EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000027546 (Gene tree)
Gene ID: 105827377
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 14347 bases
Position: chrKQ015204.1:1919370-1933716
Accession: 105827377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000029732	KH_1	PF00013.29	1.5e-07	1	1
ENSPCOP00000029731	KH_1	PF00013.29	1.5e-07	1	1
ENSPCOP00000029735	KH_1	PF00013.29	2e-07	1	1
ENSPCOP00000029707	KH_1	PF00013.29	3e-07	1	1
ENSPCOP00000029712	KH_1	PF00013.29	3.1e-07	1	1
ENSPCOP00000029727	KH_1	PF00013.29	3.1e-07	1	1
ENSPCOP00000029732	zf-CCHC	PF00098.23	0.00014	1	1
ENSPCOP00000029735	zf-CCHC	PF00098.23	0.00014	1	1
ENSPCOP00000029731	zf-CCHC	PF00098.23	0.00014	1	1
ENSPCOP00000029727	zf-CCHC	PF00098.23	0.0002	1	1
ENSPCOP00000029712	zf-CCHC	PF00098.23	0.0002	1	1
ENSPCOP00000029707	zf-CCHC	PF00098.23	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000040677	SF1-205	1278	-	ENSPCOP00000029732	425 (aa)	-	A0A2K6GU34
ENSPCOT00000040676	SF1-204	1260	-	ENSPCOP00000029731	419 (aa)	-	A0A2K6GU01
ENSPCOT00000040672	SF1-203	1944	-	ENSPCOP00000029727	647 (aa)	-	A0A2K6GU29
ENSPCOT00000040680	SF1-206	1476	-	ENSPCOP00000029735	491 (aa)	-	A0A2K6GTZ9
ENSPCOT00000040657	SF1-202	3169	XM_012665486	ENSPCOP00000029712	637 (aa)	XP_012520940	A0A2K6GU14
ENSPCOT00000040652	SF1-201	3604	XM_012665487	ENSPCOP00000029707	638 (aa)	XP_012520941	A0A2K6GU11

Gene Model

Click here to download ENSPCOG00000027546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000027546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000027546	SF1	90	80.720	ENSAPOG00000012341	sf1	61	75.581	Acanthochromis_polyacanthus
ENSPCOG00000027546	SF1	94	99.500	ENSAMEG00000017828	SF1	100	92.535	Ailuropoda_melanoleuca
ENSPCOG00000027546	SF1	89	82.493	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSPCOG00000027546	SF1	90	80.206	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSPCOG00000027546	SF1	90	80.206	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSPCOG00000027546	SF1	89	81.365	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSPCOG00000027546	SF1	96	87.255	ENSANAG00000022607	-	99	87.562	Aotus_nancymaae
ENSPCOG00000027546	SF1	100	99.687	ENSANAG00000026664	-	100	99.687	Aotus_nancymaae
ENSPCOG00000027546	SF1	88	84.054	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSPCOG00000027546	SF1	88	85.600	ENSAMXG00000003630	sf1	50	82.507	Astyanax_mexicanus
ENSPCOG00000027546	SF1	100	99.844	ENSBTAG00000001035	SF1	100	99.844	Bos_taurus
ENSPCOG00000027546	SF1	100	99.844	ENSCJAG00000002780	SF1	100	99.844	Callithrix_jacchus
ENSPCOG00000027546	SF1	100	99.843	ENSCAFG00000014239	SF1	100	99.843	Canis_familiaris
ENSPCOG00000027546	SF1	100	99.844	ENSCAFG00020014381	SF1	100	99.844	Canis_lupus_dingo
ENSPCOG00000027546	SF1	100	99.844	ENSCHIG00000025867	SF1	100	99.844	Capra_hircus
ENSPCOG00000027546	SF1	82	98.571	ENSTSYG00000033618	SF1	98	98.571	Carlito_syrichta
ENSPCOG00000027546	SF1	93	99.244	ENSCAPG00000010762	SF1	87	98.413	Cavia_aperea
ENSPCOG00000027546	SF1	98	99.362	ENSCPOG00000012290	SF1	100	99.362	Cavia_porcellus
ENSPCOG00000027546	SF1	100	99.843	ENSCCAG00000037881	SF1	100	99.843	Cebus_capucinus
ENSPCOG00000027546	SF1	99	85.885	ENSCCAG00000023781	-	94	85.435	Cebus_capucinus
ENSPCOG00000027546	SF1	100	99.844	ENSCATG00000011564	SF1	100	99.844	Cercocebus_atys
ENSPCOG00000027546	SF1	96	99.755	ENSCSAG00000007258	SF1	97	99.622	Chlorocebus_sabaeus
ENSPCOG00000027546	SF1	89	92.876	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSPCOG00000027546	SF1	93	89.673	ENSCPBG00000023763	SF1	66	85.135	Chrysemys_picta_bellii
ENSPCOG00000027546	SF1	86	59.786	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSPCOG00000027546	SF1	86	58.987	ENSCSAVG00000009055	-	72	63.576	Ciona_savignyi
ENSPCOG00000027546	SF1	100	99.844	ENSCANG00000042201	SF1	100	99.844	Colobus_angolensis_palliatus
ENSPCOG00000027546	SF1	100	99.374	ENSCGRG00001003677	Sf1	100	99.374	Cricetulus_griseus_chok1gshd
ENSPCOG00000027546	SF1	93	98.992	ENSCGRG00000001708	Sf1	97	97.905	Cricetulus_griseus_crigri
ENSPCOG00000027546	SF1	93	78.133	ENSCSEG00000014375	sf1	57	76.271	Cynoglossus_semilaevis
ENSPCOG00000027546	SF1	89	84.097	ENSCVAG00000001670	sf1	64	78.484	Cyprinodon_variegatus
ENSPCOG00000027546	SF1	94	81.188	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSPCOG00000027546	SF1	96	99.020	ENSDNOG00000001282	SF1	97	99.055	Dasypus_novemcinctus
ENSPCOG00000027546	SF1	100	99.844	ENSDORG00000016334	Sf1	100	99.844	Dipodomys_ordii
ENSPCOG00000027546	SF1	93	89.169	ENSETEG00000012830	SF1	77	91.171	Echinops_telfairi
ENSPCOG00000027546	SF1	96	99.265	ENSEASG00005018272	SF1	97	99.244	Equus_asinus_asinus
ENSPCOG00000027546	SF1	96	99.510	ENSECAG00000024544	SF1	97	99.433	Equus_caballus
ENSPCOG00000027546	SF1	83	98.870	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSPCOG00000027546	SF1	88	81.217	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSPCOG00000027546	SF1	100	99.843	ENSFCAG00000012231	SF1	100	99.843	Felis_catus
ENSPCOG00000027546	SF1	93	99.748	ENSFDAG00000009833	SF1	99	90.439	Fukomys_damarensis
ENSPCOG00000027546	SF1	91	79.949	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSPCOG00000027546	SF1	79	87.683	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSPCOG00000027546	SF1	91	83.679	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSPCOG00000027546	SF1	92	79.798	ENSGACG00000000826	sf1	67	78.750	Gasterosteus_aculeatus
ENSPCOG00000027546	SF1	88	92.432	ENSGAGG00000021691	SF1	72	85.687	Gopherus_agassizii
ENSPCOG00000027546	SF1	89	82.677	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSPCOG00000027546	SF1	100	99.687	ENSHGLG00000009541	SF1	100	99.687	Heterocephalus_glaber_female
ENSPCOG00000027546	SF1	96	86.085	ENSHGLG00100008255	-	94	86.555	Heterocephalus_glaber_male
ENSPCOG00000027546	SF1	93	99.748	ENSHGLG00100013879	-	99	88.206	Heterocephalus_glaber_male
ENSPCOG00000027546	SF1	88	88.204	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSPCOG00000027546	SF1	89	80.879	ENSHCOG00000011388	sf1	59	75.787	Hippocampus_comes
ENSPCOG00000027546	SF1	98	99.841	ENSSTOG00000009790	-	100	99.841	Ictidomys_tridecemlineatus
ENSPCOG00000027546	SF1	91	89.637	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSPCOG00000027546	SF1	100	99.687	ENSJJAG00000011788	Sf1	100	99.687	Jaculus_jaculus
ENSPCOG00000027546	SF1	91	81.633	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSPCOG00000027546	SF1	89	81.984	ENSLBEG00000019836	sf1	64	78.043	Labrus_bergylta
ENSPCOG00000027546	SF1	90	80.840	ENSLACG00000018493	SF1	86	69.590	Latimeria_chalumnae
ENSPCOG00000027546	SF1	88	85.067	ENSLOCG00000002130	sf1	57	84.718	Lepisosteus_oculatus
ENSPCOG00000027546	SF1	99	95.814	ENSLAFG00000007201	SF1	100	95.814	Loxodonta_africana
ENSPCOG00000027546	SF1	100	99.844	ENSMFAG00000033122	SF1	100	99.844	Macaca_fascicularis
ENSPCOG00000027546	SF1	100	99.843	ENSMMUG00000022606	SF1	100	99.843	Macaca_mulatta
ENSPCOG00000027546	SF1	100	99.844	ENSMNEG00000037901	SF1	100	99.844	Macaca_nemestrina
ENSPCOG00000027546	SF1	100	98.091	ENSMLEG00000040706	SF1	100	98.091	Mandrillus_leucophaeus
ENSPCOG00000027546	SF1	90	80.720	ENSMAMG00000001780	sf1	59	77.482	Mastacembelus_armatus
ENSPCOG00000027546	SF1	89	82.415	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSPCOG00000027546	SF1	100	99.060	ENSMAUG00000014064	Sf1	100	99.060	Mesocricetus_auratus
ENSPCOG00000027546	SF1	100	100.000	ENSMICG00000001202	SF1	100	100.000	Microcebus_murinus
ENSPCOG00000027546	SF1	100	99.060	ENSMOCG00000022038	Sf1	100	99.060	Microtus_ochrogaster
ENSPCOG00000027546	SF1	88	81.501	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSPCOG00000027546	SF1	94	98.246	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSPCOG00000027546	SF1	89	82.667	ENSMALG00000020521	sf1	69	75.887	Monopterus_albus
ENSPCOG00000027546	SF1	100	99.218	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSPCOG00000027546	SF1	100	99.218	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSPCOG00000027546	SF1	100	99.218	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSPCOG00000027546	SF1	100	99.218	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSPCOG00000027546	SF1	100	98.592	ENSMPUG00000012684	SF1	100	98.592	Mustela_putorius_furo
ENSPCOG00000027546	SF1	99	99.525	ENSMLUG00000015217	-	99	99.525	Myotis_lucifugus
ENSPCOG00000027546	SF1	96	95.343	ENSMLUG00000029800	-	90	89.313	Myotis_lucifugus
ENSPCOG00000027546	SF1	100	99.530	ENSNGAG00000005550	Sf1	100	99.530	Nannospalax_galili
ENSPCOG00000027546	SF1	88	84.054	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSPCOG00000027546	SF1	100	99.687	ENSNLEG00000005236	-	100	99.687	Nomascus_leucogenys
ENSPCOG00000027546	SF1	92	98.465	ENSMEUG00000013424	SF1	97	98.246	Notamacropus_eugenii
ENSPCOG00000027546	SF1	95	95.127	ENSOPRG00000005008	SF1	96	99.158	Ochotona_princeps
ENSPCOG00000027546	SF1	96	97.059	ENSODEG00000006102	-	100	92.462	Octodon_degus
ENSPCOG00000027546	SF1	89	82.677	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSPCOG00000027546	SF1	80	88.354	ENSOANG00000002909	SF1	97	87.563	Ornithorhynchus_anatinus
ENSPCOG00000027546	SF1	99	99.683	ENSOCUG00000026486	SF1	100	99.683	Oryctolagus_cuniculus
ENSPCOG00000027546	SF1	90	80.102	ENSORLG00000011853	sf1	73	69.460	Oryzias_latipes
ENSPCOG00000027546	SF1	92	79.052	ENSORLG00020011834	sf1	75	68.498	Oryzias_latipes_hni
ENSPCOG00000027546	SF1	89	80.366	ENSORLG00015012855	sf1	73	69.088	Oryzias_latipes_hsok
ENSPCOG00000027546	SF1	91	80.051	ENSOMEG00000005210	sf1	60	77.458	Oryzias_melastigma
ENSPCOG00000027546	SF1	100	100.000	ENSOGAG00000016196	SF1	100	100.000	Otolemur_garnettii
ENSPCOG00000027546	SF1	96	99.755	ENSOARG00000009166	SF1	97	95.126	Ovis_aries
ENSPCOG00000027546	SF1	99	99.045	ENSPPAG00000002799	-	100	99.837	Pan_paniscus
ENSPCOG00000027546	SF1	98	99.841	ENSPPRG00000013566	SF1	100	99.837	Panthera_pardus
ENSPCOG00000027546	SF1	95	99.010	ENSPTIG00000016141	SF1	91	100.000	Panthera_tigris_altaica
ENSPCOG00000027546	SF1	100	99.843	ENSPTRG00000003846	SF1	100	99.843	Pan_troglodytes
ENSPCOG00000027546	SF1	100	99.761	ENSPANG00000020754	SF1	100	99.761	Papio_anubis
ENSPCOG00000027546	SF1	77	79.341	ENSPKIG00000012116	sf1	89	73.563	Paramormyrops_kingsleyae
ENSPCOG00000027546	SF1	71	86.932	ENSPSIG00000003610	SF1	97	74.853	Pelodiscus_sinensis
ENSPCOG00000027546	SF1	100	99.216	ENSPEMG00000010463	Sf1	100	99.216	Peromyscus_maniculatus_bairdii
ENSPCOG00000027546	SF1	80	72.485	ENSPMAG00000008272	sf1	53	67.297	Petromyzon_marinus
ENSPCOG00000027546	SF1	100	98.748	ENSPCIG00000018173	SF1	100	98.748	Phascolarctos_cinereus
ENSPCOG00000027546	SF1	91	85.526	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSPCOG00000027546	SF1	88	83.641	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSPCOG00000027546	SF1	88	83.641	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSPCOG00000027546	SF1	90	82.078	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSPCOG00000027546	SF1	100	99.687	ENSPPYG00000003098	-	100	99.687	Pongo_abelii
ENSPCOG00000027546	SF1	94	98.995	ENSPCAG00000013631	SF1	78	97.909	Procavia_capensis
ENSPCOG00000027546	SF1	94	98.995	ENSPVAG00000016938	SF1	79	97.909	Pteropus_vampyrus
ENSPCOG00000027546	SF1	89	82.415	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSPCOG00000027546	SF1	89	84.960	ENSPNAG00000013072	sf1	59	79.612	Pygocentrus_nattereri
ENSPCOG00000027546	SF1	100	99.218	ENSRNOG00000021085	Sf1	100	99.218	Rattus_norvegicus
ENSPCOG00000027546	SF1	100	95.775	ENSRBIG00000042818	SF1	100	95.775	Rhinopithecus_bieti
ENSPCOG00000027546	SF1	100	97.852	ENSRROG00000045655	SF1	100	97.852	Rhinopithecus_roxellana
ENSPCOG00000027546	SF1	86	38.725	YLR116W	MSL5	61	43.366	Saccharomyces_cerevisiae
ENSPCOG00000027546	SF1	99	80.622	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSPCOG00000027546	SF1	96	91.727	ENSSHAG00000006841	SF1	77	91.253	Sarcophilus_harrisii
ENSPCOG00000027546	SF1	93	80.250	ENSSFOG00015021978	sf1	58	77.670	Scleropages_formosus
ENSPCOG00000027546	SF1	94	77.108	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSPCOG00000027546	SF1	90	80.000	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSPCOG00000027546	SF1	90	80.000	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSPCOG00000027546	SF1	93	94.710	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSPCOG00000027546	SF1	85	92.157	ENSSPUG00000012907	SF1	86	81.226	Sphenodon_punctatus
ENSPCOG00000027546	SF1	90	80.463	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSPCOG00000027546	SF1	100	99.687	ENSSSCG00000013021	SF1	100	99.687	Sus_scrofa
ENSPCOG00000027546	SF1	94	71.921	ENSTNIG00000004820	sf1	99	62.477	Tetraodon_nigroviridis
ENSPCOG00000027546	SF1	93	91.688	ENSTBEG00000013133	SF1	79	98.876	Tupaia_belangeri
ENSPCOG00000027546	SF1	93	93.955	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSPCOG00000027546	SF1	82	96.947	ENSUAMG00000011977	SF1	100	96.947	Ursus_americanus
ENSPCOG00000027546	SF1	96	98.526	ENSUMAG00000007268	SF1	90	98.864	Ursus_maritimus
ENSPCOG00000027546	SF1	71	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSPCOG00000027546	SF1	96	99.755	ENSVVUG00000028585	SF1	97	99.622	Vulpes_vulpes
ENSPCOG00000027546	SF1	99	79.625	ENSXETG00000008434	sf1	66	83.590	Xenopus_tropicalis
ENSPCOG00000027546	SF1	87	84.699	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSPCOG00000027546	SF1	89	82.895	ENSXMAG00000007822	sf1	62	78.947	Xiphophorus_maculatus