EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000027539 (Gene tree)
Gene ID: 105818454
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 6680 bases
Position: chrKQ024181.1:581491-588170
Accession: 105818454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000029643	ECR1_N	PF14382.6	3.2e-09	1	1
ENSPCOP00000029642	ECR1_N	PF14382.6	4.3e-09	1	1
ENSPCOP00000029640	ECR1_N	PF14382.6	5.5e-09	1	1
ENSPCOP00000029641	ECR1_N	PF14382.6	5.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000040588	EXOSC1-204	384	-	ENSPCOP00000029643	128 (aa)	-	A0A2K6GTT9
ENSPCOT00000040585	EXOSC1-201	552	XM_012654451	ENSPCOP00000029640	183 (aa)	XP_012509905	A0A2K6GTR1
ENSPCOT00000040587	EXOSC1-203	477	-	ENSPCOP00000029642	158 (aa)	-	A0A2K6GTV2
ENSPCOT00000040586	EXOSC1-202	501	-	ENSPCOP00000029641	166 (aa)	-	A0A2K6GTR3

Gene Model

Click here to download ENSPCOG00000027539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000027539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000027539	EXOSC1	100	90.769	ENSG00000171311	EXOSC1	100	90.769	Homo_sapiens
ENSPCOG00000027539	EXOSC1	98	73.822	ENSAPOG00000007822	exosc1	98	73.822	Acanthochromis_polyacanthus
ENSPCOG00000027539	EXOSC1	100	92.308	ENSAMEG00000000129	EXOSC1	100	92.308	Ailuropoda_melanoleuca
ENSPCOG00000027539	EXOSC1	96	73.404	ENSACIG00000018956	exosc1	92	73.404	Amphilophus_citrinellus
ENSPCOG00000027539	EXOSC1	98	73.822	ENSAOCG00000010699	exosc1	98	73.822	Amphiprion_ocellaris
ENSPCOG00000027539	EXOSC1	90	73.125	ENSAPEG00000012690	exosc1	96	73.125	Amphiprion_percula
ENSPCOG00000027539	EXOSC1	98	73.298	ENSATEG00000018683	exosc1	98	73.298	Anabas_testudineus
ENSPCOG00000027539	EXOSC1	99	80.311	ENSACAG00000002101	EXOSC1	99	80.311	Anolis_carolinensis
ENSPCOG00000027539	EXOSC1	100	92.308	ENSANAG00000034669	EXOSC1	100	92.308	Aotus_nancymaae
ENSPCOG00000027539	EXOSC1	98	73.822	ENSACLG00000021243	exosc1	98	73.822	Astatotilapia_calliptera
ENSPCOG00000027539	EXOSC1	98	75.393	ENSAMXG00000011116	exosc1	98	75.393	Astyanax_mexicanus
ENSPCOG00000027539	EXOSC1	100	92.746	ENSBTAG00000012699	EXOSC1	100	92.746	Bos_taurus
ENSPCOG00000027539	EXOSC1	91	31.383	WBGene00012966	exos-1	90	31.383	Caenorhabditis_elegans
ENSPCOG00000027539	EXOSC1	100	92.308	ENSCJAG00000016586	EXOSC1	100	92.308	Callithrix_jacchus
ENSPCOG00000027539	EXOSC1	100	91.795	ENSCAFG00000009068	EXOSC1	94	91.795	Canis_familiaris
ENSPCOG00000027539	EXOSC1	100	91.795	ENSCAFG00020006002	EXOSC1	94	91.795	Canis_lupus_dingo
ENSPCOG00000027539	EXOSC1	100	91.795	ENSCHIG00000015253	EXOSC1	100	91.795	Capra_hircus
ENSPCOG00000027539	EXOSC1	100	91.282	ENSTSYG00000000760	EXOSC1	100	91.282	Carlito_syrichta
ENSPCOG00000027539	EXOSC1	100	91.795	ENSCPOG00000001173	EXOSC1	100	91.795	Cavia_porcellus
ENSPCOG00000027539	EXOSC1	100	59.494	ENSCCAG00000023986	EXOSC1	100	59.494	Cebus_capucinus
ENSPCOG00000027539	EXOSC1	100	90.769	ENSCATG00000034114	EXOSC1	100	90.769	Cercocebus_atys
ENSPCOG00000027539	EXOSC1	100	92.308	ENSCLAG00000002463	EXOSC1	100	92.308	Chinchilla_lanigera
ENSPCOG00000027539	EXOSC1	100	90.256	ENSCSAG00000005870	EXOSC1	100	90.256	Chlorocebus_sabaeus
ENSPCOG00000027539	EXOSC1	96	77.957	ENSCHOG00000006477	EXOSC1	100	77.957	Choloepus_hoffmanni
ENSPCOG00000027539	EXOSC1	73	80.645	ENSCPBG00000011949	EXOSC1	77	80.645	Chrysemys_picta_bellii
ENSPCOG00000027539	EXOSC1	95	50.802	ENSCING00000022734	-	89	50.802	Ciona_intestinalis
ENSPCOG00000027539	EXOSC1	95	53.476	ENSCSAVG00000010865	-	95	53.476	Ciona_savignyi
ENSPCOG00000027539	EXOSC1	100	90.769	ENSCANG00000034159	EXOSC1	100	90.769	Colobus_angolensis_palliatus
ENSPCOG00000027539	EXOSC1	100	91.282	ENSCGRG00001000335	Exosc1	100	91.282	Cricetulus_griseus_chok1gshd
ENSPCOG00000027539	EXOSC1	100	91.282	ENSCGRG00000011602	Exosc1	100	91.282	Cricetulus_griseus_crigri
ENSPCOG00000027539	EXOSC1	97	70.482	ENSCSEG00000007895	exosc1	95	70.482	Cynoglossus_semilaevis
ENSPCOG00000027539	EXOSC1	98	71.204	ENSCVAG00000016748	exosc1	98	71.204	Cyprinodon_variegatus
ENSPCOG00000027539	EXOSC1	98	74.869	ENSDARG00000059841	exosc1	98	74.869	Danio_rerio
ENSPCOG00000027539	EXOSC1	80	98.077	ENSDNOG00000007983	EXOSC1	100	90.541	Dasypus_novemcinctus
ENSPCOG00000027539	EXOSC1	100	91.282	ENSDORG00000016528	Exosc1	100	91.282	Dipodomys_ordii
ENSPCOG00000027539	EXOSC1	94	43.915	FBgn0032346	Csl4	92	43.915	Drosophila_melanogaster
ENSPCOG00000027539	EXOSC1	100	89.744	ENSETEG00000002469	-	100	89.744	Echinops_telfairi
ENSPCOG00000027539	EXOSC1	99	56.122	ENSEBUG00000008164	exosc1	98	56.122	Eptatretus_burgeri
ENSPCOG00000027539	EXOSC1	100	82.447	ENSEASG00005008684	EXOSC1	100	82.447	Equus_asinus_asinus
ENSPCOG00000027539	EXOSC1	100	73.571	ENSECAG00000010621	EXOSC1	85	73.571	Equus_caballus
ENSPCOG00000027539	EXOSC1	100	91.282	ENSEEUG00000005647	EXOSC1	100	91.282	Erinaceus_europaeus
ENSPCOG00000027539	EXOSC1	97	72.121	ENSELUG00000017369	exosc1	97	72.121	Esox_lucius
ENSPCOG00000027539	EXOSC1	100	92.308	ENSFCAG00000040563	EXOSC1	100	91.765	Felis_catus
ENSPCOG00000027539	EXOSC1	100	77.949	ENSFALG00000008450	EXOSC1	100	77.949	Ficedula_albicollis
ENSPCOG00000027539	EXOSC1	100	92.308	ENSFDAG00000000846	EXOSC1	100	92.308	Fukomys_damarensis
ENSPCOG00000027539	EXOSC1	98	71.204	ENSFHEG00000009154	exosc1	98	71.204	Fundulus_heteroclitus
ENSPCOG00000027539	EXOSC1	98	73.298	ENSGMOG00000008993	exosc1	98	73.298	Gadus_morhua
ENSPCOG00000027539	EXOSC1	100	77.059	ENSGALG00000039917	EXOSC1	100	79.452	Gallus_gallus
ENSPCOG00000027539	EXOSC1	98	71.728	ENSGAFG00000010265	exosc1	94	71.728	Gambusia_affinis
ENSPCOG00000027539	EXOSC1	98	73.822	ENSGACG00000018936	exosc1	98	73.822	Gasterosteus_aculeatus
ENSPCOG00000027539	EXOSC1	100	79.487	ENSGAGG00000019192	EXOSC1	100	79.487	Gopherus_agassizii
ENSPCOG00000027539	EXOSC1	100	89.412	ENSGGOG00000003099	EXOSC1	100	89.412	Gorilla_gorilla
ENSPCOG00000027539	EXOSC1	98	73.822	ENSHBUG00000017857	exosc1	98	73.822	Haplochromis_burtoni
ENSPCOG00000027539	EXOSC1	100	91.795	ENSHGLG00000016927	EXOSC1	100	91.795	Heterocephalus_glaber_female
ENSPCOG00000027539	EXOSC1	100	91.795	ENSHGLG00100012208	EXOSC1	100	91.795	Heterocephalus_glaber_male
ENSPCOG00000027539	EXOSC1	98	72.775	ENSHCOG00000019882	exosc1	98	72.775	Hippocampus_comes
ENSPCOG00000027539	EXOSC1	98	74.346	ENSIPUG00000007685	exosc1	98	74.346	Ictalurus_punctatus
ENSPCOG00000027539	EXOSC1	100	92.308	ENSSTOG00000006615	EXOSC1	100	92.308	Ictidomys_tridecemlineatus
ENSPCOG00000027539	EXOSC1	80	85.437	ENSSTOG00000029860	-	78	85.437	Ictidomys_tridecemlineatus
ENSPCOG00000027539	EXOSC1	100	91.282	ENSJJAG00000013311	Exosc1	100	91.282	Jaculus_jaculus
ENSPCOG00000027539	EXOSC1	98	71.875	ENSKMAG00000001202	exosc1	81	71.875	Kryptolebias_marmoratus
ENSPCOG00000027539	EXOSC1	98	75.978	ENSLBEG00000011448	exosc1	98	75.978	Labrus_bergylta
ENSPCOG00000027539	EXOSC1	98	63.804	ENSLOCG00000003776	exosc1	99	63.804	Lepisosteus_oculatus
ENSPCOG00000027539	EXOSC1	100	91.282	ENSLAFG00000015983	EXOSC1	100	91.282	Loxodonta_africana
ENSPCOG00000027539	EXOSC1	100	90.769	ENSMFAG00000001493	EXOSC1	100	90.769	Macaca_fascicularis
ENSPCOG00000027539	EXOSC1	100	90.769	ENSMMUG00000020028	EXOSC1	100	90.000	Macaca_mulatta
ENSPCOG00000027539	EXOSC1	100	90.769	ENSMNEG00000029816	EXOSC1	100	90.769	Macaca_nemestrina
ENSPCOG00000027539	EXOSC1	100	91.710	ENSMLEG00000027643	EXOSC1	100	91.710	Mandrillus_leucophaeus
ENSPCOG00000027539	EXOSC1	98	74.346	ENSMAMG00000012200	exosc1	98	74.346	Mastacembelus_armatus
ENSPCOG00000027539	EXOSC1	98	73.822	ENSMZEG00005007042	exosc1	98	73.822	Maylandia_zebra
ENSPCOG00000027539	EXOSC1	100	90.588	ENSMAUG00000020462	-	100	90.588	Mesocricetus_auratus
ENSPCOG00000027539	EXOSC1	100	93.846	ENSMICG00000007664	EXOSC1	100	93.258	Microcebus_murinus
ENSPCOG00000027539	EXOSC1	100	91.282	ENSMOCG00000006004	-	100	91.282	Microtus_ochrogaster
ENSPCOG00000027539	EXOSC1	97	90.761	ENSMOCG00000017124	-	97	90.761	Microtus_ochrogaster
ENSPCOG00000027539	EXOSC1	99	64.286	ENSMMOG00000021403	exosc1	99	64.286	Mola_mola
ENSPCOG00000027539	EXOSC1	100	86.224	ENSMODG00000004213	EXOSC1	100	86.224	Monodelphis_domestica
ENSPCOG00000027539	EXOSC1	94	74.457	ENSMALG00000007061	exosc1	92	74.457	Monopterus_albus
ENSPCOG00000027539	EXOSC1	100	90.769	MGP_CAROLIEiJ_G0022959	Exosc1	100	90.769	Mus_caroli
ENSPCOG00000027539	EXOSC1	100	90.256	ENSMUSG00000034321	Exosc1	100	90.256	Mus_musculus
ENSPCOG00000027539	EXOSC1	100	91.282	MGP_PahariEiJ_G0014449	Exosc1	100	91.282	Mus_pahari
ENSPCOG00000027539	EXOSC1	100	90.769	MGP_SPRETEiJ_G0023880	Exosc1	100	90.769	Mus_spretus
ENSPCOG00000027539	EXOSC1	100	92.308	ENSMPUG00000017044	EXOSC1	100	92.308	Mustela_putorius_furo
ENSPCOG00000027539	EXOSC1	100	91.795	ENSMLUG00000009228	EXOSC1	100	91.795	Myotis_lucifugus
ENSPCOG00000027539	EXOSC1	100	90.256	ENSNGAG00000022033	Exosc1	100	90.256	Nannospalax_galili
ENSPCOG00000027539	EXOSC1	98	64.444	ENSNBRG00000024007	exosc1	98	64.444	Neolamprologus_brichardi
ENSPCOG00000027539	EXOSC1	100	90.769	ENSNLEG00000013872	EXOSC1	100	90.769	Nomascus_leucogenys
ENSPCOG00000027539	EXOSC1	80	90.291	ENSMEUG00000002246	EXOSC1	90	90.291	Notamacropus_eugenii
ENSPCOG00000027539	EXOSC1	100	90.769	ENSOPRG00000005065	EXOSC1	100	90.769	Ochotona_princeps
ENSPCOG00000027539	EXOSC1	100	91.795	ENSODEG00000016709	EXOSC1	100	91.795	Octodon_degus
ENSPCOG00000027539	EXOSC1	98	73.822	ENSONIG00000017683	exosc1	98	73.822	Oreochromis_niloticus
ENSPCOG00000027539	EXOSC1	65	83.478	ENSOANG00000006563	EXOSC1	100	81.746	Ornithorhynchus_anatinus
ENSPCOG00000027539	EXOSC1	100	86.154	ENSOCUG00000026461	-	100	86.154	Oryctolagus_cuniculus
ENSPCOG00000027539	EXOSC1	100	90.816	ENSOCUG00000011898	-	100	90.816	Oryctolagus_cuniculus
ENSPCOG00000027539	EXOSC1	98	71.875	ENSORLG00000011595	exosc1	98	71.875	Oryzias_latipes
ENSPCOG00000027539	EXOSC1	98	71.875	ENSORLG00020005831	exosc1	98	71.875	Oryzias_latipes_hni
ENSPCOG00000027539	EXOSC1	98	71.875	ENSORLG00015004317	exosc1	98	71.875	Oryzias_latipes_hsok
ENSPCOG00000027539	EXOSC1	98	65.574	ENSOMEG00000013907	exosc1	98	65.574	Oryzias_melastigma
ENSPCOG00000027539	EXOSC1	100	92.308	ENSOGAG00000016259	EXOSC1	100	92.308	Otolemur_garnettii
ENSPCOG00000027539	EXOSC1	100	91.282	ENSOARG00000010136	EXOSC1	100	91.282	Ovis_aries
ENSPCOG00000027539	EXOSC1	100	89.848	ENSPPAG00000039842	EXOSC1	100	89.848	Pan_paniscus
ENSPCOG00000027539	EXOSC1	100	92.308	ENSPPRG00000023366	EXOSC1	100	92.308	Panthera_pardus
ENSPCOG00000027539	EXOSC1	100	92.308	ENSPTIG00000017701	EXOSC1	100	92.308	Panthera_tigris_altaica
ENSPCOG00000027539	EXOSC1	100	90.769	ENSPTRG00000002808	EXOSC1	100	90.769	Pan_troglodytes
ENSPCOG00000027539	EXOSC1	100	90.769	ENSPANG00000021324	EXOSC1	100	90.769	Papio_anubis
ENSPCOG00000027539	EXOSC1	98	74.869	ENSPKIG00000016037	exosc1	98	74.869	Paramormyrops_kingsleyae
ENSPCOG00000027539	EXOSC1	76	78.146	ENSPSIG00000013571	EXOSC1	98	79.339	Pelodiscus_sinensis
ENSPCOG00000027539	EXOSC1	97	69.880	ENSPMGG00000014002	exosc1	98	69.880	Periophthalmus_magnuspinnatus
ENSPCOG00000027539	EXOSC1	100	91.282	ENSPEMG00000010710	-	100	91.282	Peromyscus_maniculatus_bairdii
ENSPCOG00000027539	EXOSC1	95	64.706	ENSPMAG00000000195	exosc1	95	64.706	Petromyzon_marinus
ENSPCOG00000027539	EXOSC1	100	87.179	ENSPCIG00000002210	EXOSC1	99	87.179	Phascolarctos_cinereus
ENSPCOG00000027539	EXOSC1	98	70.312	ENSPFOG00000006755	exosc1	94	70.312	Poecilia_formosa
ENSPCOG00000027539	EXOSC1	98	70.681	ENSPLAG00000005880	exosc1	98	70.681	Poecilia_latipinna
ENSPCOG00000027539	EXOSC1	98	70.312	ENSPMEG00000015598	exosc1	94	70.312	Poecilia_mexicana
ENSPCOG00000027539	EXOSC1	98	68.263	ENSPREG00000000405	exosc1	93	68.263	Poecilia_reticulata
ENSPCOG00000027539	EXOSC1	100	90.256	ENSPPYG00000002531	EXOSC1	100	90.256	Pongo_abelii
ENSPCOG00000027539	EXOSC1	100	91.282	ENSPCAG00000009135	EXOSC1	100	91.282	Procavia_capensis
ENSPCOG00000027539	EXOSC1	100	92.308	ENSPVAG00000003372	EXOSC1	100	92.308	Pteropus_vampyrus
ENSPCOG00000027539	EXOSC1	98	73.822	ENSPNYG00000021745	exosc1	98	73.822	Pundamilia_nyererei
ENSPCOG00000027539	EXOSC1	98	74.346	ENSPNAG00000001944	exosc1	98	74.346	Pygocentrus_nattereri
ENSPCOG00000027539	EXOSC1	100	91.282	ENSRNOG00000048708	Exosc1	100	91.282	Rattus_norvegicus
ENSPCOG00000027539	EXOSC1	100	90.769	ENSRBIG00000035618	EXOSC1	100	90.769	Rhinopithecus_bieti
ENSPCOG00000027539	EXOSC1	100	90.769	ENSRROG00000032589	EXOSC1	100	90.000	Rhinopithecus_roxellana
ENSPCOG00000027539	EXOSC1	100	92.308	ENSSBOG00000000359	EXOSC1	100	92.308	Saimiri_boliviensis_boliviensis
ENSPCOG00000027539	EXOSC1	73	87.755	ENSSHAG00000018219	EXOSC1	100	87.755	Sarcophilus_harrisii
ENSPCOG00000027539	EXOSC1	97	71.579	ENSSFOG00015016289	-	98	71.579	Scleropages_formosus
ENSPCOG00000027539	EXOSC1	98	76.042	ENSSFOG00015009069	exosc1	99	76.042	Scleropages_formosus
ENSPCOG00000027539	EXOSC1	98	74.346	ENSSMAG00000003721	exosc1	98	74.346	Scophthalmus_maximus
ENSPCOG00000027539	EXOSC1	98	73.822	ENSSDUG00000002993	exosc1	98	73.822	Seriola_dumerili
ENSPCOG00000027539	EXOSC1	98	73.822	ENSSLDG00000025181	exosc1	98	73.822	Seriola_lalandi_dorsalis
ENSPCOG00000027539	EXOSC1	100	77.436	ENSSARG00000000162	EXOSC1	100	77.436	Sorex_araneus
ENSPCOG00000027539	EXOSC1	99	77.320	ENSSPUG00000012263	EXOSC1	99	77.320	Sphenodon_punctatus
ENSPCOG00000027539	EXOSC1	98	71.839	ENSSPAG00000016792	exosc1	82	71.839	Stegastes_partitus
ENSPCOG00000027539	EXOSC1	100	91.282	ENSSSCG00000010518	EXOSC1	91	91.282	Sus_scrofa
ENSPCOG00000027539	EXOSC1	98	75.521	ENSTGUG00000009692	EXOSC1	99	75.521	Taeniopygia_guttata
ENSPCOG00000027539	EXOSC1	97	67.725	ENSTRUG00000007706	exosc1	98	67.725	Takifugu_rubripes
ENSPCOG00000027539	EXOSC1	97	67.708	ENSTNIG00000014079	exosc1	97	67.708	Tetraodon_nigroviridis
ENSPCOG00000027539	EXOSC1	100	83.077	ENSTBEG00000006011	EXOSC1	100	83.077	Tupaia_belangeri
ENSPCOG00000027539	EXOSC1	94	91.304	ENSTTRG00000009887	EXOSC1	100	91.304	Tursiops_truncatus
ENSPCOG00000027539	EXOSC1	100	86.885	ENSUAMG00000010266	EXOSC1	100	86.885	Ursus_americanus
ENSPCOG00000027539	EXOSC1	100	86.885	ENSUMAG00000022002	EXOSC1	100	86.885	Ursus_maritimus
ENSPCOG00000027539	EXOSC1	100	91.795	ENSVVUG00000023192	EXOSC1	63	91.795	Vulpes_vulpes
ENSPCOG00000027539	EXOSC1	98	73.438	ENSXETG00000003434	exosc1	99	73.438	Xenopus_tropicalis
ENSPCOG00000027539	EXOSC1	68	76.667	ENSXCOG00000014499	exosc1	92	76.667	Xiphophorus_couchianus
ENSPCOG00000027539	EXOSC1	98	68.862	ENSXMAG00000023382	exosc1	93	68.862	Xiphophorus_maculatus