EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000026845 (Gene tree)
Gene ID: 105809727
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 96091 bases
Position: chrKQ021513.1:8892518-8988608
Accession: 105809726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000028426	ResIII	PF04851.15	1.3e-12	1	1
ENSPCOP00000028424	ResIII	PF04851.15	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000039334	-	1125	XM_012643570	ENSPCOP00000028429	299 (aa)	XP_012499024	A0A2K6GQD7
ENSPCOT00000039329	-	3081	XM_012643567	ENSPCOP00000028424	911 (aa)	XP_012499021	A0A2K6GQD2
ENSPCOT00000039330	-	357	XM_012643569	ENSPCOP00000028425	118 (aa)	XP_012499023	A0A2K6GQB9
ENSPCOT00000039331	-	3094	XM_012643568	ENSPCOP00000028426	726 (aa)	XP_012499022	A0A2K6GQ95

Gene Model

Click here to download ENSPCOG00000026845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000026845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000026845	-	79	47.368	ENSPCOG00000015423	RAD54L	77	47.368
ENSPCOG00000026845	-	69	33.136	ENSPCOG00000020722	SMARCA1	62	33.136
ENSPCOG00000026845	-	74	31.533	ENSPCOG00000026714	ERCC6L2	80	31.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000026845	-	99	91.448	ENSG00000197275	RAD54B	99	90.440	Homo_sapiens
ENSPCOG00000026845	-	99	91.448	ENSG00000265817	FSBP	99	91.448	Homo_sapiens
ENSPCOG00000026845	-	99	89.931	ENSAMEG00000005834	-	99	87.816	Ailuropoda_melanoleuca
ENSPCOG00000026845	-	99	58.743	ENSACIG00000013005	rad54b	99	54.733	Amphilophus_citrinellus
ENSPCOG00000026845	-	99	58.752	ENSAOCG00000008523	rad54b	99	55.128	Amphiprion_ocellaris
ENSPCOG00000026845	-	99	58.299	ENSAPEG00000001673	rad54b	99	54.923	Amphiprion_percula
ENSPCOG00000026845	-	99	57.844	ENSATEG00000001527	rad54b	99	54.348	Anabas_testudineus
ENSPCOG00000026845	-	99	74.412	ENSAPLG00000014366	-	99	68.668	Anas_platyrhynchos
ENSPCOG00000026845	-	99	70.678	ENSACAG00000003671	-	99	70.839	Anolis_carolinensis
ENSPCOG00000026845	-	89	88.889	ENSANAG00000019528	-	99	88.889	Aotus_nancymaae
ENSPCOG00000026845	-	99	58.550	ENSACLG00000007826	rad54b	99	55.120	Astatotilapia_calliptera
ENSPCOG00000026845	-	99	57.438	ENSAMXG00000039985	rad54b	94	57.987	Astyanax_mexicanus
ENSPCOG00000026845	-	99	88.690	ENSBTAG00000000632	RAD54B	99	86.264	Bos_taurus
ENSPCOG00000026845	-	79	35.580	WBGene00013792	Y116A8C.13	85	35.433	Caenorhabditis_elegans
ENSPCOG00000026845	-	99	89.517	ENSCJAG00000000080	-	99	89.517	Callithrix_jacchus
ENSPCOG00000026845	-	99	88.414	ENSCAFG00000009179	RAD54B	99	85.620	Canis_familiaris
ENSPCOG00000026845	-	99	88.276	ENSCAFG00020012084	-	99	85.510	Canis_lupus_dingo
ENSPCOG00000026845	-	99	88.690	ENSCHIG00000008230	-	99	86.044	Capra_hircus
ENSPCOG00000026845	-	99	89.793	ENSTSYG00000013234	-	99	88.791	Carlito_syrichta
ENSPCOG00000026845	-	99	87.983	ENSCPOG00000011643	-	99	84.598	Cavia_porcellus
ENSPCOG00000026845	-	99	89.655	ENSCCAG00000011754	-	99	89.655	Cebus_capucinus
ENSPCOG00000026845	-	99	91.310	ENSCATG00000030661	-	99	91.310	Cercocebus_atys
ENSPCOG00000026845	-	99	89.227	ENSCLAG00000010476	-	99	86.139	Chinchilla_lanigera
ENSPCOG00000026845	-	99	91.172	ENSCSAG00000012712	-	99	90.110	Chlorocebus_sabaeus
ENSPCOG00000026845	-	99	76.309	ENSCPBG00000003204	-	99	71.395	Chrysemys_picta_bellii
ENSPCOG00000026845	-	99	91.172	ENSCANG00000017939	-	99	91.172	Colobus_angolensis_palliatus
ENSPCOG00000026845	-	99	83.884	ENSCGRG00001020184	Rad54b	99	80.132	Cricetulus_griseus_chok1gshd
ENSPCOG00000026845	-	99	82.507	ENSCGRG00000016752	Rad54b	99	78.878	Cricetulus_griseus_crigri
ENSPCOG00000026845	-	89	73.333	ENSCSEG00000001601	rad54b	96	73.333	Cynoglossus_semilaevis
ENSPCOG00000026845	-	99	59.973	ENSCVAG00000009200	rad54b	99	56.148	Cyprinodon_variegatus
ENSPCOG00000026845	-	99	57.708	ENSDARG00000092134	rad54b	99	59.908	Danio_rerio
ENSPCOG00000026845	-	100	86.831	ENSDNOG00000015535	-	100	84.245	Dasypus_novemcinctus
ENSPCOG00000026845	-	99	87.983	ENSDORG00000002492	Rad54b	99	84.286	Dipodomys_ordii
ENSPCOG00000026845	-	83	87.748	ENSETEG00000010605	-	100	82.763	Echinops_telfairi
ENSPCOG00000026845	-	100	50.744	ENSEBUG00000009104	rad54b	99	47.609	Eptatretus_burgeri
ENSPCOG00000026845	-	99	87.862	ENSEASG00005004021	-	99	87.203	Equus_asinus_asinus
ENSPCOG00000026845	-	99	88.276	ENSECAG00000021949	-	99	87.692	Equus_caballus
ENSPCOG00000026845	-	88	82.500	ENSEEUG00000008056	-	83	82.500	Erinaceus_europaeus
ENSPCOG00000026845	-	99	58.483	ENSELUG00000009287	rad54b	99	53.102	Esox_lucius
ENSPCOG00000026845	-	99	89.931	ENSFCAG00000015513	-	99	89.931	Felis_catus
ENSPCOG00000026845	-	99	73.582	ENSFALG00000005467	-	99	67.756	Ficedula_albicollis
ENSPCOG00000026845	-	98	88.701	ENSFDAG00000020541	-	100	86.909	Fukomys_damarensis
ENSPCOG00000026845	-	99	57.375	ENSFHEG00000014382	rad54b	90	57.005	Fundulus_heteroclitus
ENSPCOG00000026845	-	99	56.428	ENSGMOG00000014774	rad54b	98	57.268	Gadus_morhua
ENSPCOG00000026845	-	99	72.727	ENSGALG00000043597	RAD54B	99	67.503	Gallus_gallus
ENSPCOG00000026845	-	100	58.288	ENSGAFG00000007901	rad54b	99	54.940	Gambusia_affinis
ENSPCOG00000026845	-	99	59.066	ENSGACG00000009128	rad54b	99	55.169	Gasterosteus_aculeatus
ENSPCOG00000026845	-	99	76.138	ENSGAGG00000018747	-	99	70.742	Gopherus_agassizii
ENSPCOG00000026845	-	99	91.310	ENSGGOG00000023516	-	99	90.000	Gorilla_gorilla
ENSPCOG00000026845	-	99	58.197	ENSHBUG00000016017	rad54b	99	53.640	Haplochromis_burtoni
ENSPCOG00000026845	-	99	86.986	ENSHGLG00000008263	RAD54B	99	85.137	Heterocephalus_glaber_female
ENSPCOG00000026845	-	99	85.870	ENSHGLG00100008108	-	99	84.365	Heterocephalus_glaber_male
ENSPCOG00000026845	-	99	57.143	ENSHCOG00000004764	rad54b	98	56.104	Hippocampus_comes
ENSPCOG00000026845	-	99	57.572	ENSIPUG00000018531	rad54b	99	52.466	Ictalurus_punctatus
ENSPCOG00000026845	-	99	87.639	ENSSTOG00000010791	-	99	84.641	Ictidomys_tridecemlineatus
ENSPCOG00000026845	-	99	85.931	ENSJJAG00000010314	Rad54b	99	82.527	Jaculus_jaculus
ENSPCOG00000026845	-	99	57.026	ENSKMAG00000004744	rad54b	99	52.614	Kryptolebias_marmoratus
ENSPCOG00000026845	-	99	69.475	ENSLACG00000000859	-	100	69.733	Latimeria_chalumnae
ENSPCOG00000026845	-	99	64.237	ENSLOCG00000010100	rad54b	96	63.216	Lepisosteus_oculatus
ENSPCOG00000026845	-	99	88.138	ENSLAFG00000015315	-	99	85.750	Loxodonta_africana
ENSPCOG00000026845	-	99	91.034	ENSMFAG00000031629	-	99	91.034	Macaca_fascicularis
ENSPCOG00000026845	-	99	91.034	ENSMMUG00000005659	-	99	90.000	Macaca_mulatta
ENSPCOG00000026845	-	99	91.034	ENSMNEG00000016408	-	99	90.000	Macaca_nemestrina
ENSPCOG00000026845	-	99	91.448	ENSMLEG00000006946	-	99	90.220	Mandrillus_leucophaeus
ENSPCOG00000026845	-	99	57.973	ENSMAMG00000012269	rad54b	99	54.486	Mastacembelus_armatus
ENSPCOG00000026845	-	99	58.470	ENSMZEG00005005281	rad54b	95	59.245	Maylandia_zebra
ENSPCOG00000026845	-	99	73.306	ENSMGAG00000012024	-	99	67.795	Meleagris_gallopavo
ENSPCOG00000026845	-	99	83.471	ENSMAUG00000013586	Rad54b	99	79.473	Mesocricetus_auratus
ENSPCOG00000026845	-	100	96.281	ENSMICG00000000754	-	100	90.560	Microcebus_murinus
ENSPCOG00000026845	-	99	81.818	ENSMOCG00000020035	Rad54b	99	78.375	Microtus_ochrogaster
ENSPCOG00000026845	-	99	57.279	ENSMMOG00000003394	rad54b	99	53.913	Mola_mola
ENSPCOG00000026845	-	100	78.650	ENSMODG00000007343	-	99	76.799	Monodelphis_domestica
ENSPCOG00000026845	-	89	58.951	ENSMALG00000001520	rad54b	99	59.042	Monopterus_albus
ENSPCOG00000026845	-	99	83.884	MGP_CAROLIEiJ_G0025810	Rad54b	99	79.693	Mus_caroli
ENSPCOG00000026845	-	99	83.724	ENSMUSG00000078773	Rad54b	99	79.341	Mus_musculus
ENSPCOG00000026845	-	99	84.552	MGP_PahariEiJ_G0023933	Rad54b	99	80.000	Mus_pahari
ENSPCOG00000026845	-	99	84.690	MGP_SPRETEiJ_G0026758	Rad54b	99	80.110	Mus_spretus
ENSPCOG00000026845	-	99	87.724	ENSMPUG00000008878	-	99	87.268	Mustela_putorius_furo
ENSPCOG00000026845	-	99	88.690	ENSMLUG00000008953	-	99	84.413	Myotis_lucifugus
ENSPCOG00000026845	-	99	87.517	ENSNGAG00000017537	Rad54b	99	83.917	Nannospalax_galili
ENSPCOG00000026845	-	99	58.356	ENSNBRG00000013394	rad54b	99	54.853	Neolamprologus_brichardi
ENSPCOG00000026845	-	99	91.448	ENSNLEG00000003062	-	99	91.448	Nomascus_leucogenys
ENSPCOG00000026845	-	78	78.882	ENSMEUG00000012426	-	82	73.770	Notamacropus_eugenii
ENSPCOG00000026845	-	99	87.017	ENSODEG00000019564	-	99	84.708	Octodon_degus
ENSPCOG00000026845	-	93	88.053	ENSODEG00000002650	-	95	86.883	Octodon_degus
ENSPCOG00000026845	-	99	58.413	ENSONIG00000006067	rad54b	99	54.968	Oreochromis_niloticus
ENSPCOG00000026845	-	99	76.446	ENSOANG00000011348	-	99	76.330	Ornithorhynchus_anatinus
ENSPCOG00000026845	-	99	89.379	ENSOCUG00000016478	-	99	85.604	Oryctolagus_cuniculus
ENSPCOG00000026845	-	99	59.401	ENSORLG00000008918	rad54b	99	61.360	Oryzias_latipes
ENSPCOG00000026845	-	89	61.515	ENSORLG00020012171	rad54b	99	61.515	Oryzias_latipes_hni
ENSPCOG00000026845	-	99	59.239	ENSORLG00015018536	rad54b	99	54.757	Oryzias_latipes_hsok
ENSPCOG00000026845	-	99	59.239	ENSOMEG00000004345	rad54b	99	59.615	Oryzias_melastigma
ENSPCOG00000026845	-	100	91.736	ENSOGAG00000007854	-	100	90.011	Otolemur_garnettii
ENSPCOG00000026845	-	99	88.276	ENSOARG00000007691	-	99	87.916	Ovis_aries
ENSPCOG00000026845	-	99	89.655	ENSPPAG00000029572	-	99	88.791	Pan_paniscus
ENSPCOG00000026845	-	99	90.069	ENSPPRG00000007571	-	99	90.069	Panthera_pardus
ENSPCOG00000026845	-	99	90.207	ENSPTIG00000012670	-	99	90.207	Panthera_tigris_altaica
ENSPCOG00000026845	-	99	91.448	ENSPTRG00000020427	-	99	91.448	Pan_troglodytes
ENSPCOG00000026845	-	99	91.448	ENSPANG00000019566	-	99	90.330	Papio_anubis
ENSPCOG00000026845	-	99	63.812	ENSPKIG00000014974	rad54b	99	58.658	Paramormyrops_kingsleyae
ENSPCOG00000026845	-	99	73.829	ENSPSIG00000002383	-	98	73.599	Pelodiscus_sinensis
ENSPCOG00000026845	-	99	83.196	ENSPEMG00000012133	Rad54b	99	80.022	Peromyscus_maniculatus_bairdii
ENSPCOG00000026845	-	99	57.645	ENSPMAG00000002916	rad54b	99	58.603	Petromyzon_marinus
ENSPCOG00000026845	-	99	79.834	ENSPCIG00000020151	-	94	77.736	Phascolarctos_cinereus
ENSPCOG00000026845	-	99	59.647	ENSPFOG00000023411	rad54b	99	54.910	Poecilia_formosa
ENSPCOG00000026845	-	99	59.918	ENSPLAG00000010430	rad54b	99	55.121	Poecilia_latipinna
ENSPCOG00000026845	-	99	60.165	ENSPMEG00000016873	rad54b	99	55.272	Poecilia_mexicana
ENSPCOG00000026845	-	100	58.895	ENSPREG00000018443	rad54b	99	55.124	Poecilia_reticulata
ENSPCOG00000026845	-	99	91.034	ENSPPYG00000018750	-	99	90.110	Pongo_abelii
ENSPCOG00000026845	-	99	88.828	ENSPVAG00000000261	-	92	88.799	Pteropus_vampyrus
ENSPCOG00000026845	-	99	58.702	ENSPNYG00000018303	rad54b	95	59.542	Pundamilia_nyererei
ENSPCOG00000026845	-	99	58.038	ENSPNAG00000000295	rad54b	99	54.077	Pygocentrus_nattereri
ENSPCOG00000026845	-	99	81.956	ENSRNOG00000039949	Rad54b	99	76.948	Rattus_norvegicus
ENSPCOG00000026845	-	99	90.483	ENSRBIG00000020419	-	99	89.560	Rhinopithecus_bieti
ENSPCOG00000026845	-	99	90.483	ENSRROG00000039897	-	99	89.560	Rhinopithecus_roxellana
ENSPCOG00000026845	-	83	41.970	YBR073W	RDH54	82	37.394	Saccharomyces_cerevisiae
ENSPCOG00000026845	-	99	89.241	ENSSBOG00000028501	-	99	88.571	Saimiri_boliviensis_boliviensis
ENSPCOG00000026845	-	99	80.636	ENSSHAG00000017038	-	99	74.643	Sarcophilus_harrisii
ENSPCOG00000026845	-	82	64.430	ENSSFOG00015008483	rad54b	92	64.430	Scleropages_formosus
ENSPCOG00000026845	-	99	57.418	ENSSMAG00000018659	rad54b	99	53.779	Scophthalmus_maximus
ENSPCOG00000026845	-	98	58.678	ENSSDUG00000001122	rad54b	98	53.919	Seriola_dumerili
ENSPCOG00000026845	-	99	58.767	ENSSLDG00000013787	rad54b	99	54.008	Seriola_lalandi_dorsalis
ENSPCOG00000026845	-	99	73.829	ENSSPUG00000016497	-	99	67.908	Sphenodon_punctatus
ENSPCOG00000026845	-	99	58.583	ENSSPAG00000012800	rad54b	99	55.713	Stegastes_partitus
ENSPCOG00000026845	-	99	87.448	ENSSSCG00000006101	-	99	87.860	Sus_scrofa
ENSPCOG00000026845	-	99	72.966	ENSTGUG00000011880	-	99	67.570	Taeniopygia_guttata
ENSPCOG00000026845	-	99	58.687	ENSTRUG00000010015	rad54b	99	53.545	Takifugu_rubripes
ENSPCOG00000026845	-	99	83.840	ENSTTRG00000006312	-	99	83.516	Tursiops_truncatus
ENSPCOG00000026845	-	99	89.655	ENSUMAG00000016401	-	99	87.486	Ursus_maritimus
ENSPCOG00000026845	-	99	87.862	ENSVPAG00000003157	-	99	84.505	Vicugna_pacos
ENSPCOG00000026845	-	99	58.299	ENSXETG00000025924	rad54b	99	59.601	Xenopus_tropicalis
ENSPCOG00000026845	-	100	58.288	ENSXMAG00000013141	rad54b	99	54.940	Xiphophorus_maculatus