RAB5C	100	98.148	Pongo_abelii
ENSPCOG00000026327	RAB5C	100	97.685	ENSPCAG00000016412	RAB5C	100	97.685	Procavia_capensis
ENSPCOG00000026327	RAB5C	100	98.611	ENSPVAG00000003867	RAB5C	100	98.611	Pteropus_vampyrus
ENSPCOG00000026327	RAB5C	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSPCOG00000026327	RAB5C	99	87.500	ENSPNYG00000010615	rab5c	98	89.815	Pundamilia_nyererei
ENSPCOG00000026327	RAB5C	99	91.244	ENSPNAG00000028138	rab5c	98	91.244	Pygocentrus_nattereri
ENSPCOG00000026327	RAB5C	97	86.321	ENSPNAG00000002218	-	99	88.208	Pygocentrus_nattereri
ENSPCOG00000026327	RAB5C	100	98.148	ENSRNOG00000018568	Rab5c	100	98.148	Rattus_norvegicus
ENSPCOG00000026327	RAB5C	100	98.148	ENSRBIG00000031376	RAB5C	100	98.148	Rhinopithecus_bieti
ENSPCOG00000026327	RAB5C	100	98.148	ENSRROG00000032895	RAB5C	100	98.148	Rhinopithecus_roxellana
ENSPCOG00000026327	RAB5C	100	98.148	ENSSBOG00000032552	-	100	98.148	Saimiri_boliviensis_boliviensis
ENSPCOG00000026327	RAB5C	100	96.759	ENSSHAG00000005267	-	100	96.759	Sarcophilus_harrisii
ENSPCOG00000026327	RAB5C	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSPCOG00000026327	RAB5C	96	92.308	ENSSMAG00000007323	rab5c	98	90.278	Scophthalmus_maximus
ENSPCOG00000026327	RAB5C	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSPCOG00000026327	RAB5C	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSPCOG00000026327	RAB5C	100	95.370	ENSSPUG00000012950	-	100	95.370	Sphenodon_punctatus
ENSPCOG00000026327	RAB5C	99	89.352	ENSSPAG00000006436	rab5c	98	91.667	Stegastes_partitus
ENSPCOG00000026327	RAB5C	100	98.148	ENSSSCG00000032467	RAB5C	100	98.148	Sus_scrofa
ENSPCOG00000026327	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	89.815	Takifugu_rubripes
ENSPCOG00000026327	RAB5C	96	89.952	ENSTNIG00000011711	rab5c	95	89.952	Tetraodon_nigroviridis
ENSPCOG00000026327	RAB5C	100	98.148	ENSTBEG00000007092	RAB5C	100	98.148	Tupaia_belangeri
ENSPCOG00000026327	RAB5C	100	97.222	ENSTTRG00000006673	RAB5C	100	97.222	Tursiops_truncatus
ENSPCOG00000026327	RAB5C	100	98.148	ENSUAMG00000024343	RAB5C	100	98.148	Ursus_americanus
ENSPCOG00000026327	RAB5C	100	98.148	ENSUMAG00000023270	RAB5C	100	98.148	Ursus_maritimus
ENSPCOG00000026327	RAB5C	96	91.429	ENSXCOG00000006300	-	99	88.235	Xiphophorus_couchianus
ENSPCOG00000026327	RAB5C	99	88.426	ENSXCOG00000016788	rab5c	98	90.741	Xiphophorus_couchianus
ENSPCOG00000026327	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus
ENSPCOG00000026327	RAB5C	99	88.889	ENSXMAG00000003266	rab5c	98	90.741	Xiphophorus_maculatus