EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000028489 (Gene tree)
Gene ID: 105823894
Gene Symbol: ARL5C
Alias: ARL12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 5302 bases
Position: chrKQ015092.1:4678848-4684149
Accession: 105823894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000031420	MMR_HSR1	PF01926.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000042375	ARL5C-201	1206	XM_012661192	ENSPCOP00000031420	179 (aa)	XP_012516646	A0A2K6GYZ9

Gene Model

Click here to download ENSPCOG00000028489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000028489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000028489	ARL5C	86	36.250	ENSPCOG00000006201	ARL4D	80	36.250
ENSPCOG00000028489	ARL5C	92	73.780	ENSPCOG00000016563	ARL5A	100	73.780
ENSPCOG00000028489	ARL5C	96	43.931	ENSPCOG00000027640	ARF5	96	43.931
ENSPCOG00000028489	ARL5C	84	42.138	ENSPCOG00000028187	ARL4C	77	42.138
ENSPCOG00000028489	ARL5C	91	37.209	ENSPCOG00000024163	ARFRP1	84	39.216
ENSPCOG00000028489	ARL5C	98	44.886	ENSPCOG00000001914	-	97	44.886
ENSPCOG00000028489	ARL5C	98	46.591	ENSPCOG00000026770	ARF1	97	46.591
ENSPCOG00000028489	ARL5C	74	33.083	ENSPCOG00000017730	ARL10	54	32.836
ENSPCOG00000028489	ARL5C	97	43.429	ENSPCOG00000001896	ARF4	97	43.429
ENSPCOG00000028489	ARL5C	98	77.143	ENSPCOG00000016365	ARL5B	96	79.375
ENSPCOG00000028489	ARL5C	88	41.772	ENSPCOG00000021131	ARL2	86	41.772
ENSPCOG00000028489	ARL5C	91	46.296	ENSPCOG00000015554	-	91	46.296
ENSPCOG00000028489	ARL5C	92	44.242	ENSPCOG00000024271	ARL3	91	44.242

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000028489	ARL5C	100	88.268	ENSAMEG00000004195	ARL5C	99	88.268	Ailuropoda_melanoleuca
ENSPCOG00000028489	ARL5C	99	83.146	ENSACAG00000003879	-	99	83.146	Anolis_carolinensis
ENSPCOG00000028489	ARL5C	100	92.179	ENSCAFG00000016525	ARL5C	100	92.179	Canis_familiaris
ENSPCOG00000028489	ARL5C	100	90.503	ENSCHIG00000008208	ARL5C	100	90.503	Capra_hircus
ENSPCOG00000028489	ARL5C	59	89.623	ENSCHOG00000013232	-	100	89.623	Choloepus_hoffmanni
ENSPCOG00000028489	ARL5C	99	81.921	ENSCGRG00001000695	Arl5c	99	81.921	Cricetulus_griseus_chok1gshd
ENSPCOG00000028489	ARL5C	99	82.486	ENSCGRG00000007376	Arl5c	99	82.486	Cricetulus_griseus_crigri
ENSPCOG00000028489	ARL5C	100	93.296	ENSDNOG00000019741	ARL5C	100	93.296	Dasypus_novemcinctus
ENSPCOG00000028489	ARL5C	100	88.827	ENSDORG00000016304	Arl5c	100	88.827	Dipodomys_ordii
ENSPCOG00000028489	ARL5C	92	93.902	ENSEASG00005001922	ARL5C	76	93.902	Equus_asinus_asinus
ENSPCOG00000028489	ARL5C	100	93.855	ENSECAG00000009024	ARL5C	100	93.855	Equus_caballus
ENSPCOG00000028489	ARL5C	100	91.620	ENSFCAG00000009962	ARL5C	100	91.620	Felis_catus
ENSPCOG00000028489	ARL5C	100	93.296	ENSSTOG00000011104	ARL5C	100	93.296	Ictidomys_tridecemlineatus
ENSPCOG00000028489	ARL5C	100	78.771	ENSLACG00000015332	ARL5C	100	78.771	Latimeria_chalumnae
ENSPCOG00000028489	ARL5C	100	93.855	ENSLAFG00000018248	ARL5C	99	93.855	Loxodonta_africana
ENSPCOG00000028489	ARL5C	99	77.966	ENSMAUG00000012845	Arl5c	87	77.966	Mesocricetus_auratus
ENSPCOG00000028489	ARL5C	100	96.089	ENSMICG00000002661	ARL5C	100	96.089	Microcebus_murinus
ENSPCOG00000028489	ARL5C	100	78.771	ENSMOCG00000000234	Arl5c	100	78.771	Microtus_ochrogaster
ENSPCOG00000028489	ARL5C	100	90.503	MGP_CAROLIEiJ_G0017071	Arl5c	100	90.503	Mus_caroli
ENSPCOG00000028489	ARL5C	100	89.944	ENSMUSG00000038352	Arl5c	100	89.944	Mus_musculus
ENSPCOG00000028489	ARL5C	100	90.503	MGP_PahariEiJ_G0018200	Arl5c	100	90.503	Mus_pahari
ENSPCOG00000028489	ARL5C	100	89.944	MGP_SPRETEiJ_G0017917	Arl5c	100	89.944	Mus_spretus
ENSPCOG00000028489	ARL5C	100	91.061	ENSMLUG00000030149	ARL5C	99	91.061	Myotis_lucifugus
ENSPCOG00000028489	ARL5C	100	91.061	ENSOGAG00000005894	ARL5C	100	91.061	Otolemur_garnettii
ENSPCOG00000028489	ARL5C	100	91.061	ENSOARG00000010377	ARL5C	99	91.061	Ovis_aries
ENSPCOG00000028489	ARL5C	100	91.620	ENSPPRG00000000975	ARL5C	100	91.620	Panthera_pardus
ENSPCOG00000028489	ARL5C	100	91.620	ENSPTIG00000017487	ARL5C	100	91.620	Panthera_tigris_altaica
ENSPCOG00000028489	ARL5C	99	89.266	ENSPEMG00000008932	Arl5c	99	89.266	Peromyscus_maniculatus_bairdii
ENSPCOG00000028489	ARL5C	94	89.881	ENSPVAG00000008495	ARL5C	99	89.881	Pteropus_vampyrus
ENSPCOG00000028489	ARL5C	100	87.151	ENSRNOG00000036880	Arl5c	100	87.151	Rattus_norvegicus
ENSPCOG00000028489	ARL5C	96	77.907	ENSSBOG00000021022	ARL5C	98	77.907	Saimiri_boliviensis_boliviensis
ENSPCOG00000028489	ARL5C	96	80.702	ENSSPUG00000007555	ARL5C	100	82.822	Sphenodon_punctatus
ENSPCOG00000028489	ARL5C	100	88.827	ENSTBEG00000007274	ARL5C	100	88.827	Tupaia_belangeri
ENSPCOG00000028489	ARL5C	100	91.061	ENSUAMG00000012299	ARL5C	100	91.061	Ursus_americanus
ENSPCOG00000028489	ARL5C	100	91.620	ENSUMAG00000017197	ARL5C	100	91.620	Ursus_maritimus
ENSPCOG00000028489	ARL5C	100	77.095	ENSXETG00000023713	arl5c	92	77.095	Xenopus_tropicalis