EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000026987 (Gene tree)
Gene ID: 105810294
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 74848 bases
Position: chrKQ021603.1:1547074-1621921
Accession: 105810294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000028640	RNA_pol_Rpb1_5	PF04998.17	6.1e-104	1	1
ENSPCOP00000028640	RNA_pol_Rpb1_4	PF05000.17	1.9e-25	1	1
ENSPCOP00000028640	RNA_pol_Rpb1_2	PF00623.20	1.2e-69	1	1
ENSPCOP00000028640	RNA_pol_Rpb1_3	PF04983.18	2.9e-37	1	1
ENSPCOP00000028640	RNA_pol_Rpb1_1	PF04997.12	3.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000039572	POLR1A-201	6258	XM_012644253	ENSPCOP00000028640	1721 (aa)	XP_012499707	A0A2K6GQY6

Gene Model

Click here to download ENSPCOG00000026987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000026987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000026987	POLR1A	85	30.769	ENSPCOG00000025260	-	70	30.769
ENSPCOG00000026987	POLR1A	65	34.746	ENSPCOG00000028311	POLR3A	67	34.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000026987	POLR1A	97	95.897	ENSG00000068654	POLR1A	100	92.214	Homo_sapiens
ENSPCOG00000026987	POLR1A	69	68.013	ENSAPOG00000017945	polr1a	99	68.013	Acanthochromis_polyacanthus
ENSPCOG00000026987	POLR1A	100	90.587	ENSAMEG00000005807	POLR1A	100	91.906	Ailuropoda_melanoleuca
ENSPCOG00000026987	POLR1A	100	63.021	ENSACIG00000022147	polr1a	100	62.011	Amphilophus_citrinellus
ENSPCOG00000026987	POLR1A	100	65.767	ENSAOCG00000017336	polr1a	100	68.017	Amphiprion_ocellaris
ENSPCOG00000026987	POLR1A	100	65.709	ENSAPEG00000016105	polr1a	100	65.861	Amphiprion_percula
ENSPCOG00000026987	POLR1A	100	65.975	ENSATEG00000016773	polr1a	100	66.320	Anabas_testudineus
ENSPCOG00000026987	POLR1A	86	72.402	ENSAPLG00000013871	POLR1A	99	72.200	Anas_platyrhynchos
ENSPCOG00000026987	POLR1A	99	69.533	ENSACAG00000012141	POLR1A	99	68.527	Anolis_carolinensis
ENSPCOG00000026987	POLR1A	100	90.877	ENSANAG00000033927	POLR1A	100	90.994	Aotus_nancymaae
ENSPCOG00000026987	POLR1A	100	62.167	ENSACLG00000020541	polr1a	100	62.009	Astatotilapia_calliptera
ENSPCOG00000026987	POLR1A	100	90.180	ENSBTAG00000006481	POLR1A	100	90.413	Bos_taurus
ENSPCOG00000026987	POLR1A	99	38.260	WBGene00012999	rpoa-1	98	37.821	Caenorhabditis_elegans
ENSPCOG00000026987	POLR1A	100	90.645	ENSCJAG00000019547	POLR1A	100	90.877	Callithrix_jacchus
ENSPCOG00000026987	POLR1A	100	90.994	ENSCAFG00000007613	POLR1A	100	90.994	Canis_familiaris
ENSPCOG00000026987	POLR1A	100	90.788	ENSCAFG00020014752	POLR1A	100	90.788	Canis_lupus_dingo
ENSPCOG00000026987	POLR1A	100	88.072	ENSCHIG00000018204	POLR1A	99	89.385	Capra_hircus
ENSPCOG00000026987	POLR1A	100	89.367	ENSTSYG00000002761	POLR1A	100	89.309	Carlito_syrichta
ENSPCOG00000026987	POLR1A	97	84.863	ENSCAPG00000010132	POLR1A	100	84.537	Cavia_aperea
ENSPCOG00000026987	POLR1A	100	89.437	ENSCPOG00000012350	POLR1A	100	89.263	Cavia_porcellus
ENSPCOG00000026987	POLR1A	100	91.226	ENSCCAG00000019839	POLR1A	100	91.458	Cebus_capucinus
ENSPCOG00000026987	POLR1A	100	92.330	ENSCATG00000029786	POLR1A	100	92.446	Cercocebus_atys
ENSPCOG00000026987	POLR1A	100	89.571	ENSCLAG00000005187	POLR1A	100	89.513	Chinchilla_lanigera
ENSPCOG00000026987	POLR1A	100	92.098	ENSCSAG00000016251	POLR1A	100	92.330	Chlorocebus_sabaeus
ENSPCOG00000026987	POLR1A	99	74.797	ENSCPBG00000001115	POLR1A	99	74.550	Chrysemys_picta_bellii
ENSPCOG00000026987	POLR1A	99	46.841	ENSCSAVG00000007184	-	91	55.143	Ciona_savignyi
ENSPCOG00000026987	POLR1A	100	89.199	ENSCANG00000031785	POLR1A	100	89.431	Colobus_angolensis_palliatus
ENSPCOG00000026987	POLR1A	96	89.666	ENSCGRG00001006651	Polr1a	100	83.507	Cricetulus_griseus_chok1gshd
ENSPCOG00000026987	POLR1A	60	87.536	ENSCGRG00000010834	Polr1a	100	87.343	Cricetulus_griseus_crigri
ENSPCOG00000026987	POLR1A	100	61.863	ENSCSEG00000020190	polr1a	100	61.739	Cynoglossus_semilaevis
ENSPCOG00000026987	POLR1A	100	64.600	ENSCVAG00000020941	polr1a	100	64.542	Cyprinodon_variegatus
ENSPCOG00000026987	POLR1A	100	67.961	ENSDARG00000098375	polr1a	100	67.787	Danio_rerio
ENSPCOG00000026987	POLR1A	100	83.092	ENSDNOG00000010829	POLR1A	100	82.908	Dasypus_novemcinctus
ENSPCOG00000026987	POLR1A	100	88.388	ENSDORG00000008298	Polr1a	100	88.388	Dipodomys_ordii
ENSPCOG00000026987	POLR1A	79	44.534	FBgn0019938	RpI1	99	43.080	Drosophila_melanogaster
ENSPCOG00000026987	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSPCOG00000026987	POLR1A	88	65.116	ENSEBUG00000005667	-	99	65.116	Eptatretus_burgeri
ENSPCOG00000026987	POLR1A	100	92.446	ENSEASG00005001625	POLR1A	100	92.446	Equus_asinus_asinus
ENSPCOG00000026987	POLR1A	100	92.446	ENSECAG00000030510	-	100	93.971	Equus_caballus
ENSPCOG00000026987	POLR1A	100	92.446	ENSECAG00000010092	POLR1A	100	93.971	Equus_caballus
ENSPCOG00000026987	POLR1A	100	92.446	ENSECAG00000036306	-	100	93.971	Equus_caballus
ENSPCOG00000026987	POLR1A	85	95.745	ENSEEUG00000000676	POLR1A	85	95.556	Erinaceus_europaeus
ENSPCOG00000026987	POLR1A	100	67.903	ENSELUG00000012769	polr1a	99	66.609	Esox_lucius
ENSPCOG00000026987	POLR1A	100	91.691	ENSFCAG00000008966	POLR1A	100	91.749	Felis_catus
ENSPCOG00000026987	POLR1A	99	71.261	ENSFALG00000010082	POLR1A	99	70.911	Ficedula_albicollis
ENSPCOG00000026987	POLR1A	100	89.263	ENSFDAG00000013726	POLR1A	100	89.089	Fukomys_damarensis
ENSPCOG00000026987	POLR1A	100	61.685	ENSFHEG00000005996	polr1a	100	61.592	Fundulus_heteroclitus
ENSPCOG00000026987	POLR1A	100	60.453	ENSGMOG00000002230	polr1a	100	59.896	Gadus_morhua
ENSPCOG00000026987	POLR1A	91	69.654	ENSGALG00000038160	-	99	69.590	Gallus_gallus
ENSPCOG00000026987	POLR1A	100	64.331	ENSGAFG00000015266	polr1a	100	63.777	Gambusia_affinis
ENSPCOG00000026987	POLR1A	100	64.801	ENSGACG00000018791	polr1a	100	64.413	Gasterosteus_aculeatus
ENSPCOG00000026987	POLR1A	89	75.423	ENSGAGG00000004984	-	96	80.657	Gopherus_agassizii
ENSPCOG00000026987	POLR1A	100	92.040	ENSGGOG00000001788	POLR1A	100	92.272	Gorilla_gorilla
ENSPCOG00000026987	POLR1A	90	64.593	ENSHBUG00000020021	polr1a	98	64.416	Haplochromis_burtoni
ENSPCOG00000026987	POLR1A	100	89.089	ENSHGLG00000006334	POLR1A	100	89.031	Heterocephalus_glaber_female
ENSPCOG00000026987	POLR1A	100	88.831	ENSHGLG00100006614	POLR1A	100	88.773	Heterocephalus_glaber_male
ENSPCOG00000026987	POLR1A	100	62.608	ENSHCOG00000003345	polr1a	100	62.291	Hippocampus_comes
ENSPCOG00000026987	POLR1A	100	66.763	ENSIPUG00000013174	polr1a	100	66.205	Ictalurus_punctatus
ENSPCOG00000026987	POLR1A	100	87.232	ENSSTOG00000012580	POLR1A	100	87.696	Ictidomys_tridecemlineatus
ENSPCOG00000026987	POLR1A	100	88.586	ENSJJAG00000013113	Polr1a	100	88.123	Jaculus_jaculus
ENSPCOG00000026987	POLR1A	100	65.099	ENSKMAG00000007399	polr1a	100	64.750	Kryptolebias_marmoratus
ENSPCOG00000026987	POLR1A	95	68.719	ENSLBEG00000015401	polr1a	99	68.245	Labrus_bergylta
ENSPCOG00000026987	POLR1A	53	76.931	ENSLACG00000003218	polr1a	100	76.931	Latimeria_chalumnae
ENSPCOG00000026987	POLR1A	100	70.670	ENSLOCG00000010881	polr1a	100	70.612	Lepisosteus_oculatus
ENSPCOG00000026987	POLR1A	100	89.532	ENSLAFG00000014948	POLR1A	100	89.589	Loxodonta_africana
ENSPCOG00000026987	POLR1A	100	92.388	ENSMFAG00000046097	POLR1A	100	92.504	Macaca_fascicularis
ENSPCOG00000026987	POLR1A	100	92.272	ENSMMUG00000015815	POLR1A	100	92.388	Macaca_mulatta
ENSPCOG00000026987	POLR1A	100	92.330	ENSMNEG00000043313	POLR1A	100	92.446	Macaca_nemestrina
ENSPCOG00000026987	POLR1A	100	91.749	ENSMLEG00000042428	POLR1A	100	91.865	Mandrillus_leucophaeus
ENSPCOG00000026987	POLR1A	100	65.531	ENSMAMG00000016565	polr1a	100	65.855	Mastacembelus_armatus
ENSPCOG00000026987	POLR1A	100	65.701	ENSMZEG00005004915	polr1a	100	65.569	Maylandia_zebra
ENSPCOG00000026987	POLR1A	99	69.275	ENSMGAG00000013111	POLR1A	99	69.217	Meleagris_gallopavo
ENSPCOG00000026987	POLR1A	92	88.020	ENSMAUG00000008497	Polr1a	100	87.957	Mesocricetus_auratus
ENSPCOG00000026987	POLR1A	100	97.095	ENSMICG00000000757	POLR1A	100	97.095	Microcebus_murinus
ENSPCOG00000026987	POLR1A	100	88.252	ENSMOCG00000000122	Polr1a	100	88.079	Microtus_ochrogaster
ENSPCOG00000026987	POLR1A	100	65.467	ENSMMOG00000010216	polr1a	100	65.797	Mola_mola
ENSPCOG00000026987	POLR1A	100	75.635	ENSMODG00000009335	POLR1A	100	75.751	Monodelphis_domestica
ENSPCOG00000026987	POLR1A	100	65.992	ENSMALG00000013363	polr1a	100	65.325	Monopterus_albus
ENSPCOG00000026987	POLR1A	100	86.979	MGP_CAROLIEiJ_G0028494	Polr1a	100	86.806	Mus_caroli
ENSPCOG00000026987	POLR1A	100	87.037	ENSMUSG00000049553	Polr1a	100	86.863	Mus_musculus
ENSPCOG00000026987	POLR1A	100	87.037	MGP_PahariEiJ_G0022230	Polr1a	100	86.863	Mus_pahari
ENSPCOG00000026987	POLR1A	100	85.438	MGP_SPRETEiJ_G0029499	Polr1a	100	85.918	Mus_spretus
ENSPCOG00000026987	POLR1A	100	91.226	ENSMPUG00000009135	POLR1A	100	91.284	Mustela_putorius_furo
ENSPCOG00000026987	POLR1A	100	89.075	ENSMLUG00000015723	POLR1A	100	88.902	Myotis_lucifugus
ENSPCOG00000026987	POLR1A	100	87.912	ENSNGAG00000017907	Polr1a	100	87.854	Nannospalax_galili
ENSPCOG00000026987	POLR1A	100	65.643	ENSNBRG00000000519	polr1a	100	65.875	Neolamprologus_brichardi
ENSPCOG00000026987	POLR1A	100	89.821	ENSNLEG00000002264	POLR1A	100	90.052	Nomascus_leucogenys
ENSPCOG00000026987	POLR1A	75	92.126	ENSMEUG00000011665	-	75	92.126	Notamacropus_eugenii
ENSPCOG00000026987	POLR1A	99	83.235	ENSOPRG00000008269	POLR1A	100	83.412	Ochotona_princeps
ENSPCOG00000026987	POLR1A	100	89.095	ENSODEG00000003542	POLR1A	100	88.921	Octodon_degus
ENSPCOG00000026987	POLR1A	100	66.126	ENSONIG00000015895	polr1a	100	66.126	Oreochromis_niloticus
ENSPCOG00000026987	POLR1A	100	90.883	ENSOCUG00000010138	POLR1A	100	91.231	Oryctolagus_cuniculus
ENSPCOG00000026987	POLR1A	100	64.988	ENSORLG00000008753	polr1a	99	64.479	Oryzias_latipes
ENSPCOG00000026987	POLR1A	100	63.947	ENSORLG00020020726	polr1a	99	63.234	Oryzias_latipes_hni
ENSPCOG00000026987	POLR1A	96	75.532	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSPCOG00000026987	POLR1A	100	93.031	ENSOGAG00000004031	POLR1A	100	93.144	Otolemur_garnettii
ENSPCOG00000026987	POLR1A	100	89.611	ENSOARG00000020601	POLR1A	100	89.843	Ovis_aries
ENSPCOG00000026987	POLR1A	100	91.923	ENSPPAG00000042450	POLR1A	100	92.156	Pan_paniscus
ENSPCOG00000026987	POLR1A	100	91.691	ENSPPRG00000006702	POLR1A	100	91.749	Panthera_pardus
ENSPCOG00000026987	POLR1A	100	91.257	ENSPTIG00000018783	POLR1A	100	91.314	Panthera_tigris_altaica
ENSPCOG00000026987	POLR1A	100	91.981	ENSPTRG00000012147	POLR1A	100	92.214	Pan_troglodytes
ENSPCOG00000026987	POLR1A	100	92.214	ENSPANG00000025908	POLR1A	100	92.330	Papio_anubis
ENSPCOG00000026987	POLR1A	94	76.389	ENSPKIG00000005468	polr1a	99	76.389	Paramormyrops_kingsleyae
ENSPCOG00000026987	POLR1A	63	71.415	ENSPSIG00000009321	-	99	71.691	Pelodiscus_sinensis
ENSPCOG00000026987	POLR1A	54	68.877	ENSPMGG00000009718	polr1a	95	68.877	Periophthalmus_magnuspinnatus
ENSPCOG00000026987	POLR1A	100	88.150	ENSPEMG00000022224	Polr1a	100	88.497	Peromyscus_maniculatus_bairdii
ENSPCOG00000026987	POLR1A	95	79.891	ENSPCIG00000004222	POLR1A	99	79.708	Phascolarctos_cinereus
ENSPCOG00000026987	POLR1A	100	64.794	ENSPFOG00000005025	polr1a	100	64.126	Poecilia_formosa
ENSPCOG00000026987	POLR1A	100	65.043	ENSPLAG00000021389	polr1a	100	64.483	Poecilia_latipinna
ENSPCOG00000026987	POLR1A	100	62.999	ENSPMEG00000006463	polr1a	100	62.493	Poecilia_mexicana
ENSPCOG00000026987	POLR1A	100	64.794	ENSPREG00000002389	polr1a	100	64.089	Poecilia_reticulata
ENSPCOG00000026987	POLR1A	100	91.110	ENSPPYG00000012217	POLR1A	100	91.342	Pongo_abelii
ENSPCOG00000026987	POLR1A	92	100.000	ENSPCAG00000011582	POLR1A	92	100.000	Procavia_capensis
ENSPCOG00000026987	POLR1A	95	90.441	ENSPVAG00000012674	POLR1A	95	90.106	Pteropus_vampyrus
ENSPCOG00000026987	POLR1A	100	65.701	ENSPNYG00000000026	polr1a	100	65.569	Pundamilia_nyererei
ENSPCOG00000026987	POLR1A	100	67.708	ENSPNAG00000019223	polr1a	99	67.847	Pygocentrus_nattereri
ENSPCOG00000026987	POLR1A	100	88.368	ENSRNOG00000009545	Polr1a	100	88.542	Rattus_norvegicus
ENSPCOG00000026987	POLR1A	100	91.517	ENSRBIG00000028335	POLR1A	100	91.749	Rhinopithecus_bieti
ENSPCOG00000026987	POLR1A	100	91.458	ENSRROG00000031473	POLR1A	100	91.691	Rhinopithecus_roxellana
ENSPCOG00000026987	POLR1A	99	36.818	YOR341W	RPA190	99	36.491	Saccharomyces_cerevisiae
ENSPCOG00000026987	POLR1A	100	90.761	ENSSBOG00000030262	POLR1A	100	90.761	Saimiri_boliviensis_boliviensis
ENSPCOG00000026987	POLR1A	100	73.963	ENSSHAG00000014739	POLR1A	100	73.906	Sarcophilus_harrisii
ENSPCOG00000026987	POLR1A	100	67.647	ENSSFOG00015019716	polr1a	100	67.398	Scleropages_formosus
ENSPCOG00000026987	POLR1A	100	66.377	ENSSMAG00000014342	polr1a	100	66.262	Scophthalmus_maximus
ENSPCOG00000026987	POLR1A	100	66.705	ENSSDUG00000014631	polr1a	100	66.590	Seriola_dumerili
ENSPCOG00000026987	POLR1A	100	65.162	ENSSLDG00000024095	polr1a	100	64.991	Seriola_lalandi_dorsalis
ENSPCOG00000026987	POLR1A	75	95.745	ENSSARG00000003136	-	76	95.745	Sorex_araneus
ENSPCOG00000026987	POLR1A	94	77.949	ENSSPUG00000004215	POLR1A	98	77.949	Sphenodon_punctatus
ENSPCOG00000026987	POLR1A	63	71.655	ENSSPAG00000016341	polr1a	94	71.655	Stegastes_partitus
ENSPCOG00000026987	POLR1A	83	90.826	ENSSSCG00000008226	POLR1A	99	90.730	Sus_scrofa
ENSPCOG00000026987	POLR1A	99	70.194	ENSTGUG00000010704	POLR1A	100	69.754	Taeniopygia_guttata
ENSPCOG00000026987	POLR1A	100	63.725	ENSTRUG00000002210	polr1a	97	65.336	Takifugu_rubripes
ENSPCOG00000026987	POLR1A	100	60.127	ENSTNIG00000010116	polr1a	100	60.069	Tetraodon_nigroviridis
ENSPCOG00000026987	POLR1A	74	96.903	ENSTBEG00000008646	POLR1A	74	96.903	Tupaia_belangeri
ENSPCOG00000026987	POLR1A	100	85.997	ENSTTRG00000008597	POLR1A	100	86.055	Tursiops_truncatus
ENSPCOG00000026987	POLR1A	69	91.216	ENSUAMG00000012158	-	94	91.301	Ursus_americanus
ENSPCOG00000026987	POLR1A	100	90.238	ENSUMAG00000006700	POLR1A	100	90.296	Ursus_maritimus
ENSPCOG00000026987	POLR1A	100	90.936	ENSVVUG00000001245	POLR1A	100	90.877	Vulpes_vulpes
ENSPCOG00000026987	POLR1A	100	68.203	ENSXETG00000001952	polr1a	100	69.602	Xenopus_tropicalis
ENSPCOG00000026987	POLR1A	100	65.046	ENSXMAG00000004032	polr1a	100	64.351	Xiphophorus_maculatus