EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000027712 (Gene tree)
Gene ID: 105811713
Gene Symbol: -
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 25888 bases
Position: chrKQ021947.1:867962-893849
Accession: 105811713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000030001	RRM_1	PF00076.22	2.4e-27	1	2
ENSPCOP00000030001	RRM_1	PF00076.22	2.4e-27	2	2
ENSPCOP00000030003	RRM_1	PF00076.22	4.4e-26	1	2
ENSPCOP00000030003	RRM_1	PF00076.22	4.4e-26	2	2
ENSPCOP00000030004	RRM_1	PF00076.22	2e-16	1	1
ENSPCOP00000029999	RRM_1	PF00076.22	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000040949	-	885	XM_012645982	ENSPCOP00000030003	294 (aa)	XP_012501436	A0A2K6GUU2
ENSPCOT00000040950	-	765	-	ENSPCOP00000030004	254 (aa)	-	A0A2K6GUZ2
ENSPCOT00000040945	-	968	-	ENSPCOP00000029999	177 (aa)	-	A0A2K6GUY0
ENSPCOT00000040947	-	864	-	ENSPCOP00000030001	287 (aa)	-	A0A2K6GUR3

Gene Model

Click here to download ENSPCOG00000027712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000027712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000027712	-	77	30.469	ENSPCOG00000013271	TIA1	62	32.381
ENSPCOG00000027712	-	60	34.586	ENSPCOG00000018990	TIAL1	69	30.366
ENSPCOG00000027712	-	94	95.816	ENSPCOG00000023470	-	99	95.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000027712	-	100	99.652	ENSG00000180098	TRNAU1AP	100	99.652	Homo_sapiens
ENSPCOG00000027712	-	98	58.416	ENSAPOG00000007148	TRNAU1AP	98	58.416	Acanthochromis_polyacanthus
ENSPCOG00000027712	-	100	98.606	ENSAMEG00000011367	TRNAU1AP	100	98.606	Ailuropoda_melanoleuca
ENSPCOG00000027712	-	91	70.115	ENSACIG00000004161	trnau1apa	93	70.115	Amphilophus_citrinellus
ENSPCOG00000027712	-	98	58.416	ENSAOCG00000008056	trnau1apa	98	58.416	Amphiprion_ocellaris
ENSPCOG00000027712	-	98	58.416	ENSAPEG00000008868	trnau1apa	98	58.586	Amphiprion_percula
ENSPCOG00000027712	-	98	58.199	ENSATEG00000012140	trnau1apa	98	56.270	Anabas_testudineus
ENSPCOG00000027712	-	94	93.704	ENSAPLG00000002606	TRNAU1AP	99	93.704	Anas_platyrhynchos
ENSPCOG00000027712	-	99	50.000	ENSACAG00000004205	-	74	51.813	Anolis_carolinensis
ENSPCOG00000027712	-	99	76.224	ENSACAG00000003995	-	99	76.224	Anolis_carolinensis
ENSPCOG00000027712	-	100	99.652	ENSANAG00000018976	TRNAU1AP	100	99.652	Aotus_nancymaae
ENSPCOG00000027712	-	98	59.000	ENSACLG00000018515	trnau1apa	98	60.403	Astatotilapia_calliptera
ENSPCOG00000027712	-	99	56.055	ENSAMXG00000013750	trnau1apa	94	56.055	Astyanax_mexicanus
ENSPCOG00000027712	-	95	65.556	ENSAMXG00000029240	-	98	65.556	Astyanax_mexicanus
ENSPCOG00000027712	-	100	99.303	ENSBTAG00000010393	TRNAU1AP	100	99.303	Bos_taurus
ENSPCOG00000027712	-	100	99.652	ENSCJAG00000009717	TRNAU1AP	100	99.652	Callithrix_jacchus
ENSPCOG00000027712	-	100	99.303	ENSCAFG00000011735	TRNAU1AP	100	99.303	Canis_familiaris
ENSPCOG00000027712	-	100	99.303	ENSCAFG00020023584	TRNAU1AP	100	99.303	Canis_lupus_dingo
ENSPCOG00000027712	-	100	98.955	ENSCHIG00000023215	TRNAU1AP	100	98.955	Capra_hircus
ENSPCOG00000027712	-	100	99.303	ENSTSYG00000003506	TRNAU1AP	100	99.303	Carlito_syrichta
ENSPCOG00000027712	-	100	98.955	ENSCPOG00000001925	TRNAU1AP	100	98.955	Cavia_porcellus
ENSPCOG00000027712	-	100	99.652	ENSCCAG00000037506	TRNAU1AP	100	99.652	Cebus_capucinus
ENSPCOG00000027712	-	100	99.303	ENSCATG00000044617	TRNAU1AP	100	99.303	Cercocebus_atys
ENSPCOG00000027712	-	100	98.955	ENSCLAG00000008223	TRNAU1AP	100	98.955	Chinchilla_lanigera
ENSPCOG00000027712	-	100	99.303	ENSCSAG00000001014	TRNAU1AP	100	99.303	Chlorocebus_sabaeus
ENSPCOG00000027712	-	100	93.785	ENSCPBG00000000121	TRNAU1AP	100	94.526	Chrysemys_picta_bellii
ENSPCOG00000027712	-	99	37.500	ENSCSAVG00000011781	-	98	44.681	Ciona_savignyi
ENSPCOG00000027712	-	100	99.435	ENSCANG00000041949	TRNAU1AP	100	99.435	Colobus_angolensis_palliatus
ENSPCOG00000027712	-	100	98.955	ENSCGRG00001004713	Trnau1ap	100	98.955	Cricetulus_griseus_chok1gshd
ENSPCOG00000027712	-	100	98.955	ENSCGRG00000014532	Trnau1ap	100	98.955	Cricetulus_griseus_crigri
ENSPCOG00000027712	-	98	58.333	ENSCSEG00000006663	trnau1apa	95	56.954	Cynoglossus_semilaevis
ENSPCOG00000027712	-	97	57.823	ENSCVAG00000018069	trnau1apa	94	59.341	Cyprinodon_variegatus
ENSPCOG00000027712	-	95	53.571	ENSDARG00000101323	trnau1apa	88	51.957	Danio_rerio
ENSPCOG00000027712	-	67	77.604	ENSDNOG00000047959	-	97	78.075	Dasypus_novemcinctus
ENSPCOG00000027712	-	100	100.000	ENSDNOG00000033009	TRNAU1AP	100	100.000	Dasypus_novemcinctus
ENSPCOG00000027712	-	99	91.608	ENSDORG00000006349	Trnau1ap	100	100.000	Dipodomys_ordii
ENSPCOG00000027712	-	96	38.344	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSPCOG00000027712	-	100	92.090	ENSETEG00000012594	TRNAU1AP	100	94.286	Echinops_telfairi
ENSPCOG00000027712	-	55	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSPCOG00000027712	-	100	99.652	ENSEASG00005010062	TRNAU1AP	100	99.652	Equus_asinus_asinus
ENSPCOG00000027712	-	100	99.652	ENSECAG00000012980	TRNAU1AP	100	99.652	Equus_caballus
ENSPCOG00000027712	-	96	63.066	ENSELUG00000017686	trnau1apa	94	62.718	Esox_lucius
ENSPCOG00000027712	-	96	70.526	ENSELUG00000022790	-	94	52.889	Esox_lucius
ENSPCOG00000027712	-	100	99.652	ENSFCAG00000013401	TRNAU1AP	100	99.652	Felis_catus
ENSPCOG00000027712	-	100	92.655	ENSFALG00000001371	TRNAU1AP	100	94.161	Ficedula_albicollis
ENSPCOG00000027712	-	100	98.955	ENSFDAG00000018599	TRNAU1AP	100	98.955	Fukomys_damarensis
ENSPCOG00000027712	-	79	60.816	ENSFHEG00000018232	trnau1apa	86	56.757	Fundulus_heteroclitus
ENSPCOG00000027712	-	95	53.846	ENSGMOG00000016508	trnau1apa	93	54.930	Gadus_morhua
ENSPCOG00000027712	-	99	47.692	ENSGALG00000012721	C2H6orf52	95	44.788	Gallus_gallus
ENSPCOG00000027712	-	100	93.031	ENSGALG00000001310	-	100	93.031	Gallus_gallus
ENSPCOG00000027712	-	78	58.403	ENSGAFG00000004928	trnau1apa	90	59.244	Gambusia_affinis
ENSPCOG00000027712	-	98	60.274	ENSGACG00000001443	trnau1apa	95	59.932	Gasterosteus_aculeatus
ENSPCOG00000027712	-	100	94.350	ENSGAGG00000004940	TRNAU1AP	100	94.891	Gopherus_agassizii
ENSPCOG00000027712	-	100	99.652	ENSGGOG00000003511	TRNAU1AP	100	99.652	Gorilla_gorilla
ENSPCOG00000027712	-	98	58.033	ENSHBUG00000002510	trnau1apa	98	59.406	Haplochromis_burtoni
ENSPCOG00000027712	-	100	98.955	ENSHGLG00000010380	TRNAU1AP	100	98.955	Heterocephalus_glaber_female
ENSPCOG00000027712	-	100	98.870	ENSHGLG00100012699	TRNAU1AP	100	96.516	Heterocephalus_glaber_male
ENSPCOG00000027712	-	99	58.086	ENSHCOG00000014770	trnau1apa	96	64.748	Hippocampus_comes
ENSPCOG00000027712	-	100	99.652	ENSSTOG00000000079	TRNAU1AP	100	99.652	Ictidomys_tridecemlineatus
ENSPCOG00000027712	-	100	98.606	ENSJJAG00000010128	Trnau1ap	100	98.606	Jaculus_jaculus
ENSPCOG00000027712	-	95	60.208	ENSKMAG00000001230	trnau1apa	93	58.478	Kryptolebias_marmoratus
ENSPCOG00000027712	-	95	60.751	ENSLBEG00000011683	trnau1apa	93	59.864	Labrus_bergylta
ENSPCOG00000027712	-	100	77.966	ENSLACG00000005541	TRNAU1AP	99	72.632	Latimeria_chalumnae
ENSPCOG00000027712	-	99	72.028	ENSLOCG00000004041	trnau1apa	99	70.979	Lepisosteus_oculatus
ENSPCOG00000027712	-	100	99.435	ENSLAFG00000007628	TRNAU1AP	100	99.303	Loxodonta_africana
ENSPCOG00000027712	-	100	99.303	ENSMFAG00000043751	TRNAU1AP	100	99.303	Macaca_fascicularis
ENSPCOG00000027712	-	100	99.303	ENSMMUG00000006561	TRNAU1AP	100	99.303	Macaca_mulatta
ENSPCOG00000027712	-	100	99.303	ENSMNEG00000044201	TRNAU1AP	100	99.303	Macaca_nemestrina
ENSPCOG00000027712	-	100	99.303	ENSMLEG00000015649	TRNAU1AP	100	99.303	Mandrillus_leucophaeus
ENSPCOG00000027712	-	98	58.958	ENSMAMG00000001247	trnau1apa	98	58.824	Mastacembelus_armatus
ENSPCOG00000027712	-	98	59.000	ENSMZEG00005017722	trnau1apa	98	60.403	Maylandia_zebra
ENSPCOG00000027712	-	100	90.960	ENSMGAG00000002105	TRNAU1AP	100	92.806	Meleagris_gallopavo
ENSPCOG00000027712	-	100	100.000	ENSMICG00000008386	TRNAU1AP	100	100.000	Microcebus_murinus
ENSPCOG00000027712	-	100	99.303	ENSMOCG00000011189	Trnau1ap	100	99.303	Microtus_ochrogaster
ENSPCOG00000027712	-	95	58.088	ENSMMOG00000012107	trnau1apa	92	58.088	Mola_mola
ENSPCOG00000027712	-	100	95.819	ENSMODG00000010927	TRNAU1AP	100	95.819	Monodelphis_domestica
ENSPCOG00000027712	-	96	61.092	ENSMALG00000016778	trnau1apa	94	58.362	Monopterus_albus
ENSPCOG00000027712	-	100	98.606	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSPCOG00000027712	-	100	98.606	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSPCOG00000027712	-	100	98.955	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSPCOG00000027712	-	100	98.955	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSPCOG00000027712	-	100	98.955	ENSMPUG00000015511	TRNAU1AP	100	98.955	Mustela_putorius_furo
ENSPCOG00000027712	-	100	100.000	ENSMLUG00000012586	TRNAU1AP	100	100.000	Myotis_lucifugus
ENSPCOG00000027712	-	100	97.909	ENSNGAG00000015881	Trnau1ap	100	97.909	Nannospalax_galili
ENSPCOG00000027712	-	99	56.997	ENSNBRG00000001758	trnau1apa	98	56.997	Neolamprologus_brichardi
ENSPCOG00000027712	-	100	99.652	ENSNLEG00000009822	TRNAU1AP	100	99.652	Nomascus_leucogenys
ENSPCOG00000027712	-	100	93.220	ENSMEUG00000006117	TRNAU1AP	100	94.604	Notamacropus_eugenii
ENSPCOG00000027712	-	80	99.091	ENSOPRG00000007084	-	69	99.091	Ochotona_princeps
ENSPCOG00000027712	-	100	99.303	ENSODEG00000002970	TRNAU1AP	100	99.303	Octodon_degus
ENSPCOG00000027712	-	80	59.671	ENSONIG00000004715	trnau1apa	96	60.082	Oreochromis_niloticus
ENSPCOG00000027712	-	98	78.286	ENSOANG00000005325	-	99	74.476	Ornithorhynchus_anatinus
ENSPCOG00000027712	-	89	77.344	ENSOCUG00000006834	-	100	75.391	Oryctolagus_cuniculus
ENSPCOG00000027712	-	100	98.305	ENSOCUG00000011704	-	100	97.561	Oryctolagus_cuniculus
ENSPCOG00000027712	-	100	77.431	ENSOCUG00000002353	-	100	77.431	Oryctolagus_cuniculus
ENSPCOG00000027712	-	98	58.865	ENSORLG00000010428	trnau1apa	95	57.042	Oryzias_latipes
ENSPCOG00000027712	-	98	58.020	ENSORLG00020000926	trnau1ap	95	56.849	Oryzias_latipes_hni
ENSPCOG00000027712	-	98	58.020	ENSORLG00015009858	trnau1ap	95	56.849	Oryzias_latipes_hsok
ENSPCOG00000027712	-	98	59.044	ENSOMEG00000007873	trnau1apa	95	56.164	Oryzias_melastigma
ENSPCOG00000027712	-	100	99.652	ENSOGAG00000002274	TRNAU1AP	100	99.652	Otolemur_garnettii
ENSPCOG00000027712	-	100	98.955	ENSOARG00000002843	TRNAU1AP	100	98.955	Ovis_aries
ENSPCOG00000027712	-	100	99.652	ENSPPAG00000033927	TRNAU1AP	100	99.652	Pan_paniscus
ENSPCOG00000027712	-	100	99.652	ENSPPRG00000004416	TRNAU1AP	100	99.652	Panthera_pardus
ENSPCOG00000027712	-	100	99.652	ENSPTIG00000016677	TRNAU1AP	100	99.652	Panthera_tigris_altaica
ENSPCOG00000027712	-	100	73.889	ENSPTRG00000000434	-	97	79.336	Pan_troglodytes
ENSPCOG00000027712	-	100	99.303	ENSPANG00000016019	TRNAU1AP	100	99.303	Papio_anubis
ENSPCOG00000027712	-	95	59.717	ENSPKIG00000015511	trnau1apa	92	57.951	Paramormyrops_kingsleyae
ENSPCOG00000027712	-	94	74.468	ENSPKIG00000022205	-	93	77.528	Paramormyrops_kingsleyae
ENSPCOG00000027712	-	100	93.785	ENSPSIG00000006864	TRNAU1AP	100	94.891	Pelodiscus_sinensis
ENSPCOG00000027712	-	94	61.397	ENSPMGG00000023893	trnau1apa	91	60.517	Periophthalmus_magnuspinnatus
ENSPCOG00000027712	-	100	98.606	ENSPEMG00000007877	Trnau1ap	100	98.606	Peromyscus_maniculatus_bairdii
ENSPCOG00000027712	-	78	60.987	ENSPMAG00000005934	trnau1apa	96	60.369	Petromyzon_marinus
ENSPCOG00000027712	-	60	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSPCOG00000027712	-	95	56.944	ENSPFOG00000008100	trnau1apa	93	57.639	Poecilia_formosa
ENSPCOG00000027712	-	91	56.679	ENSPLAG00000010236	trnau1apa	93	57.401	Poecilia_latipinna
ENSPCOG00000027712	-	96	55.862	ENSPMEG00000016387	trnau1apa	92	56.552	Poecilia_mexicana
ENSPCOG00000027712	-	93	53.903	ENSPREG00000019821	trnau1apa	86	66.265	Poecilia_reticulata
ENSPCOG00000027712	-	85	99.537	ENSPPYG00000001639	-	96	99.537	Pongo_abelii
ENSPCOG00000027712	-	100	99.652	ENSPVAG00000017214	TRNAU1AP	100	99.652	Pteropus_vampyrus
ENSPCOG00000027712	-	98	58.033	ENSPNYG00000010130	trnau1apa	81	77.778	Pundamilia_nyererei
ENSPCOG00000027712	-	99	53.020	ENSPNAG00000024905	trnau1apa	95	51.370	Pygocentrus_nattereri
ENSPCOG00000027712	-	94	90.775	ENSRNOG00000055344	Trnau1ap	92	90.775	Rattus_norvegicus
ENSPCOG00000027712	-	100	99.652	ENSRBIG00000029083	TRNAU1AP	100	99.652	Rhinopithecus_bieti
ENSPCOG00000027712	-	100	99.652	ENSRROG00000029128	TRNAU1AP	100	99.652	Rhinopithecus_roxellana
ENSPCOG00000027712	-	100	99.652	ENSSBOG00000021299	TRNAU1AP	100	99.652	Saimiri_boliviensis_boliviensis
ENSPCOG00000027712	-	100	95.122	ENSSHAG00000008108	TRNAU1AP	100	95.122	Sarcophilus_harrisii
ENSPCOG00000027712	-	98	53.722	ENSSMAG00000020851	trnau1apa	98	57.049	Scophthalmus_maximus
ENSPCOG00000027712	-	96	58.844	ENSSDUG00000011734	trnau1apa	94	57.483	Seriola_dumerili
ENSPCOG00000027712	-	92	59.829	ENSSLDG00000012101	trnau1apa	92	59.829	Seriola_lalandi_dorsalis
ENSPCOG00000027712	-	100	98.305	ENSSARG00000007536	TRNAU1AP	100	98.201	Sorex_araneus
ENSPCOG00000027712	-	99	81.818	ENSSPUG00000010415	-	100	81.818	Sphenodon_punctatus
ENSPCOG00000027712	-	99	86.014	ENSSPUG00000010400	-	100	86.014	Sphenodon_punctatus
ENSPCOG00000027712	-	98	57.980	ENSSPAG00000005029	trnau1apa	98	57.980	Stegastes_partitus
ENSPCOG00000027712	-	100	99.652	ENSSSCG00000030284	TRNAU1AP	100	99.652	Sus_scrofa
ENSPCOG00000027712	-	100	93.220	ENSTGUG00000000735	-	100	94.604	Taeniopygia_guttata
ENSPCOG00000027712	-	99	51.685	ENSTGUG00000005908	-	100	53.061	Taeniopygia_guttata
ENSPCOG00000027712	-	98	59.136	ENSTRUG00000003352	trnau1apa	98	58.472	Takifugu_rubripes
ENSPCOG00000027712	-	98	57.096	ENSTNIG00000006129	trnau1apa	98	57.096	Tetraodon_nigroviridis
ENSPCOG00000027712	-	100	93.220	ENSTBEG00000008049	-	100	87.755	Tupaia_belangeri
ENSPCOG00000027712	-	100	100.000	ENSTTRG00000001854	TRNAU1AP	100	100.000	Tursiops_truncatus
ENSPCOG00000027712	-	100	98.870	ENSUAMG00000008789	TRNAU1AP	100	99.270	Ursus_americanus
ENSPCOG00000027712	-	100	98.955	ENSUMAG00000011068	TRNAU1AP	100	98.955	Ursus_maritimus
ENSPCOG00000027712	-	100	99.435	ENSVPAG00000006778	TRNAU1AP	100	88.699	Vicugna_pacos
ENSPCOG00000027712	-	100	98.870	ENSVVUG00000012518	TRNAU1AP	93	98.592	Vulpes_vulpes
ENSPCOG00000027712	-	95	55.903	ENSXMAG00000017361	trnau1apa	93	57.639	Xiphophorus_maculatus