EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000027049 (Gene tree)
Gene ID: 105818937
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 23455 bases
Position: chrKQ024402.1:4122945-4146399
Accession: 105818937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000028759	Gar1	PF04410.14	7.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000039692	GAR1-201	795	XM_012655080	ENSPCOP00000028759	196 (aa)	XP_012510534	A0A2K6GRC8

Gene Model

Click here to download ENSPCOG00000027049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000027049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000027049	GAR1	55	94.393	ENSAPOG00000019754	gar1	50	92.523	Acanthochromis_polyacanthus
ENSPCOG00000027049	GAR1	56	98.165	ENSAMEG00000004605	GAR1	52	98.131	Ailuropoda_melanoleuca
ENSPCOG00000027049	GAR1	55	94.393	ENSAOCG00000020947	gar1	50	92.523	Amphiprion_ocellaris
ENSPCOG00000027049	GAR1	55	94.393	ENSAPEG00000001676	gar1	50	92.523	Amphiprion_percula
ENSPCOG00000027049	GAR1	55	94.393	ENSATEG00000003733	gar1	50	92.523	Anabas_testudineus
ENSPCOG00000027049	GAR1	54	89.623	ENSAPLG00000010926	GAR1	58	89.524	Anas_platyrhynchos
ENSPCOG00000027049	GAR1	56	87.273	ENSAMXG00000015752	gar1	73	76.647	Astyanax_mexicanus
ENSPCOG00000027049	GAR1	56	99.083	ENSBTAG00000000748	GAR1	51	99.065	Bos_taurus
ENSPCOG00000027049	GAR1	54	99.057	ENSCAFG00020015566	GAR1	56	99.065	Canis_lupus_dingo
ENSPCOG00000027049	GAR1	66	88.462	ENSCHIG00000011049	-	63	84.348	Capra_hircus
ENSPCOG00000027049	GAR1	72	98.592	ENSCHIG00000016026	-	65	97.857	Capra_hircus
ENSPCOG00000027049	GAR1	56	91.743	ENSTSYG00000026632	-	55	91.589	Carlito_syrichta
ENSPCOG00000027049	GAR1	96	96.825	ENSTSYG00000013668	-	88	96.825	Carlito_syrichta
ENSPCOG00000027049	GAR1	62	98.347	ENSCPOG00000004216	GAR1	58	92.800	Cavia_porcellus
ENSPCOG00000027049	GAR1	56	100.000	ENSCATG00000021854	GAR1	54	100.000	Cercocebus_atys
ENSPCOG00000027049	GAR1	56	97.273	ENSCLAG00000005335	GAR1	96	96.104	Chinchilla_lanigera
ENSPCOG00000027049	GAR1	55	100.000	ENSCSAG00000003922	GAR1	54	100.000	Chlorocebus_sabaeus
ENSPCOG00000027049	GAR1	54	92.453	ENSCPBG00000004310	GAR1	85	75.148	Chrysemys_picta_bellii
ENSPCOG00000027049	GAR1	55	94.393	ENSCVAG00000002103	gar1	51	92.523	Cyprinodon_variegatus
ENSPCOG00000027049	GAR1	56	99.083	ENSDNOG00000037632	GAR1	54	99.065	Dasypus_novemcinctus
ENSPCOG00000027049	GAR1	97	96.335	ENSEASG00005004658	GAR1	88	96.335	Equus_asinus_asinus
ENSPCOG00000027049	GAR1	97	96.859	ENSECAG00000013624	GAR1	94	98.387	Equus_caballus
ENSPCOG00000027049	GAR1	86	53.571	ENSFCAG00000025841	-	69	63.636	Felis_catus
ENSPCOG00000027049	GAR1	56	99.083	ENSFCAG00000040791	-	51	99.065	Felis_catus
ENSPCOG00000027049	GAR1	57	91.892	ENSFHEG00000008068	gar1	50	91.589	Fundulus_heteroclitus
ENSPCOG00000027049	GAR1	53	93.269	ENSGAGG00000004393	GAR1	55	91.589	Gopherus_agassizii
ENSPCOG00000027049	GAR1	57	80.180	ENSGGOG00000036205	-	53	80.189	Gorilla_gorilla
ENSPCOG00000027049	GAR1	55	98.131	ENSHGLG00000000493	GAR1	99	97.333	Heterocephalus_glaber_female
ENSPCOG00000027049	GAR1	69	84.444	ENSIPUG00000003194	gar1	51	89.720	Ictalurus_punctatus
ENSPCOG00000027049	GAR1	56	97.248	ENSSTOG00000005577	GAR1	68	96.154	Ictidomys_tridecemlineatus
ENSPCOG00000027049	GAR1	57	89.189	ENSKMAG00000010402	gar1	51	89.720	Kryptolebias_marmoratus
ENSPCOG00000027049	GAR1	54	87.736	ENSLACG00000003306	GAR1	75	66.013	Latimeria_chalumnae
ENSPCOG00000027049	GAR1	55	84.259	ENSMFAG00000003572	-	52	82.243	Macaca_fascicularis
ENSPCOG00000027049	GAR1	56	96.330	ENSMAUG00000016788	Gar1	66	98.077	Mesocricetus_auratus
ENSPCOG00000027049	GAR1	56	95.413	ENSMOCG00000001340	Gar1	66	100.000	Microtus_ochrogaster
ENSPCOG00000027049	GAR1	55	95.327	ENSMMOG00000004156	gar1	51	95.192	Mola_mola
ENSPCOG00000027049	GAR1	56	96.330	MGP_CAROLIEiJ_G0025627	Gar1	82	88.136	Mus_caroli
ENSPCOG00000027049	GAR1	56	96.364	ENSMUSG00000028010	Gar1	89	85.227	Mus_musculus
ENSPCOG00000027049	GAR1	56	98.182	MGP_PahariEiJ_G0027076	Gar1	75	94.286	Mus_pahari
ENSPCOG00000027049	GAR1	56	96.364	MGP_SPRETEiJ_G0026580	Gar1	89	84.659	Mus_spretus
ENSPCOG00000027049	GAR1	97	94.764	ENSMPUG00000008615	GAR1	51	99.065	Mustela_putorius_furo
ENSPCOG00000027049	GAR1	56	98.182	ENSNGAG00000008268	Gar1	92	98.592	Nannospalax_galili
ENSPCOG00000027049	GAR1	79	68.182	ENSNLEG00000034282	-	54	83.178	Nomascus_leucogenys
ENSPCOG00000027049	GAR1	56	100.000	ENSNLEG00000016578	GAR1	50	100.000	Nomascus_leucogenys
ENSPCOG00000027049	GAR1	56	84.404	ENSOPRG00000012089	GAR1	53	80.000	Ochotona_princeps
ENSPCOG00000027049	GAR1	60	98.305	ENSODEG00000011083	GAR1	64	91.200	Octodon_degus
ENSPCOG00000027049	GAR1	56	99.083	ENSOCUG00000003901	GAR1	50	99.065	Oryctolagus_cuniculus
ENSPCOG00000027049	GAR1	96	97.354	ENSOGAG00000004693	GAR1	88	97.354	Otolemur_garnettii
ENSPCOG00000027049	GAR1	72	98.592	ENSOARG00000004910	GAR1	66	97.857	Ovis_aries
ENSPCOG00000027049	GAR1	56	100.000	ENSPPAG00000014081	GAR1	54	100.000	Pan_paniscus
ENSPCOG00000027049	GAR1	97	94.764	ENSPPRG00000023697	GAR1	51	99.065	Panthera_pardus
ENSPCOG00000027049	GAR1	97	94.764	ENSPTIG00000021565	GAR1	51	99.065	Panthera_tigris_altaica
ENSPCOG00000027049	GAR1	56	100.000	ENSPTRG00000016364	GAR1	54	100.000	Pan_troglodytes
ENSPCOG00000027049	GAR1	56	96.330	ENSPEMG00000015838	Gar1	66	98.077	Peromyscus_maniculatus_bairdii
ENSPCOG00000027049	GAR1	60	92.308	ENSPFOG00000024155	gar1	59	84.800	Poecilia_formosa
ENSPCOG00000027049	GAR1	60	92.308	ENSPLAG00000015056	gar1	59	84.800	Poecilia_latipinna
ENSPCOG00000027049	GAR1	60	93.162	ENSPMEG00000009320	gar1	60	85.600	Poecilia_mexicana
ENSPCOG00000027049	GAR1	64	91.200	ENSPREG00000010377	gar1	62	77.241	Poecilia_reticulata
ENSPCOG00000027049	GAR1	56	97.273	ENSRNOG00000061146	Gar1	63	97.196	Rattus_norvegicus
ENSPCOG00000027049	GAR1	57	82.143	ENSRBIG00000042411	-	52	81.308	Rhinopithecus_bieti
ENSPCOG00000027049	GAR1	55	100.000	ENSRBIG00000019547	GAR1	54	100.000	Rhinopithecus_bieti
ENSPCOG00000027049	GAR1	56	100.000	ENSRROG00000028454	GAR1	54	100.000	Rhinopithecus_roxellana
ENSPCOG00000027049	GAR1	57	82.143	ENSRROG00000044348	-	51	81.308	Rhinopithecus_roxellana
ENSPCOG00000027049	GAR1	56	100.000	ENSSBOG00000024785	GAR1	50	100.000	Saimiri_boliviensis_boliviensis
ENSPCOG00000027049	GAR1	54	93.396	ENSSHAG00000002161	GAR1	60	84.173	Sarcophilus_harrisii
ENSPCOG00000027049	GAR1	55	93.458	ENSSLDG00000023264	gar1	50	91.589	Seriola_lalandi_dorsalis
ENSPCOG00000027049	GAR1	54	93.396	ENSSPUG00000008707	GAR1	60	91.589	Sphenodon_punctatus
ENSPCOG00000027049	GAR1	56	99.091	ENSSSCG00000009137	GAR1	53	99.065	Sus_scrofa
ENSPCOG00000027049	GAR1	51	89.899	ENSTGUG00000004185	GAR1	65	90.625	Taeniopygia_guttata
ENSPCOG00000027049	GAR1	55	90.654	ENSTRUG00000020580	gar1	51	88.785	Takifugu_rubripes
ENSPCOG00000027049	GAR1	53	93.269	ENSTNIG00000013023	gar1	61	91.589	Tetraodon_nigroviridis
ENSPCOG00000027049	GAR1	54	99.057	ENSUAMG00000005652	GAR1	56	99.065	Ursus_americanus
ENSPCOG00000027049	GAR1	97	93.194	ENSUMAG00000000776	GAR1	89	93.194	Ursus_maritimus
ENSPCOG00000027049	GAR1	97	94.764	ENSVPAG00000009844	GAR1	79	94.764	Vicugna_pacos
ENSPCOG00000027049	GAR1	56	99.083	ENSVVUG00000017612	GAR1	55	99.065	Vulpes_vulpes