EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000026791 (Gene tree)
Gene ID: 105826745
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 436282 bases
Position: chrKQ029394.1:3136985-3573266
Accession: 105826745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000028394	TUDOR	PF00567.24	5.1e-28	1	1
ENSPCOP00000028393	TUDOR	PF00567.24	5.2e-28	1	1
ENSPCOP00000028390	TUDOR	PF00567.24	5.4e-28	1	1
ENSPCOP00000028389	TUDOR	PF00567.24	5.4e-28	1	1
ENSPCOP00000028394	SNase	PF00565.17	4.6e-69	1	5
ENSPCOP00000028394	SNase	PF00565.17	4.6e-69	2	5
ENSPCOP00000028394	SNase	PF00565.17	4.6e-69	3	5
ENSPCOP00000028394	SNase	PF00565.17	4.6e-69	4	5
ENSPCOP00000028394	SNase	PF00565.17	4.6e-69	5	5
ENSPCOP00000028393	SNase	PF00565.17	4.9e-69	1	5
ENSPCOP00000028393	SNase	PF00565.17	4.9e-69	2	5
ENSPCOP00000028393	SNase	PF00565.17	4.9e-69	3	5
ENSPCOP00000028393	SNase	PF00565.17	4.9e-69	4	5
ENSPCOP00000028393	SNase	PF00565.17	4.9e-69	5	5
ENSPCOP00000028390	SNase	PF00565.17	5.5e-69	1	5
ENSPCOP00000028390	SNase	PF00565.17	5.5e-69	2	5
ENSPCOP00000028390	SNase	PF00565.17	5.5e-69	3	5
ENSPCOP00000028390	SNase	PF00565.17	5.5e-69	4	5
ENSPCOP00000028390	SNase	PF00565.17	5.5e-69	5	5
ENSPCOP00000028389	SNase	PF00565.17	5.5e-69	1	5
ENSPCOP00000028389	SNase	PF00565.17	5.5e-69	2	5
ENSPCOP00000028389	SNase	PF00565.17	5.5e-69	3	5
ENSPCOP00000028389	SNase	PF00565.17	5.5e-69	4	5
ENSPCOP00000028389	SNase	PF00565.17	5.5e-69	5	5
ENSPCOP00000028392	SNase	PF00565.17	1.5e-49	1	3
ENSPCOP00000028392	SNase	PF00565.17	1.5e-49	2	3
ENSPCOP00000028392	SNase	PF00565.17	1.5e-49	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000039295	SND1-205	2658	-	ENSPCOP00000028394	885 (aa)	-	A0A2K6GQA2
ENSPCOT00000039294	SND1-204	2676	-	ENSPCOP00000028393	891 (aa)	-	A0A2K6GQ79
ENSPCOT00000039291	SND1-202	2721	-	ENSPCOP00000028390	906 (aa)	-	A0A2K6GQ85
ENSPCOT00000039290	SND1-201	3569	XM_012664766	ENSPCOP00000028389	910 (aa)	XP_012520220	A0A2K6GQ97
ENSPCOT00000039293	SND1-203	1884	-	ENSPCOP00000028392	627 (aa)	-	A0A2K6GQ96

Gene Model

Click here to download ENSPCOG00000026791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000026791's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000026791	SND1	100	99.435	ENSG00000197157	SND1	100	99.341	Homo_sapiens
ENSPCOG00000026791	SND1	100	85.006	ENSAPOG00000017599	snd1	99	84.761	Acanthochromis_polyacanthus
ENSPCOG00000026791	SND1	100	98.647	ENSAMEG00000004664	SND1	94	98.575	Ailuropoda_melanoleuca
ENSPCOG00000026791	SND1	100	82.167	ENSACIG00000003551	snd1	99	82.071	Amphilophus_citrinellus
ENSPCOG00000026791	SND1	100	85.006	ENSAOCG00000014166	snd1	99	84.761	Amphiprion_ocellaris
ENSPCOG00000026791	SND1	100	85.006	ENSAPEG00000007067	snd1	99	84.761	Amphiprion_percula
ENSPCOG00000026791	SND1	98	84.253	ENSATEG00000018475	snd1	88	84.265	Anabas_testudineus
ENSPCOG00000026791	SND1	100	99.121	ENSANAG00000034463	SND1	100	99.121	Aotus_nancymaae
ENSPCOG00000026791	SND1	100	84.442	ENSACLG00000022897	snd1	99	84.187	Astatotilapia_calliptera
ENSPCOG00000026791	SND1	100	84.814	ENSAMXG00000016318	snd1	98	84.744	Astyanax_mexicanus
ENSPCOG00000026791	SND1	100	98.681	ENSBTAG00000010692	SND1	100	98.681	Bos_taurus
ENSPCOG00000026791	SND1	95	50.990	WBGene00006626	tsn-1	98	47.259	Caenorhabditis_elegans
ENSPCOG00000026791	SND1	100	98.901	ENSCJAG00000017668	SND1	100	98.901	Callithrix_jacchus
ENSPCOG00000026791	SND1	100	99.096	ENSCAFG00000001700	SND1	100	99.011	Canis_familiaris
ENSPCOG00000026791	SND1	100	99.096	ENSCAFG00020021639	SND1	100	99.011	Canis_lupus_dingo
ENSPCOG00000026791	SND1	100	99.011	ENSCHIG00000023390	SND1	100	99.011	Capra_hircus
ENSPCOG00000026791	SND1	93	98.621	ENSTSYG00000004979	SND1	98	98.621	Carlito_syrichta
ENSPCOG00000026791	SND1	99	85.214	ENSCAPG00000010677	SND1	98	85.118	Cavia_aperea
ENSPCOG00000026791	SND1	100	97.912	ENSCPOG00000006251	SND1	100	97.912	Cavia_porcellus
ENSPCOG00000026791	SND1	100	99.231	ENSCCAG00000036847	SND1	100	99.231	Cebus_capucinus
ENSPCOG00000026791	SND1	100	99.560	ENSCATG00000035214	SND1	100	99.560	Cercocebus_atys
ENSPCOG00000026791	SND1	100	98.079	ENSCLAG00000011796	SND1	100	98.022	Chinchilla_lanigera
ENSPCOG00000026791	SND1	100	99.560	ENSCSAG00000010182	SND1	100	99.560	Chlorocebus_sabaeus
ENSPCOG00000026791	SND1	80	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSPCOG00000026791	SND1	100	93.107	ENSCPBG00000018094	SND1	98	93.049	Chrysemys_picta_bellii
ENSPCOG00000026791	SND1	100	56.904	ENSCING00000000524	-	98	57.143	Ciona_intestinalis
ENSPCOG00000026791	SND1	100	58.249	ENSCSAVG00000008807	-	99	58.453	Ciona_savignyi
ENSPCOG00000026791	SND1	100	99.560	ENSCANG00000035119	SND1	100	99.560	Colobus_angolensis_palliatus
ENSPCOG00000026791	SND1	100	97.062	ENSCGRG00001022514	Snd1	100	97.033	Cricetulus_griseus_chok1gshd
ENSPCOG00000026791	SND1	99	97.059	ENSCGRG00000012277	Snd1	100	96.731	Cricetulus_griseus_crigri
ENSPCOG00000026791	SND1	100	84.780	ENSCSEG00000008661	snd1	98	84.787	Cynoglossus_semilaevis
ENSPCOG00000026791	SND1	100	85.569	ENSCVAG00000010316	snd1	100	84.023	Cyprinodon_variegatus
ENSPCOG00000026791	SND1	100	85.698	ENSDARG00000006766	snd1	97	87.410	Danio_rerio
ENSPCOG00000026791	SND1	100	95.941	ENSDNOG00000006795	SND1	100	95.941	Dasypus_novemcinctus
ENSPCOG00000026791	SND1	100	98.571	ENSDORG00000000336	Snd1	100	98.571	Dipodomys_ordii
ENSPCOG00000026791	SND1	99	50.714	FBgn0035121	Tudor-SN	99	49.893	Drosophila_melanogaster
ENSPCOG00000026791	SND1	92	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSPCOG00000026791	SND1	88	65.633	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSPCOG00000026791	SND1	100	97.408	ENSEASG00005008513	SND1	100	97.408	Equus_asinus_asinus
ENSPCOG00000026791	SND1	100	99.011	ENSECAG00000011451	SND1	100	99.011	Equus_caballus
ENSPCOG00000026791	SND1	93	96.147	ENSEEUG00000014737	SND1	100	86.703	Erinaceus_europaeus
ENSPCOG00000026791	SND1	99	83.427	ENSELUG00000001805	snd1	95	83.278	Esox_lucius
ENSPCOG00000026791	SND1	100	99.096	ENSFCAG00000008289	SND1	100	99.011	Felis_catus
ENSPCOG00000026791	SND1	100	98.305	ENSFDAG00000015881	SND1	100	98.242	Fukomys_damarensis
ENSPCOG00000026791	SND1	100	83.241	ENSFHEG00000004093	snd1	97	84.983	Fundulus_heteroclitus
ENSPCOG00000026791	SND1	64	75.141	ENSGMOG00000018932	snd1	64	75.141	Gadus_morhua
ENSPCOG00000026791	SND1	54	91.282	ENSGALG00000052684	-	50	93.048	Gallus_gallus
ENSPCOG00000026791	SND1	100	85.344	ENSGAFG00000008421	snd1	100	85.152	Gambusia_affinis
ENSPCOG00000026791	SND1	100	54.129	ENSGACG00000019793	snd1	98	54.314	Gasterosteus_aculeatus
ENSPCOG00000026791	SND1	100	99.560	ENSGGOG00000009614	SND1	100	99.560	Gorilla_gorilla
ENSPCOG00000026791	SND1	100	84.442	ENSHBUG00000019135	snd1	99	84.187	Haplochromis_burtoni
ENSPCOG00000026791	SND1	100	98.132	ENSHGLG00000003618	SND1	100	98.132	Heterocephalus_glaber_female
ENSPCOG00000026791	SND1	100	98.079	ENSHGLG00100012449	SND1	100	97.680	Heterocephalus_glaber_male
ENSPCOG00000026791	SND1	100	83.991	ENSHCOG00000005266	snd1	98	84.004	Hippocampus_comes
ENSPCOG00000026791	SND1	100	83.465	ENSIPUG00000013279	snd1	98	83.315	Ictalurus_punctatus
ENSPCOG00000026791	SND1	100	98.571	ENSSTOG00000002140	SND1	100	98.571	Ictidomys_tridecemlineatus
ENSPCOG00000026791	SND1	100	98.681	ENSJJAG00000009561	Snd1	100	98.681	Jaculus_jaculus
ENSPCOG00000026791	SND1	100	85.118	ENSKMAG00000016997	snd1	98	85.123	Kryptolebias_marmoratus
ENSPCOG00000026791	SND1	100	86.515	ENSLBEG00000013563	snd1	99	83.760	Labrus_bergylta
ENSPCOG00000026791	SND1	100	85.475	ENSLOCG00000015537	snd1	98	85.226	Lepisosteus_oculatus
ENSPCOG00000026791	SND1	100	98.418	ENSLAFG00000009696	SND1	100	98.242	Loxodonta_africana
ENSPCOG00000026791	SND1	100	99.560	ENSMFAG00000038114	SND1	100	99.560	Macaca_fascicularis
ENSPCOG00000026791	SND1	100	99.560	ENSMMUG00000015432	SND1	100	99.560	Macaca_mulatta
ENSPCOG00000026791	SND1	100	99.560	ENSMNEG00000039808	SND1	100	99.560	Macaca_nemestrina
ENSPCOG00000026791	SND1	100	99.451	ENSMLEG00000029040	SND1	100	99.451	Mandrillus_leucophaeus
ENSPCOG00000026791	SND1	100	84.667	ENSMAMG00000011739	snd1	98	84.598	Mastacembelus_armatus
ENSPCOG00000026791	SND1	100	84.442	ENSMZEG00005005681	snd1	99	84.187	Maylandia_zebra
ENSPCOG00000026791	SND1	100	99.560	ENSMICG00000000097	SND1	100	99.560	Microcebus_murinus
ENSPCOG00000026791	SND1	100	97.912	ENSMOCG00000005040	Snd1	100	97.912	Microtus_ochrogaster
ENSPCOG00000026791	SND1	100	84.555	ENSMMOG00000001795	snd1	99	84.316	Mola_mola
ENSPCOG00000026791	SND1	100	95.819	ENSMODG00000015182	SND1	99	95.652	Monodelphis_domestica
ENSPCOG00000026791	SND1	100	83.991	ENSMALG00000012071	snd1	98	83.929	Monopterus_albus
ENSPCOG00000026791	SND1	100	97.627	MGP_CAROLIEiJ_G0028159	Snd1	100	97.582	Mus_caroli
ENSPCOG00000026791	SND1	100	97.401	ENSMUSG00000001424	Snd1	100	97.363	Mus_musculus
ENSPCOG00000026791	SND1	100	97.627	MGP_PahariEiJ_G0021917	Snd1	100	98.145	Mus_pahari
ENSPCOG00000026791	SND1	100	97.627	MGP_SPRETEiJ_G0029159	Snd1	100	97.582	Mus_spretus
ENSPCOG00000026791	SND1	100	98.531	ENSMPUG00000006545	SND1	100	98.352	Mustela_putorius_furo
ENSPCOG00000026791	SND1	99	97.095	ENSMLUG00000017130	SND1	100	96.987	Myotis_lucifugus
ENSPCOG00000026791	SND1	100	97.912	ENSNGAG00000011186	Snd1	100	97.912	Nannospalax_galili
ENSPCOG00000026791	SND1	100	84.329	ENSNBRG00000006681	snd1	99	84.076	Neolamprologus_brichardi
ENSPCOG00000026791	SND1	100	99.548	ENSNLEG00000012263	SND1	100	99.548	Nomascus_leucogenys
ENSPCOG00000026791	SND1	92	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSPCOG00000026791	SND1	100	98.418	ENSODEG00000011502	SND1	100	98.242	Octodon_degus
ENSPCOG00000026791	SND1	100	84.329	ENSONIG00000011481	snd1	96	84.076	Oreochromis_niloticus
ENSPCOG00000026791	SND1	99	94.570	ENSOANG00000000817	SND1	99	93.645	Ornithorhynchus_anatinus
ENSPCOG00000026791	SND1	100	97.401	ENSOCUG00000001620	SND1	100	97.363	Oryctolagus_cuniculus
ENSPCOG00000026791	SND1	100	84.104	ENSORLG00000015201	snd1	98	84.022	Oryzias_latipes
ENSPCOG00000026791	SND1	100	84.216	ENSORLG00020013991	snd1	98	84.134	Oryzias_latipes_hni
ENSPCOG00000026791	SND1	100	84.216	ENSORLG00015012436	snd1	98	84.134	Oryzias_latipes_hsok
ENSPCOG00000026791	SND1	100	84.216	ENSOMEG00000006406	snd1	98	84.228	Oryzias_melastigma
ENSPCOG00000026791	SND1	100	99.232	ENSOGAG00000013356	SND1	94	99.232	Otolemur_garnettii
ENSPCOG00000026791	SND1	100	96.158	ENSOARG00000002149	SND1	100	96.158	Ovis_aries
ENSPCOG00000026791	SND1	100	99.451	ENSPPAG00000042947	SND1	100	99.451	Pan_paniscus
ENSPCOG00000026791	SND1	100	99.096	ENSPPRG00000004494	SND1	100	99.011	Panthera_pardus
ENSPCOG00000026791	SND1	100	98.983	ENSPTIG00000014214	SND1	100	98.901	Panthera_tigris_altaica
ENSPCOG00000026791	SND1	100	99.451	ENSPTRG00000023911	SND1	100	99.451	Pan_troglodytes
ENSPCOG00000026791	SND1	99	99.548	ENSPANG00000011997	SND1	99	99.548	Papio_anubis
ENSPCOG00000026791	SND1	100	81.767	ENSPKIG00000023494	snd1	98	81.798	Paramormyrops_kingsleyae
ENSPCOG00000026791	SND1	94	82.874	ENSPMGG00000003629	snd1	100	82.874	Periophthalmus_magnuspinnatus
ENSPCOG00000026791	SND1	100	97.802	ENSPEMG00000010240	Snd1	100	97.802	Peromyscus_maniculatus_bairdii
ENSPCOG00000026791	SND1	99	73.672	ENSPMAG00000007915	-	99	73.672	Petromyzon_marinus
ENSPCOG00000026791	SND1	100	96.271	ENSPCIG00000011561	SND1	100	96.154	Phascolarctos_cinereus
ENSPCOG00000026791	SND1	100	85.006	ENSPFOG00000001557	snd1	99	84.872	Poecilia_formosa
ENSPCOG00000026791	SND1	100	85.006	ENSPLAG00000018459	snd1	96	84.872	Poecilia_latipinna
ENSPCOG00000026791	SND1	100	85.457	ENSPMEG00000006803	snd1	99	85.317	Poecilia_mexicana
ENSPCOG00000026791	SND1	100	85.118	ENSPREG00000002189	snd1	99	84.983	Poecilia_reticulata
ENSPCOG00000026791	SND1	94	98.284	ENSPPYG00000017972	SND1	100	98.284	Pongo_abelii
ENSPCOG00000026791	SND1	100	86.703	ENSPCAG00000011305	SND1	99	86.622	Procavia_capensis
ENSPCOG00000026791	SND1	100	96.923	ENSPVAG00000013945	SND1	100	96.923	Pteropus_vampyrus
ENSPCOG00000026791	SND1	100	84.442	ENSPNYG00000000932	snd1	99	84.187	Pundamilia_nyererei
ENSPCOG00000026791	SND1	100	84.364	ENSPNAG00000001206	snd1	98	84.222	Pygocentrus_nattereri
ENSPCOG00000026791	SND1	100	97.401	ENSRNOG00000031173	Snd1	99	97.247	Rattus_norvegicus
ENSPCOG00000026791	SND1	95	97.645	ENSRBIG00000027782	-	93	99.620	Rhinopithecus_bieti
ENSPCOG00000026791	SND1	100	99.560	ENSRROG00000033020	SND1	100	99.560	Rhinopithecus_roxellana
ENSPCOG00000026791	SND1	100	99.121	ENSSBOG00000032461	SND1	100	99.121	Saimiri_boliviensis_boliviensis
ENSPCOG00000026791	SND1	99	93.100	ENSSHAG00000015359	SND1	100	92.793	Sarcophilus_harrisii
ENSPCOG00000026791	SND1	99	83.427	ENSSFOG00015001103	snd1	98	83.352	Scleropages_formosus
ENSPCOG00000026791	SND1	100	83.991	ENSSMAG00000001932	snd1	93	83.742	Scophthalmus_maximus
ENSPCOG00000026791	SND1	100	84.780	ENSSDUG00000002699	snd1	92	84.538	Seriola_dumerili
ENSPCOG00000026791	SND1	100	77.339	ENSSLDG00000001950	snd1	98	77.197	Seriola_lalandi_dorsalis
ENSPCOG00000026791	SND1	88	97.170	ENSSARG00000004877	SND1	92	97.170	Sorex_araneus
ENSPCOG00000026791	SND1	92	87.009	ENSSPUG00000017586	SND1	97	87.009	Sphenodon_punctatus
ENSPCOG00000026791	SND1	95	84.300	ENSSPAG00000021398	snd1	96	86.911	Stegastes_partitus
ENSPCOG00000026791	SND1	100	98.681	ENSSSCG00000016590	SND1	100	98.681	Sus_scrofa
ENSPCOG00000026791	SND1	100	84.766	ENSTRUG00000014067	snd1	98	83.781	Takifugu_rubripes
ENSPCOG00000026791	SND1	100	84.329	ENSTNIG00000011019	snd1	95	87.392	Tetraodon_nigroviridis
ENSPCOG00000026791	SND1	96	93.160	ENSTBEG00000003999	SND1	100	93.160	Tupaia_belangeri
ENSPCOG00000026791	SND1	100	94.286	ENSTTRG00000006059	SND1	100	94.286	Tursiops_truncatus
ENSPCOG00000026791	SND1	88	85.677	ENSUAMG00000002820	-	86	90.323	Ursus_americanus
ENSPCOG00000026791	SND1	93	98.669	ENSUAMG00000005604	-	93	98.669	Ursus_americanus
ENSPCOG00000026791	SND1	100	98.983	ENSUMAG00000005960	SND1	100	98.791	Ursus_maritimus
ENSPCOG00000026791	SND1	79	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSPCOG00000026791	SND1	100	98.870	ENSVVUG00000007226	SND1	100	98.791	Vulpes_vulpes
ENSPCOG00000026791	SND1	99	84.633	ENSXETG00000023043	snd1	100	85.335	Xenopus_tropicalis
ENSPCOG00000026791	SND1	92	84.948	ENSXCOG00000013629	snd1	99	81.591	Xiphophorus_couchianus
ENSPCOG00000026791	SND1	100	85.344	ENSXMAG00000011469	snd1	99	85.206	Xiphophorus_maculatus