EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000026934 (Gene tree)
Gene ID: 105812105
Gene Symbol: PCBP1
Alias: HNRPE1|HNRPX|hnRNP-E1|hnRNP-X
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 1071 bases
Position: chrKQ021992.1:3146285-3147355
Accession: 105812105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000028562	KH_1	PF00013.29	1.7e-51	1	3
ENSPCOP00000028562	KH_1	PF00013.29	1.7e-51	2	3
ENSPCOP00000028562	KH_1	PF00013.29	1.7e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000039484	PCBP1-201	1071	XM_012646491	ENSPCOP00000028562	356 (aa)	XP_012501945	A0A2K6GQR0

Gene Model

Click here to download ENSPCOG00000026934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000026934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000026934	PCBP1	61	30.994	ENSPCOG00000022783	FUBP3	75	31.138
ENSPCOG00000026934	PCBP1	100	82.834	ENSPCOG00000025737	PCBP2	100	82.834
ENSPCOG00000026934	PCBP1	64	34.667	ENSPCOG00000027506	KHSRP	62	34.667
ENSPCOG00000026934	PCBP1	66	41.558	ENSPCOG00000022693	NOVA2	53	41.558
ENSPCOG00000026934	PCBP1	56	32.143	ENSPCOG00000027031	IGF2BP2	78	33.696
ENSPCOG00000026934	PCBP1	98	53.541	ENSPCOG00000027535	PCBP4	77	53.541
ENSPCOG00000026934	PCBP1	99	66.027	ENSPCOG00000013797	PCBP3	100	64.225
ENSPCOG00000026934	PCBP1	70	40.541	ENSPCOG00000016857	NOVA1	51	40.541
ENSPCOG00000026934	PCBP1	53	32.353	ENSPCOG00000006475	IGF2BP1	59	32.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000026934	PCBP1	100	100.000	ENSG00000169564	PCBP1	100	100.000	Homo_sapiens
ENSPCOG00000026934	PCBP1	100	97.191	ENSAMEG00000016094	PCBP1	100	97.191	Ailuropoda_melanoleuca
ENSPCOG00000026934	PCBP1	100	85.674	ENSANAG00000033377	-	100	85.674	Aotus_nancymaae
ENSPCOG00000026934	PCBP1	97	96.243	ENSANAG00000026989	-	99	96.243	Aotus_nancymaae
ENSPCOG00000026934	PCBP1	79	95.053	ENSANAG00000031745	-	100	95.053	Aotus_nancymaae
ENSPCOG00000026934	PCBP1	79	91.873	ENSANAG00000022494	-	100	91.873	Aotus_nancymaae
ENSPCOG00000026934	PCBP1	100	88.202	ENSANAG00000026077	-	100	88.202	Aotus_nancymaae
ENSPCOG00000026934	PCBP1	100	89.045	ENSANAG00000023938	-	100	89.045	Aotus_nancymaae
ENSPCOG00000026934	PCBP1	89	87.658	ENSANAG00000027108	-	100	87.658	Aotus_nancymaae
ENSPCOG00000026934	PCBP1	79	95.053	ENSANAG00000019364	-	100	95.053	Aotus_nancymaae
ENSPCOG00000026934	PCBP1	91	100.000	ENSBTAG00000008985	PCBP1	99	100.000	Bos_taurus
ENSPCOG00000026934	PCBP1	100	94.382	ENSCJAG00000038388	-	95	94.382	Callithrix_jacchus
ENSPCOG00000026934	PCBP1	100	99.719	ENSCAFG00000003326	PCBP1	100	99.719	Canis_familiaris
ENSPCOG00000026934	PCBP1	100	100.000	ENSCHIG00000007923	PCBP1	100	100.000	Capra_hircus
ENSPCOG00000026934	PCBP1	100	99.438	ENSTSYG00000027848	PCBP1	100	99.438	Carlito_syrichta
ENSPCOG00000026934	PCBP1	100	100.000	ENSCPOG00000013511	PCBP1	100	100.000	Cavia_porcellus
ENSPCOG00000026934	PCBP1	100	91.292	ENSCCAG00000029186	-	98	91.292	Cebus_capucinus
ENSPCOG00000026934	PCBP1	100	100.000	ENSCCAG00000019842	-	100	100.000	Cebus_capucinus
ENSPCOG00000026934	PCBP1	100	100.000	ENSCATG00000015029	PCBP1	100	100.000	Cercocebus_atys
ENSPCOG00000026934	PCBP1	100	99.438	ENSCLAG00000017909	PCBP1	100	99.438	Chinchilla_lanigera
ENSPCOG00000026934	PCBP1	100	100.000	ENSCSAG00000019441	PCBP1	100	100.000	Chlorocebus_sabaeus
ENSPCOG00000026934	PCBP1	72	84.706	ENSCANG00000033810	-	87	84.706	Colobus_angolensis_palliatus
ENSPCOG00000026934	PCBP1	100	100.000	ENSCANG00000018039	-	100	100.000	Colobus_angolensis_palliatus
ENSPCOG00000026934	PCBP1	100	89.888	ENSCANG00000032470	-	94	89.888	Colobus_angolensis_palliatus
ENSPCOG00000026934	PCBP1	100	100.000	ENSCGRG00001015078	Pcbp1	100	100.000	Cricetulus_griseus_chok1gshd
ENSPCOG00000026934	PCBP1	100	100.000	ENSCGRG00000018899	Pcbp1	100	100.000	Cricetulus_griseus_crigri
ENSPCOG00000026934	PCBP1	80	99.298	ENSDNOG00000036372	PCBP1	99	99.298	Dasypus_novemcinctus
ENSPCOG00000026934	PCBP1	100	100.000	ENSDORG00000008216	Pcbp1	100	100.000	Dipodomys_ordii
ENSPCOG00000026934	PCBP1	100	100.000	ENSFCAG00000022238	PCBP1	100	100.000	Felis_catus
ENSPCOG00000026934	PCBP1	100	99.719	ENSFDAG00000019637	PCBP1	100	99.719	Fukomys_damarensis
ENSPCOG00000026934	PCBP1	100	100.000	ENSGGOG00000028130	PCBP1	100	100.000	Gorilla_gorilla
ENSPCOG00000026934	PCBP1	100	99.719	ENSHGLG00000020345	Pcbp1	100	99.719	Heterocephalus_glaber_female
ENSPCOG00000026934	PCBP1	100	97.753	ENSHGLG00000020243	-	100	97.753	Heterocephalus_glaber_female
ENSPCOG00000026934	PCBP1	100	99.438	ENSHGLG00100019620	-	100	99.438	Heterocephalus_glaber_male
ENSPCOG00000026934	PCBP1	100	99.719	ENSHGLG00100019761	Pcbp1	100	99.719	Heterocephalus_glaber_male
ENSPCOG00000026934	PCBP1	100	100.000	ENSSTOG00000026002	PCBP1	100	100.000	Ictidomys_tridecemlineatus
ENSPCOG00000026934	PCBP1	100	100.000	ENSJJAG00000000737	Pcbp1	100	100.000	Jaculus_jaculus
ENSPCOG00000026934	PCBP1	95	88.427	ENSMFAG00000003400	PCBP1	100	88.427	Macaca_fascicularis
ENSPCOG00000026934	PCBP1	100	100.000	ENSMMUG00000038295	PCBP1	100	100.000	Macaca_mulatta
ENSPCOG00000026934	PCBP1	100	100.000	ENSMNEG00000002934	PCBP1	100	100.000	Macaca_nemestrina
ENSPCOG00000026934	PCBP1	100	100.000	ENSMLEG00000027389	PCBP1	100	100.000	Mandrillus_leucophaeus
ENSPCOG00000026934	PCBP1	100	99.719	ENSMAUG00000009843	Pcbp1	100	99.719	Mesocricetus_auratus
ENSPCOG00000026934	PCBP1	100	100.000	ENSMICG00000038221	PCBP1	100	100.000	Microcebus_murinus
ENSPCOG00000026934	PCBP1	100	100.000	ENSMOCG00000008102	Pcbp1	100	100.000	Microtus_ochrogaster
ENSPCOG00000026934	PCBP1	100	100.000	MGP_CAROLIEiJ_G0028598	Pcbp1	100	100.000	Mus_caroli
ENSPCOG00000026934	PCBP1	100	100.000	ENSMUSG00000051695	Pcbp1	100	100.000	Mus_musculus
ENSPCOG00000026934	PCBP1	100	100.000	MGP_PahariEiJ_G0022335	Pcbp1	100	100.000	Mus_pahari
ENSPCOG00000026934	PCBP1	100	100.000	MGP_SPRETEiJ_G0029609	Pcbp1	100	100.000	Mus_spretus
ENSPCOG00000026934	PCBP1	100	97.191	ENSMPUG00000007175	PCBP1	100	97.191	Mustela_putorius_furo
ENSPCOG00000026934	PCBP1	100	100.000	ENSMLUG00000014173	PCBP1	100	100.000	Myotis_lucifugus
ENSPCOG00000026934	PCBP1	100	100.000	ENSNGAG00000011957	-	100	100.000	Nannospalax_galili
ENSPCOG00000026934	PCBP1	100	100.000	ENSNGAG00000014909	-	100	100.000	Nannospalax_galili
ENSPCOG00000026934	PCBP1	100	100.000	ENSNLEG00000018722	PCBP1	100	100.000	Nomascus_leucogenys
ENSPCOG00000026934	PCBP1	100	83.427	ENSODEG00000000263	PCBP1	100	83.427	Octodon_degus
ENSPCOG00000026934	PCBP1	100	100.000	ENSOCUG00000003634	PCBP1	100	100.000	Oryctolagus_cuniculus
ENSPCOG00000026934	PCBP1	100	97.191	ENSOGAG00000028946	PCBP1	100	97.191	Otolemur_garnettii
ENSPCOG00000026934	PCBP1	100	100.000	ENSOARG00000019516	PCBP1	100	100.000	Ovis_aries
ENSPCOG00000026934	PCBP1	100	98.034	ENSPPAG00000036116	PCBP1	99	98.599	Pan_paniscus
ENSPCOG00000026934	PCBP1	100	100.000	ENSPPRG00000020533	PCBP1	100	100.000	Panthera_pardus
ENSPCOG00000026934	PCBP1	100	100.000	ENSPTIG00000007318	PCBP1	100	100.000	Panthera_tigris_altaica
ENSPCOG00000026934	PCBP1	100	100.000	ENSPTRG00000012025	PCBP1	100	100.000	Pan_troglodytes
ENSPCOG00000026934	PCBP1	100	100.000	ENSPANG00000011314	PCBP1	100	100.000	Papio_anubis
ENSPCOG00000026934	PCBP1	100	100.000	ENSPPYG00000012328	PCBP1	100	100.000	Pongo_abelii
ENSPCOG00000026934	PCBP1	100	99.157	ENSRROG00000009684	-	95	99.157	Rhinopithecus_roxellana
ENSPCOG00000026934	PCBP1	93	98.795	ENSRROG00000012514	-	100	98.795	Rhinopithecus_roxellana
ENSPCOG00000026934	PCBP1	100	83.427	ENSSBOG00000035309	-	94	83.427	Saimiri_boliviensis_boliviensis
ENSPCOG00000026934	PCBP1	100	99.719	ENSSSCG00000027224	PCBP1	100	99.719	Sus_scrofa
ENSPCOG00000026934	PCBP1	51	100.000	ENSTBEG00000015706	-	51	100.000	Tupaia_belangeri
ENSPCOG00000026934	PCBP1	91	99.690	ENSVVUG00000028033	PCBP1	99	99.690	Vulpes_vulpes