EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000026630 (Gene tree)
Gene ID: 105821301
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 20289 bases
Position: chrKQ025591.1:154647-174935
Accession: 105821301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000028101	PRP21_like_P	PF12230.8	5.8e-52	1	1
ENSPCOP00000028101	Surp	PF01805.20	7.4e-46	1	2
ENSPCOP00000028101	Surp	PF01805.20	7.4e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000038976	SF3A1-201	2942	XM_012657991	ENSPCOP00000028101	792 (aa)	XP_012513445	A0A2K6GPD1

Gene Model

Click here to download ENSPCOG00000026630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000026630's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000026630	SF3A1	100	99.117	ENSG00000099995	SF3A1	100	99.117	Homo_sapiens
ENSPCOG00000026630	SF3A1	100	82.516	ENSAPOG00000020465	sf3a1	99	84.655	Acanthochromis_polyacanthus
ENSPCOG00000026630	SF3A1	100	98.491	ENSAMEG00000007737	SF3A1	100	98.491	Ailuropoda_melanoleuca
ENSPCOG00000026630	SF3A1	100	83.270	ENSACIG00000020672	sf3a1	99	84.783	Amphilophus_citrinellus
ENSPCOG00000026630	SF3A1	100	82.250	ENSAOCG00000003060	sf3a1	99	84.655	Amphiprion_ocellaris
ENSPCOG00000026630	SF3A1	100	82.375	ENSAPEG00000010735	sf3a1	99	84.783	Amphiprion_percula
ENSPCOG00000026630	SF3A1	96	84.766	ENSATEG00000021201	sf3a1	98	85.090	Anabas_testudineus
ENSPCOG00000026630	SF3A1	95	94.188	ENSAPLG00000009057	SF3A1	99	93.161	Anas_platyrhynchos
ENSPCOG00000026630	SF3A1	100	85.591	ENSACAG00000009415	SF3A1	100	86.946	Anolis_carolinensis
ENSPCOG00000026630	SF3A1	100	99.243	ENSANAG00000032045	SF3A1	100	99.243	Aotus_nancymaae
ENSPCOG00000026630	SF3A1	100	84.105	ENSACLG00000012622	sf3a1	99	85.275	Astatotilapia_calliptera
ENSPCOG00000026630	SF3A1	99	82.554	ENSAMXG00000005382	sf3a1	99	84.170	Astyanax_mexicanus
ENSPCOG00000026630	SF3A1	100	99.243	ENSBTAG00000003390	SF3A1	100	99.243	Bos_taurus
ENSPCOG00000026630	SF3A1	84	43.806	WBGene00004188	prp-21	94	43.863	Caenorhabditis_elegans
ENSPCOG00000026630	SF3A1	100	99.369	ENSCJAG00000010370	SF3A1	100	99.369	Callithrix_jacchus
ENSPCOG00000026630	SF3A1	100	98.991	ENSCAFG00000012559	SF3A1	100	98.991	Canis_familiaris
ENSPCOG00000026630	SF3A1	100	98.991	ENSCAFG00020000838	SF3A1	100	98.991	Canis_lupus_dingo
ENSPCOG00000026630	SF3A1	100	99.117	ENSCHIG00000018642	SF3A1	100	99.117	Capra_hircus
ENSPCOG00000026630	SF3A1	100	99.117	ENSTSYG00000004739	SF3A1	100	99.117	Carlito_syrichta
ENSPCOG00000026630	SF3A1	94	81.041	ENSCAPG00000015414	SF3A1	98	81.041	Cavia_aperea
ENSPCOG00000026630	SF3A1	100	98.865	ENSCPOG00000014589	SF3A1	100	98.865	Cavia_porcellus
ENSPCOG00000026630	SF3A1	100	99.243	ENSCCAG00000032006	SF3A1	100	99.243	Cebus_capucinus
ENSPCOG00000026630	SF3A1	100	99.496	ENSCATG00000029241	SF3A1	100	99.496	Cercocebus_atys
ENSPCOG00000026630	SF3A1	100	98.235	ENSCLAG00000006508	SF3A1	100	98.235	Chinchilla_lanigera
ENSPCOG00000026630	SF3A1	100	99.369	ENSCSAG00000009470	SF3A1	100	99.369	Chlorocebus_sabaeus
ENSPCOG00000026630	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSPCOG00000026630	SF3A1	100	90.932	ENSCPBG00000007595	SF3A1	100	91.058	Chrysemys_picta_bellii
ENSPCOG00000026630	SF3A1	94	52.381	ENSCING00000008526	-	66	57.306	Ciona_intestinalis
ENSPCOG00000026630	SF3A1	96	51.809	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSPCOG00000026630	SF3A1	100	99.369	ENSCANG00000033564	SF3A1	100	99.369	Colobus_angolensis_palliatus
ENSPCOG00000026630	SF3A1	100	98.613	ENSCGRG00001008933	Sf3a1	100	98.613	Cricetulus_griseus_chok1gshd
ENSPCOG00000026630	SF3A1	100	98.613	ENSCGRG00000006127	Sf3a1	100	98.613	Cricetulus_griseus_crigri
ENSPCOG00000026630	SF3A1	100	81.533	ENSCSEG00000010792	sf3a1	99	81.923	Cynoglossus_semilaevis
ENSPCOG00000026630	SF3A1	100	82.893	ENSCVAG00000004560	sf3a1	98	84.115	Cyprinodon_variegatus
ENSPCOG00000026630	SF3A1	100	81.658	ENSDARG00000041887	sf3a1	97	84.876	Danio_rerio
ENSPCOG00000026630	SF3A1	100	98.868	ENSDNOG00000010629	SF3A1	100	98.868	Dasypus_novemcinctus
ENSPCOG00000026630	SF3A1	100	98.991	ENSDORG00000005613	Sf3a1	100	98.991	Dipodomys_ordii
ENSPCOG00000026630	SF3A1	83	60.317	FBgn0266917	Sf3a1	85	59.386	Drosophila_melanogaster
ENSPCOG00000026630	SF3A1	89	95.869	ENSETEG00000017194	SF3A1	100	95.869	Echinops_telfairi
ENSPCOG00000026630	SF3A1	98	65.981	ENSEBUG00000001285	sf3a1	96	67.079	Eptatretus_burgeri
ENSPCOG00000026630	SF3A1	100	99.369	ENSEASG00005010254	SF3A1	100	99.369	Equus_asinus_asinus
ENSPCOG00000026630	SF3A1	100	99.369	ENSECAG00000023962	SF3A1	100	99.369	Equus_caballus
ENSPCOG00000026630	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSPCOG00000026630	SF3A1	100	82.183	ENSELUG00000022578	sf3a1	98	82.542	Esox_lucius
ENSPCOG00000026630	SF3A1	100	98.991	ENSFCAG00000011932	SF3A1	100	98.991	Felis_catus
ENSPCOG00000026630	SF3A1	95	93.122	ENSFALG00000006944	SF3A1	100	91.814	Ficedula_albicollis
ENSPCOG00000026630	SF3A1	100	98.739	ENSFDAG00000009560	SF3A1	100	98.739	Fukomys_damarensis
ENSPCOG00000026630	SF3A1	100	84.025	ENSFHEG00000010866	sf3a1	98	85.286	Fundulus_heteroclitus
ENSPCOG00000026630	SF3A1	100	80.982	ENSGMOG00000016024	sf3a1	99	80.230	Gadus_morhua
ENSPCOG00000026630	SF3A1	95	94.444	ENSGALG00000007937	SF3A1	100	92.569	Gallus_gallus
ENSPCOG00000026630	SF3A1	100	83.019	ENSGAFG00000009111	sf3a1	97	84.706	Gambusia_affinis
ENSPCOG00000026630	SF3A1	100	81.486	ENSGACG00000011893	sf3a1	97	83.377	Gasterosteus_aculeatus
ENSPCOG00000026630	SF3A1	96	91.064	ENSGAGG00000000762	SF3A1	99	91.196	Gopherus_agassizii
ENSPCOG00000026630	SF3A1	100	99.117	ENSGGOG00000012631	SF3A1	100	99.117	Gorilla_gorilla
ENSPCOG00000026630	SF3A1	100	84.105	ENSHBUG00000015795	sf3a1	99	85.275	Haplochromis_burtoni
ENSPCOG00000026630	SF3A1	100	98.991	ENSHGLG00000007907	SF3A1	100	98.991	Heterocephalus_glaber_female
ENSPCOG00000026630	SF3A1	100	98.991	ENSHGLG00100013799	SF3A1	100	98.991	Heterocephalus_glaber_male
ENSPCOG00000026630	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	99	80.645	Hippocampus_comes
ENSPCOG00000026630	SF3A1	96	82.682	ENSIPUG00000002470	sf3a1	98	82.943	Ictalurus_punctatus
ENSPCOG00000026630	SF3A1	100	99.117	ENSSTOG00000013892	SF3A1	100	99.117	Ictidomys_tridecemlineatus
ENSPCOG00000026630	SF3A1	100	98.866	ENSJJAG00000022566	Sf3a1	100	98.866	Jaculus_jaculus
ENSPCOG00000026630	SF3A1	100	82.516	ENSKMAG00000002400	sf3a1	98	84.505	Kryptolebias_marmoratus
ENSPCOG00000026630	SF3A1	100	80.905	ENSLBEG00000022974	sf3a1	99	83.119	Labrus_bergylta
ENSPCOG00000026630	SF3A1	100	87.186	ENSLACG00000003565	SF3A1	97	88.396	Latimeria_chalumnae
ENSPCOG00000026630	SF3A1	100	84.837	ENSLOCG00000008251	sf3a1	97	86.623	Lepisosteus_oculatus
ENSPCOG00000026630	SF3A1	100	99.117	ENSLAFG00000000448	SF3A1	100	99.117	Loxodonta_africana
ENSPCOG00000026630	SF3A1	98	61.783	ENSLAFG00000026032	-	98	61.783	Loxodonta_africana
ENSPCOG00000026630	SF3A1	100	99.243	ENSMFAG00000031979	SF3A1	100	99.243	Macaca_fascicularis
ENSPCOG00000026630	SF3A1	100	99.243	ENSMMUG00000005547	SF3A1	100	99.243	Macaca_mulatta
ENSPCOG00000026630	SF3A1	100	99.117	ENSMNEG00000037229	SF3A1	100	99.117	Macaca_nemestrina
ENSPCOG00000026630	SF3A1	100	99.369	ENSMLEG00000041908	SF3A1	100	99.369	Mandrillus_leucophaeus
ENSPCOG00000026630	SF3A1	97	85.252	ENSMAMG00000006460	sf3a1	97	85.640	Mastacembelus_armatus
ENSPCOG00000026630	SF3A1	100	84.105	ENSMZEG00005009633	sf3a1	99	85.275	Maylandia_zebra
ENSPCOG00000026630	SF3A1	95	94.444	ENSMGAG00000001330	SF3A1	99	93.540	Meleagris_gallopavo
ENSPCOG00000026630	SF3A1	92	94.945	ENSMAUG00000020317	Sf3a1	94	94.945	Mesocricetus_auratus
ENSPCOG00000026630	SF3A1	100	99.747	ENSMICG00000010038	SF3A1	100	99.747	Microcebus_murinus
ENSPCOG00000026630	SF3A1	100	98.613	ENSMOCG00000008438	Sf3a1	100	98.613	Microtus_ochrogaster
ENSPCOG00000026630	SF3A1	100	81.509	ENSMMOG00000015588	sf3a1	98	82.111	Mola_mola
ENSPCOG00000026630	SF3A1	100	97.856	ENSMODG00000009270	SF3A1	100	97.856	Monodelphis_domestica
ENSPCOG00000026630	SF3A1	100	84.257	ENSMALG00000000148	sf3a1	99	85.831	Monopterus_albus
ENSPCOG00000026630	SF3A1	100	98.108	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.108	Mus_caroli
ENSPCOG00000026630	SF3A1	100	98.108	ENSMUSG00000002129	Sf3a1	100	98.108	Mus_musculus
ENSPCOG00000026630	SF3A1	100	97.982	MGP_PahariEiJ_G0016862	Sf3a1	100	97.982	Mus_pahari
ENSPCOG00000026630	SF3A1	100	98.108	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.108	Mus_spretus
ENSPCOG00000026630	SF3A1	100	98.991	ENSMPUG00000013144	SF3A1	100	98.991	Mustela_putorius_furo
ENSPCOG00000026630	SF3A1	100	99.117	ENSMLUG00000002139	SF3A1	100	99.117	Myotis_lucifugus
ENSPCOG00000026630	SF3A1	100	98.865	ENSNGAG00000016977	Sf3a1	100	98.865	Nannospalax_galili
ENSPCOG00000026630	SF3A1	100	83.521	ENSNBRG00000016642	sf3a1	96	86.693	Neolamprologus_brichardi
ENSPCOG00000026630	SF3A1	100	99.369	ENSNLEG00000003686	SF3A1	100	99.369	Nomascus_leucogenys
ENSPCOG00000026630	SF3A1	96	88.026	ENSMEUG00000008741	SF3A1	100	88.026	Notamacropus_eugenii
ENSPCOG00000026630	SF3A1	100	98.361	ENSOPRG00000016636	SF3A1	100	98.361	Ochotona_princeps
ENSPCOG00000026630	SF3A1	100	98.865	ENSODEG00000002571	SF3A1	100	98.865	Octodon_degus
ENSPCOG00000026630	SF3A1	100	82.125	ENSONIG00000010848	sf3a1	99	84.655	Oreochromis_niloticus
ENSPCOG00000026630	SF3A1	100	98.739	ENSOCUG00000007633	SF3A1	100	98.739	Oryctolagus_cuniculus
ENSPCOG00000026630	SF3A1	96	81.627	ENSORLG00000013050	sf3a1	99	83.311	Oryzias_latipes
ENSPCOG00000026630	SF3A1	96	81.759	ENSORLG00020003236	sf3a1	94	83.445	Oryzias_latipes_hni
ENSPCOG00000026630	SF3A1	100	81.887	ENSORLG00015017411	sf3a1	99	83.613	Oryzias_latipes_hsok
ENSPCOG00000026630	SF3A1	100	82.264	ENSOMEG00000013362	sf3a1	99	83.355	Oryzias_melastigma
ENSPCOG00000026630	SF3A1	100	98.991	ENSOGAG00000012931	SF3A1	100	98.991	Otolemur_garnettii
ENSPCOG00000026630	SF3A1	100	97.352	ENSOARG00000006849	SF3A1	100	97.352	Ovis_aries
ENSPCOG00000026630	SF3A1	100	98.108	ENSPPAG00000041790	SF3A1	100	98.108	Pan_paniscus
ENSPCOG00000026630	SF3A1	100	98.991	ENSPPRG00000004391	SF3A1	100	98.991	Panthera_pardus
ENSPCOG00000026630	SF3A1	97	98.964	ENSPTIG00000000844	SF3A1	100	98.964	Panthera_tigris_altaica
ENSPCOG00000026630	SF3A1	100	99.117	ENSPTRG00000014240	SF3A1	100	99.117	Pan_troglodytes
ENSPCOG00000026630	SF3A1	100	99.369	ENSPANG00000020772	SF3A1	100	99.369	Papio_anubis
ENSPCOG00000026630	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSPCOG00000026630	SF3A1	96	84.162	ENSPMGG00000023096	sf3a1	100	84.162	Periophthalmus_magnuspinnatus
ENSPCOG00000026630	SF3A1	100	98.739	ENSPEMG00000009494	Sf3a1	100	98.739	Peromyscus_maniculatus_bairdii
ENSPCOG00000026630	SF3A1	69	78.000	ENSPMAG00000007139	-	90	77.903	Petromyzon_marinus
ENSPCOG00000026630	SF3A1	100	97.604	ENSPCIG00000022692	SF3A1	100	97.604	Phascolarctos_cinereus
ENSPCOG00000026630	SF3A1	100	75.126	ENSPFOG00000016768	sf3a1	93	78.776	Poecilia_formosa
ENSPCOG00000026630	SF3A1	100	83.417	ENSPLAG00000017268	sf3a1	97	84.967	Poecilia_latipinna
ENSPCOG00000026630	SF3A1	84	85.843	ENSPMEG00000019811	sf3a1	98	85.090	Poecilia_mexicana
ENSPCOG00000026630	SF3A1	100	83.543	ENSPREG00000010347	sf3a1	97	85.359	Poecilia_reticulata
ENSPCOG00000026630	SF3A1	100	99.369	ENSPPYG00000011707	SF3A1	100	99.369	Pongo_abelii
ENSPCOG00000026630	SF3A1	57	99.528	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSPCOG00000026630	SF3A1	100	94.704	ENSPVAG00000017719	SF3A1	94	98.121	Pteropus_vampyrus
ENSPCOG00000026630	SF3A1	100	84.105	ENSPNYG00000018706	sf3a1	99	85.275	Pundamilia_nyererei
ENSPCOG00000026630	SF3A1	97	84.596	ENSPNAG00000003721	sf3a1	99	84.467	Pygocentrus_nattereri
ENSPCOG00000026630	SF3A1	100	98.108	ENSRNOG00000005218	Sf3a1	100	98.108	Rattus_norvegicus
ENSPCOG00000026630	SF3A1	100	99.243	ENSRBIG00000032167	SF3A1	100	99.243	Rhinopithecus_bieti
ENSPCOG00000026630	SF3A1	100	99.243	ENSRROG00000044908	SF3A1	100	99.243	Rhinopithecus_roxellana
ENSPCOG00000026630	SF3A1	97	95.220	ENSSBOG00000021960	SF3A1	100	99.409	Saimiri_boliviensis_boliviensis
ENSPCOG00000026630	SF3A1	99	93.418	ENSSHAG00000003666	SF3A1	98	95.084	Sarcophilus_harrisii
ENSPCOG00000026630	SF3A1	100	83.125	ENSSFOG00015004579	sf3a1	99	84.872	Scleropages_formosus
ENSPCOG00000026630	SF3A1	100	80.755	ENSSMAG00000004275	sf3a1	97	82.876	Scophthalmus_maximus
ENSPCOG00000026630	SF3A1	100	83.774	ENSSDUG00000022219	sf3a1	99	84.527	Seriola_dumerili
ENSPCOG00000026630	SF3A1	100	83.774	ENSSLDG00000012642	sf3a1	99	84.527	Seriola_lalandi_dorsalis
ENSPCOG00000026630	SF3A1	97	95.855	ENSSARG00000005960	SF3A1	100	95.855	Sorex_araneus
ENSPCOG00000026630	SF3A1	96	91.969	ENSSPUG00000018863	SF3A1	100	91.542	Sphenodon_punctatus
ENSPCOG00000026630	SF3A1	100	83.522	ENSSPAG00000011856	sf3a1	99	84.655	Stegastes_partitus
ENSPCOG00000026630	SF3A1	100	99.117	ENSSSCG00000010002	SF3A1	100	99.117	Sus_scrofa
ENSPCOG00000026630	SF3A1	95	94.063	ENSTGUG00000010547	SF3A1	99	93.515	Taeniopygia_guttata
ENSPCOG00000026630	SF3A1	100	81.612	ENSTRUG00000006118	sf3a1	97	82.461	Takifugu_rubripes
ENSPCOG00000026630	SF3A1	64	81.784	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSPCOG00000026630	SF3A1	100	91.803	ENSTBEG00000012771	SF3A1	100	91.803	Tupaia_belangeri
ENSPCOG00000026630	SF3A1	100	98.866	ENSTTRG00000001535	SF3A1	100	98.866	Tursiops_truncatus
ENSPCOG00000026630	SF3A1	99	98.221	ENSUAMG00000006750	SF3A1	99	98.221	Ursus_americanus
ENSPCOG00000026630	SF3A1	99	98.214	ENSUMAG00000016665	SF3A1	99	98.214	Ursus_maritimus
ENSPCOG00000026630	SF3A1	100	98.991	ENSVVUG00000003075	SF3A1	100	98.991	Vulpes_vulpes
ENSPCOG00000026630	SF3A1	100	86.073	ENSXETG00000016144	sf3a1	100	85.571	Xenopus_tropicalis
ENSPCOG00000026630	SF3A1	100	82.767	ENSXCOG00000015653	sf3a1	97	84.444	Xiphophorus_couchianus
ENSPCOG00000026630	SF3A1	100	82.893	ENSXMAG00000002753	sf3a1	97	84.575	Xiphophorus_maculatus