EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000026433 (Gene tree)
Gene ID: 105816231
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 42
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 7851 bases
Position: chrKQ023269.1:1313770-1321620
Accession: 105816231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000027805	RRM_1	PF00076.22	6.2e-18	1	1
ENSPCOP00000027799	RRM_1	PF00076.22	6.9e-18	1	1
ENSPCOP00000027798	RRM_1	PF00076.22	7.4e-18	1	1
ENSPCOP00000027807	RRM_1	PF00076.22	6.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000038653	-	1434	XM_012651588	ENSPCOP00000027798	477 (aa)	XP_012507042	A0A2K6GNI3
ENSPCOT00000038661	-	1152	-	ENSPCOP00000027806	383 (aa)	-	A0A2K6GNI2
ENSPCOT00000038660	-	1272	-	ENSPCOP00000027805	423 (aa)	-	A0A2K6GNI1
ENSPCOT00000038654	-	1368	XM_012651590	ENSPCOP00000027799	455 (aa)	XP_012507044	A0A2K6GNK4
ENSPCOT00000038662	-	546	-	ENSPCOP00000027807	181 (aa)	-	A0A2K6GNM5

Gene Model

Click here to download ENSPCOG00000026433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000026433's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000026433	-	97	76.744	ENSPCOG00000020672	RBM42	81	99.700

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000026433	-	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSPCOG00000026433	-	100	100.000	ENSAMEG00000000524	RBM42	100	98.747	Ailuropoda_melanoleuca
ENSPCOG00000026433	-	85	95.775	ENSACAG00000005495	RBM42	99	57.884	Anolis_carolinensis
ENSPCOG00000026433	-	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSPCOG00000026433	-	100	100.000	ENSBTAG00000013440	RBM42	100	98.901	Bos_taurus
ENSPCOG00000026433	-	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSPCOG00000026433	-	100	100.000	ENSCAFG00020018628	RBM42	100	96.739	Canis_lupus_dingo
ENSPCOG00000026433	-	100	100.000	ENSCHIG00000009518	RBM42	100	97.904	Capra_hircus
ENSPCOG00000026433	-	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSPCOG00000026433	-	81	98.446	ENSCAPG00000009566	RBM42	99	98.446	Cavia_aperea
ENSPCOG00000026433	-	100	100.000	ENSCPOG00000012365	RBM42	99	98.532	Cavia_porcellus
ENSPCOG00000026433	-	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSPCOG00000026433	-	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSPCOG00000026433	-	100	100.000	ENSCLAG00000012865	RBM42	99	97.904	Chinchilla_lanigera
ENSPCOG00000026433	-	100	100.000	ENSCSAG00000004422	RBM42	100	96.943	Chlorocebus_sabaeus
ENSPCOG00000026433	-	100	88.679	ENSCANG00000030272	RBM42	100	88.679	Colobus_angolensis_palliatus
ENSPCOG00000026433	-	100	100.000	ENSCGRG00001018540	Rbm42	99	97.904	Cricetulus_griseus_chok1gshd
ENSPCOG00000026433	-	100	100.000	ENSDNOG00000037397	RBM42	100	97.708	Dasypus_novemcinctus
ENSPCOG00000026433	-	100	97.484	ENSDORG00000013001	Rbm42	99	97.484	Dipodomys_ordii
ENSPCOG00000026433	-	93	94.203	ENSETEG00000007878	RBM42	74	94.203	Echinops_telfairi
ENSPCOG00000026433	-	100	100.000	ENSEASG00005001074	RBM42	100	97.363	Equus_asinus_asinus
ENSPCOG00000026433	-	100	100.000	ENSECAG00000018215	RBM42	100	97.363	Equus_caballus
ENSPCOG00000026433	-	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSPCOG00000026433	-	100	100.000	ENSFDAG00000007440	RBM42	99	96.868	Fukomys_damarensis
ENSPCOG00000026433	-	73	97.183	ENSGAGG00000014805	RBM42	64	92.086	Gopherus_agassizii
ENSPCOG00000026433	-	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSPCOG00000026433	-	100	96.436	ENSHGLG00000008418	RBM42	99	96.436	Heterocephalus_glaber_female
ENSPCOG00000026433	-	100	96.436	ENSHGLG00100018667	RBM42	99	96.436	Heterocephalus_glaber_male
ENSPCOG00000026433	-	100	100.000	ENSSTOG00000013050	RBM42	100	97.694	Ictidomys_tridecemlineatus
ENSPCOG00000026433	-	100	100.000	ENSJJAG00000010421	Rbm42	99	96.855	Jaculus_jaculus
ENSPCOG00000026433	-	100	96.436	ENSLAFG00000014993	RBM42	99	96.436	Loxodonta_africana
ENSPCOG00000026433	-	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSPCOG00000026433	-	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSPCOG00000026433	-	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSPCOG00000026433	-	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSPCOG00000026433	-	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSPCOG00000026433	-	100	100.000	ENSMOCG00000000405	Rbm42	99	97.694	Microtus_ochrogaster
ENSPCOG00000026433	-	83	100.000	ENSMODG00000013957	RBM42	83	82.474	Monodelphis_domestica
ENSPCOG00000026433	-	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.904	Mus_caroli
ENSPCOG00000026433	-	100	100.000	ENSMUSG00000036733	Rbm42	99	97.904	Mus_musculus
ENSPCOG00000026433	-	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.904	Mus_pahari
ENSPCOG00000026433	-	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.904	Mus_spretus
ENSPCOG00000026433	-	100	100.000	ENSMPUG00000006288	RBM42	100	98.022	Mustela_putorius_furo
ENSPCOG00000026433	-	100	100.000	ENSMLUG00000011334	RBM42	100	97.904	Myotis_lucifugus
ENSPCOG00000026433	-	100	100.000	ENSNGAG00000019698	Rbm42	99	97.694	Nannospalax_galili
ENSPCOG00000026433	-	71	99.669	ENSNLEG00000011272	-	94	91.899	Nomascus_leucogenys
ENSPCOG00000026433	-	90	100.000	ENSMEUG00000016300	RBM42	100	82.305	Notamacropus_eugenii
ENSPCOG00000026433	-	100	100.000	ENSOPRG00000001229	RBM42	100	92.662	Ochotona_princeps
ENSPCOG00000026433	-	100	100.000	ENSODEG00000013705	RBM42	99	98.113	Octodon_degus
ENSPCOG00000026433	-	100	100.000	ENSOCUG00000003337	RBM42	100	96.507	Oryctolagus_cuniculus
ENSPCOG00000026433	-	100	100.000	ENSOGAG00000004144	RBM42	100	97.904	Otolemur_garnettii
ENSPCOG00000026433	-	99	100.000	ENSOARG00000004926	RBM42	98	93.487	Ovis_aries
ENSPCOG00000026433	-	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSPCOG00000026433	-	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSPCOG00000026433	-	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSPCOG00000026433	-	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSPCOG00000026433	-	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSPCOG00000026433	-	100	100.000	ENSPEMG00000012065	Rbm42	99	98.323	Peromyscus_maniculatus_bairdii
ENSPCOG00000026433	-	100	100.000	ENSPCIG00000015737	RBM42	100	82.680	Phascolarctos_cinereus
ENSPCOG00000026433	-	100	100.000	ENSPPYG00000009871	RBM42	100	97.732	Pongo_abelii
ENSPCOG00000026433	-	90	100.000	ENSPCAG00000013053	RBM42	88	95.604	Procavia_capensis
ENSPCOG00000026433	-	100	100.000	ENSPVAG00000012815	RBM42	100	98.952	Pteropus_vampyrus
ENSPCOG00000026433	-	100	100.000	ENSRNOG00000024278	Rbm42	99	98.113	Rattus_norvegicus
ENSPCOG00000026433	-	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSPCOG00000026433	-	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSPCOG00000026433	-	90	98.947	ENSSBOG00000030666	RBM42	100	99.261	Saimiri_boliviensis_boliviensis
ENSPCOG00000026433	-	100	87.708	ENSSARG00000010724	RBM42	100	87.708	Sorex_araneus
ENSPCOG00000026433	-	100	100.000	ENSSSCG00000002905	RBM42	100	97.872	Sus_scrofa
ENSPCOG00000026433	-	100	100.000	ENSUAMG00000020711	RBM42	100	98.952	Ursus_americanus
ENSPCOG00000026433	-	100	100.000	ENSUMAG00000020223	RBM42	100	98.952	Ursus_maritimus
ENSPCOG00000026433	-	100	100.000	ENSVVUG00000015117	RBM42	100	97.484	Vulpes_vulpes