EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000027888 (Gene tree)
Gene ID: 105822427
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 60131 bases
Position: chrKQ014984.1:2317621-2377751
Accession: 105822427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000030343	Rif1_N	PF12231.8	1.9e-77	1	1
ENSPCOP00000030344	Rif1_N	PF12231.8	1.9e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000041292	RIF1-202	8711	XM_012659407	ENSPCOP00000030344	2476 (aa)	XP_012514861	A0A2K6GVY2
ENSPCOT00000041291	RIF1-201	9959	XM_012659415	ENSPCOP00000030343	2450 (aa)	XP_012514869	A0A2K6GVT0

Gene Model

Click here to download ENSPCOG00000027888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000027888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000027888	RIF1	100	84.556	ENSG00000080345	RIF1	97	91.119	Homo_sapiens
ENSPCOG00000027888	RIF1	99	82.031	ENSAMEG00000008461	RIF1	100	81.789	Ailuropoda_melanoleuca
ENSPCOG00000027888	RIF1	64	50.747	ENSACIG00000017765	rif1	64	54.178	Amphilophus_citrinellus
ENSPCOG00000027888	RIF1	63	49.088	ENSAOCG00000017231	rif1	64	48.583	Amphiprion_ocellaris
ENSPCOG00000027888	RIF1	70	47.806	ENSATEG00000022887	rif1	73	47.267	Anabas_testudineus
ENSPCOG00000027888	RIF1	84	65.625	ENSAPLG00000007092	RIF1	92	65.625	Anas_platyrhynchos
ENSPCOG00000027888	RIF1	84	57.714	ENSACAG00000003714	RIF1	90	57.714	Anolis_carolinensis
ENSPCOG00000027888	RIF1	100	83.743	ENSANAG00000024840	RIF1	100	83.743	Aotus_nancymaae
ENSPCOG00000027888	RIF1	64	45.352	ENSAMXG00000010910	rif1	52	50.962	Astyanax_mexicanus
ENSPCOG00000027888	RIF1	94	81.038	ENSBTAG00000021020	RIF1	100	81.038	Bos_taurus
ENSPCOG00000027888	RIF1	100	82.977	ENSCJAG00000003138	RIF1	100	82.977	Callithrix_jacchus
ENSPCOG00000027888	RIF1	100	80.853	ENSCAFG00000005670	RIF1	97	81.094	Canis_familiaris
ENSPCOG00000027888	RIF1	100	79.863	ENSCAFG00020016401	RIF1	100	80.105	Canis_lupus_dingo
ENSPCOG00000027888	RIF1	100	80.507	ENSCHIG00000020327	RIF1	100	80.507	Capra_hircus
ENSPCOG00000027888	RIF1	99	81.048	ENSTSYG00000008861	RIF1	100	81.048	Carlito_syrichta
ENSPCOG00000027888	RIF1	79	83.721	ENSCAPG00000008957	RIF1	95	83.721	Cavia_aperea
ENSPCOG00000027888	RIF1	99	72.709	ENSCPOG00000037898	RIF1	99	72.669	Cavia_porcellus
ENSPCOG00000027888	RIF1	100	82.453	ENSCCAG00000024760	RIF1	100	82.453	Cebus_capucinus
ENSPCOG00000027888	RIF1	100	84.435	ENSCATG00000033353	RIF1	100	84.435	Cercocebus_atys
ENSPCOG00000027888	RIF1	96	75.564	ENSCLAG00000001517	RIF1	99	75.303	Chinchilla_lanigera
ENSPCOG00000027888	RIF1	100	84.395	ENSCSAG00000016089	RIF1	100	84.395	Chlorocebus_sabaeus
ENSPCOG00000027888	RIF1	97	76.522	ENSCHOG00000007187	RIF1	97	76.522	Choloepus_hoffmanni
ENSPCOG00000027888	RIF1	92	65.909	ENSCPBG00000025885	RIF1	99	66.835	Chrysemys_picta_bellii
ENSPCOG00000027888	RIF1	100	83.071	ENSCANG00000028962	RIF1	100	83.734	Colobus_angolensis_palliatus
ENSPCOG00000027888	RIF1	99	71.520	ENSCGRG00001024589	Rif1	100	71.520	Cricetulus_griseus_chok1gshd
ENSPCOG00000027888	RIF1	99	72.679	ENSCGRG00000010713	Rif1	100	72.679	Cricetulus_griseus_crigri
ENSPCOG00000027888	RIF1	61	58.515	ENSCSEG00000003945	rif1	65	58.515	Cynoglossus_semilaevis
ENSPCOG00000027888	RIF1	65	48.422	ENSCVAG00000022479	rif1	69	48.422	Cyprinodon_variegatus
ENSPCOG00000027888	RIF1	51	51.855	ENSDARG00000062650	rif1	52	51.697	Danio_rerio
ENSPCOG00000027888	RIF1	99	78.858	ENSDNOG00000011194	RIF1	97	78.858	Dasypus_novemcinctus
ENSPCOG00000027888	RIF1	94	72.369	ENSETEG00000012421	RIF1	92	72.067	Echinops_telfairi
ENSPCOG00000027888	RIF1	97	87.476	ENSEASG00005023434	RIF1	98	92.739	Equus_asinus_asinus
ENSPCOG00000027888	RIF1	97	90.347	ENSECAG00000012679	RIF1	100	90.347	Equus_caballus
ENSPCOG00000027888	RIF1	62	51.631	ENSELUG00000006826	rif1	56	50.718	Esox_lucius
ENSPCOG00000027888	RIF1	100	81.046	ENSFCAG00000029742	RIF1	100	81.046	Felis_catus
ENSPCOG00000027888	RIF1	79	61.517	ENSFALG00000013874	RIF1	92	62.079	Ficedula_albicollis
ENSPCOG00000027888	RIF1	99	77.035	ENSFDAG00000006538	RIF1	99	76.914	Fukomys_damarensis
ENSPCOG00000027888	RIF1	62	50.163	ENSFHEG00000013721	rif1	65	50.040	Fundulus_heteroclitus
ENSPCOG00000027888	RIF1	54	53.782	ENSGMOG00000003517	rif1	81	53.782	Gadus_morhua
ENSPCOG00000027888	RIF1	79	65.889	ENSGALG00000012484	RIF1	91	66.181	Gallus_gallus
ENSPCOG00000027888	RIF1	59	55.283	ENSGAFG00000017196	rif1	65	54.496	Gambusia_affinis
ENSPCOG00000027888	RIF1	60	55.285	ENSGACG00000008579	rif1	66	54.800	Gasterosteus_aculeatus
ENSPCOG00000027888	RIF1	85	72.455	ENSGAGG00000012595	RIF1	98	73.574	Gopherus_agassizii
ENSPCOG00000027888	RIF1	90	92.275	ENSGGOG00000040178	RIF1	96	92.407	Gorilla_gorilla
ENSPCOG00000027888	RIF1	51	50.935	ENSHBUG00000007125	rif1	55	50.584	Haplochromis_burtoni
ENSPCOG00000027888	RIF1	95	77.221	ENSHGLG00100009807	RIF1	99	77.031	Heterocephalus_glaber_male
ENSPCOG00000027888	RIF1	63	49.162	ENSHCOG00000015943	rif1	60	48.813	Hippocampus_comes
ENSPCOG00000027888	RIF1	50	52.674	ENSIPUG00000021703	rif1	50	52.205	Ictalurus_punctatus
ENSPCOG00000027888	RIF1	100	79.407	ENSSTOG00000020712	RIF1	100	79.367	Ictidomys_tridecemlineatus
ENSPCOG00000027888	RIF1	99	70.692	ENSJJAG00000023000	Rif1	100	70.733	Jaculus_jaculus
ENSPCOG00000027888	RIF1	63	49.960	ENSKMAG00000002852	rif1	67	49.880	Kryptolebias_marmoratus
ENSPCOG00000027888	RIF1	66	50.593	ENSLBEG00000023196	rif1	61	50.514	Labrus_bergylta
ENSPCOG00000027888	RIF1	85	63.582	ENSLACG00000005425	RIF1	89	63.582	Latimeria_chalumnae
ENSPCOG00000027888	RIF1	63	54.960	ENSLOCG00000002657	rif1	83	50.456	Lepisosteus_oculatus
ENSPCOG00000027888	RIF1	99	79.147	ENSLAFG00000009796	RIF1	100	79.147	Loxodonta_africana
ENSPCOG00000027888	RIF1	100	84.597	ENSMFAG00000032233	RIF1	100	84.597	Macaca_fascicularis
ENSPCOG00000027888	RIF1	100	84.556	ENSMMUG00000008611	RIF1	100	84.556	Macaca_mulatta
ENSPCOG00000027888	RIF1	100	84.476	ENSMNEG00000031616	RIF1	100	84.476	Macaca_nemestrina
ENSPCOG00000027888	RIF1	100	84.597	ENSMLEG00000042945	RIF1	100	84.597	Mandrillus_leucophaeus
ENSPCOG00000027888	RIF1	67	52.963	ENSMAMG00000001745	rif1	60	53.236	Mastacembelus_armatus
ENSPCOG00000027888	RIF1	72	51.221	ENSMZEG00005020920	rif1	78	50.866	Maylandia_zebra
ENSPCOG00000027888	RIF1	85	58.586	ENSMGAG00000012732	RIF1	93	58.838	Meleagris_gallopavo
ENSPCOG00000027888	RIF1	98	89.972	ENSMAUG00000013158	Rif1	100	89.972	Mesocricetus_auratus
ENSPCOG00000027888	RIF1	100	94.512	ENSMICG00000046127	RIF1	100	94.512	Microcebus_murinus
ENSPCOG00000027888	RIF1	99	71.164	ENSMOCG00000009381	Rif1	100	71.164	Microtus_ochrogaster
ENSPCOG00000027888	RIF1	62	50.162	ENSMMOG00000006519	rif1	63	50.162	Mola_mola
ENSPCOG00000027888	RIF1	100	60.716	ENSMODG00000003703	RIF1	100	60.605	Monodelphis_domestica
ENSPCOG00000027888	RIF1	58	52.273	ENSMALG00000016759	rif1	66	52.455	Monopterus_albus
ENSPCOG00000027888	RIF1	99	70.676	MGP_CAROLIEiJ_G0023555	Rif1	100	70.676	Mus_caroli
ENSPCOG00000027888	RIF1	99	70.942	ENSMUSG00000036202	Rif1	100	70.942	Mus_musculus
ENSPCOG00000027888	RIF1	99	69.618	MGP_PahariEiJ_G0025006	Rif1	100	69.618	Mus_pahari
ENSPCOG00000027888	RIF1	99	71.038	MGP_SPRETEiJ_G0024476	Rif1	100	71.090	Mus_spretus
ENSPCOG00000027888	RIF1	100	81.031	ENSMPUG00000000371	RIF1	100	81.031	Mustela_putorius_furo
ENSPCOG00000027888	RIF1	90	79.372	ENSMLUG00000003376	RIF1	100	79.372	Myotis_lucifugus
ENSPCOG00000027888	RIF1	100	74.658	ENSNGAG00000009268	Rif1	100	74.658	Nannospalax_galili
ENSPCOG00000027888	RIF1	71	50.925	ENSNBRG00000014257	rif1	74	49.922	Neolamprologus_brichardi
ENSPCOG00000027888	RIF1	100	83.813	ENSNLEG00000010955	RIF1	100	83.813	Nomascus_leucogenys
ENSPCOG00000027888	RIF1	80	80.000	ENSMEUG00000007601	-	87	80.000	Notamacropus_eugenii
ENSPCOG00000027888	RIF1	99	73.513	ENSODEG00000003950	RIF1	99	73.633	Octodon_degus
ENSPCOG00000027888	RIF1	54	60.465	ENSONIG00000013657	rif1	62	60.465	Oreochromis_niloticus
ENSPCOG00000027888	RIF1	93	68.978	ENSOANG00000006078	-	56	74.976	Ornithorhynchus_anatinus
ENSPCOG00000027888	RIF1	100	79.219	ENSOCUG00000017435	RIF1	100	79.026	Oryctolagus_cuniculus
ENSPCOG00000027888	RIF1	64	47.898	ENSORLG00020001302	rif1	70	48.166	Oryzias_latipes_hni
ENSPCOG00000027888	RIF1	62	47.930	ENSORLG00015000009	rif1	66	47.850	Oryzias_latipes_hsok
ENSPCOG00000027888	RIF1	70	49.032	ENSOMEG00000021513	rif1	79	48.295	Oryzias_melastigma
ENSPCOG00000027888	RIF1	99	85.674	ENSOGAG00000006141	RIF1	99	85.553	Otolemur_garnettii
ENSPCOG00000027888	RIF1	100	80.749	ENSOARG00000008930	RIF1	100	80.749	Ovis_aries
ENSPCOG00000027888	RIF1	100	84.556	ENSPPAG00000023754	RIF1	100	84.556	Pan_paniscus
ENSPCOG00000027888	RIF1	100	81.087	ENSPPRG00000003618	RIF1	100	81.087	Panthera_pardus
ENSPCOG00000027888	RIF1	100	81.127	ENSPTIG00000020652	RIF1	100	81.127	Panthera_tigris_altaica
ENSPCOG00000027888	RIF1	100	84.677	ENSPTRG00000012534	RIF1	100	84.677	Pan_troglodytes
ENSPCOG00000027888	RIF1	100	84.274	ENSPANG00000008525	RIF1	100	84.274	Papio_anubis
ENSPCOG00000027888	RIF1	62	52.016	ENSPKIG00000004267	rif1	69	52.122	Paramormyrops_kingsleyae
ENSPCOG00000027888	RIF1	62	46.497	ENSPMGG00000016141	rif1	75	46.497	Periophthalmus_magnuspinnatus
ENSPCOG00000027888	RIF1	99	72.969	ENSPEMG00000000446	Rif1	99	72.724	Peromyscus_maniculatus_bairdii
ENSPCOG00000027888	RIF1	99	60.352	ENSPCIG00000009185	RIF1	99	60.072	Phascolarctos_cinereus
ENSPCOG00000027888	RIF1	56	52.074	ENSPFOG00000000554	-	63	52.074	Poecilia_formosa
ENSPCOG00000027888	RIF1	62	52.212	ENSPFOG00000017804	rif1	65	52.293	Poecilia_formosa
ENSPCOG00000027888	RIF1	63	51.595	ENSPLAG00000017945	rif1	69	51.595	Poecilia_latipinna
ENSPCOG00000027888	RIF1	53	50.392	ENSPMEG00000006897	-	62	50.392	Poecilia_mexicana
ENSPCOG00000027888	RIF1	63	51.354	ENSPREG00000018052	rif1	64	54.777	Poecilia_reticulata
ENSPCOG00000027888	RIF1	100	84.712	ENSPPYG00000012846	RIF1	100	84.712	Pongo_abelii
ENSPCOG00000027888	RIF1	83	83.333	ENSPCAG00000009032	RIF1	83	83.333	Procavia_capensis
ENSPCOG00000027888	RIF1	93	88.057	ENSPVAG00000014276	RIF1	95	88.057	Pteropus_vampyrus
ENSPCOG00000027888	RIF1	63	49.052	ENSPNYG00000012940	rif1	69	48.819	Pundamilia_nyererei
ENSPCOG00000027888	RIF1	65	52.460	ENSPNAG00000016685	rif1	52	52.242	Pygocentrus_nattereri
ENSPCOG00000027888	RIF1	99	69.703	ENSRNOG00000054901	Rif1	100	69.543	Rattus_norvegicus
ENSPCOG00000027888	RIF1	100	83.831	ENSRBIG00000003704	RIF1	100	83.831	Rhinopithecus_bieti
ENSPCOG00000027888	RIF1	100	84.758	ENSRROG00000028206	RIF1	100	84.758	Rhinopithecus_roxellana
ENSPCOG00000027888	RIF1	97	96.774	ENSSBOG00000029530	RIF1	100	96.774	Saimiri_boliviensis_boliviensis
ENSPCOG00000027888	RIF1	99	60.690	ENSSHAG00000018552	RIF1	99	60.623	Sarcophilus_harrisii
ENSPCOG00000027888	RIF1	50	54.082	ENSSFOG00015021539	rif1	79	53.215	Scleropages_formosus
ENSPCOG00000027888	RIF1	64	49.451	ENSSMAG00000011704	rif1	62	49.298	Scophthalmus_maximus
ENSPCOG00000027888	RIF1	62	51.102	ENSSDUG00000015632	rif1	70	49.697	Seriola_dumerili
ENSPCOG00000027888	RIF1	62	51.167	ENSSLDG00000019531	rif1	67	49.209	Seriola_lalandi_dorsalis
ENSPCOG00000027888	RIF1	61	86.102	ENSSARG00000007161	-	62	86.102	Sorex_araneus
ENSPCOG00000027888	RIF1	88	58.193	ENSSPUG00000003062	RIF1	94	60.599	Sphenodon_punctatus
ENSPCOG00000027888	RIF1	100	81.587	ENSSSCG00000016395	RIF1	100	81.587	Sus_scrofa
ENSPCOG00000027888	RIF1	68	49.960	ENSTRUG00000015808	rif1	75	48.991	Takifugu_rubripes
ENSPCOG00000027888	RIF1	65	51.057	ENSTNIG00000011538	rif1	69	51.057	Tetraodon_nigroviridis
ENSPCOG00000027888	RIF1	83	91.772	ENSTBEG00000016082	RIF1	82	91.772	Tupaia_belangeri
ENSPCOG00000027888	RIF1	100	82.777	ENSTTRG00000011190	RIF1	100	82.777	Tursiops_truncatus
ENSPCOG00000027888	RIF1	90	81.587	ENSUAMG00000026385	RIF1	99	81.320	Ursus_americanus
ENSPCOG00000027888	RIF1	100	82.441	ENSUMAG00000000337	RIF1	100	82.199	Ursus_maritimus
ENSPCOG00000027888	RIF1	100	80.193	ENSVPAG00000002162	RIF1	100	80.233	Vicugna_pacos
ENSPCOG00000027888	RIF1	100	80.346	ENSVVUG00000011293	RIF1	100	80.346	Vulpes_vulpes
ENSPCOG00000027888	RIF1	99	43.833	ENSXETG00000004530	rif1	70	46.064	Xenopus_tropicalis
ENSPCOG00000027888	RIF1	63	48.287	ENSXMAG00000000506	rif1	64	48.367	Xiphophorus_maculatus