EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000000043 (Gene tree)
Gene ID: 102911643
Gene Symbol: Papola
Alias: -
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 51346 bases
Position: chrKI615331.1:14239890-14291235
Accession: 102911643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000000051	PAP_RNA-bind	PF04926.15	5.6e-25	1	1
ENSPEMP00000000053	PAP_RNA-bind	PF04926.15	5.9e-25	1	1
ENSPEMP00000000050	PAP_RNA-bind	PF04926.15	6.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000000054	-	2082	-	ENSPEMP00000000053	693 (aa)	-	-
ENSPEMT00000000052	-	2736	XM_016005913	ENSPEMP00000000051	718 (aa)	XP_015861399	UPI00077DE4B0
ENSPEMT00000000051	-	3331	XM_006971703	ENSPEMP00000000050	739 (aa)	XP_006971765	UPI00042ADCB8

Gene Model

Click here to download ENSPEMG00000000043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000000043	Papola	98	61.401	ENSPEMG00000016248	-	98	61.411
ENSPEMG00000000043	Papola	98	61.401	ENSPEMG00000008960	-	99	61.411

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000043	Papola	100	95.994	ENSG00000090060	PAPOLA	98	98.925	Homo_sapiens
ENSPEMG00000000043	Papola	99	96.341	ENSAMEG00000014142	PAPOLA	99	96.341	Ailuropoda_melanoleuca
ENSPEMG00000000043	Papola	99	91.192	ENSAPLG00000006645	PAPOLA	98	91.436	Anas_platyrhynchos
ENSPEMG00000000043	Papola	99	92.152	ENSACAG00000013474	PAPOLA	99	95.448	Anolis_carolinensis
ENSPEMG00000000043	Papola	77	91.011	ENSANAG00000027941	-	98	91.011	Aotus_nancymaae
ENSPEMG00000000043	Papola	99	97.106	ENSANAG00000018274	PAPOLA	99	98.713	Aotus_nancymaae
ENSPEMG00000000043	Papola	100	73.429	ENSAMXG00000018141	papola	96	86.567	Astyanax_mexicanus
ENSPEMG00000000043	Papola	100	97.835	ENSBTAG00000004054	PAPOLA	100	97.835	Bos_taurus
ENSPEMG00000000043	Papola	100	96.853	ENSCJAG00000006512	PAPOLA	99	98.713	Callithrix_jacchus
ENSPEMG00000000043	Papola	100	95.973	ENSCAFG00000017783	PAPOLA	100	95.973	Canis_familiaris
ENSPEMG00000000043	Papola	100	96.518	ENSCAFG00020011550	PAPOLA	100	96.518	Canis_lupus_dingo
ENSPEMG00000000043	Papola	100	96.211	ENSCHIG00000025004	-	100	96.211	Capra_hircus
ENSPEMG00000000043	Papola	99	96.667	ENSTSYG00000012384	PAPOLA	99	96.667	Carlito_syrichta
ENSPEMG00000000043	Papola	100	93.362	ENSCPOG00000002648	PAPOLA	100	93.362	Cavia_porcellus
ENSPEMG00000000043	Papola	100	95.856	ENSCCAG00000025120	PAPOLA	98	98.152	Cebus_capucinus
ENSPEMG00000000043	Papola	100	95.994	ENSCATG00000018815	PAPOLA	99	99.069	Cercocebus_atys
ENSPEMG00000000043	Papola	100	97.547	ENSCLAG00000016342	PAPOLA	100	97.547	Chinchilla_lanigera
ENSPEMG00000000043	Papola	100	95.839	ENSCSAG00000010516	PAPOLA	100	95.839	Chlorocebus_sabaeus
ENSPEMG00000000043	Papola	72	81.744	ENSCHOG00000001115	PAPOLA	72	81.744	Choloepus_hoffmanni
ENSPEMG00000000043	Papola	100	93.108	ENSCPBG00000024125	PAPOLA	100	93.108	Chrysemys_picta_bellii
ENSPEMG00000000043	Papola	99	90.582	ENSCANG00000000159	PAPOLA	100	90.582	Colobus_angolensis_palliatus
ENSPEMG00000000043	Papola	100	90.934	ENSCGRG00001000229	-	100	90.934	Cricetulus_griseus_chok1gshd
ENSPEMG00000000043	Papola	99	86.856	ENSCGRG00001002732	-	99	86.856	Cricetulus_griseus_chok1gshd
ENSPEMG00000000043	Papola	100	99.323	ENSCGRG00001022693	-	100	99.323	Cricetulus_griseus_chok1gshd
ENSPEMG00000000043	Papola	100	98.920	ENSCGRG00000003664	-	100	99.321	Cricetulus_griseus_crigri
ENSPEMG00000000043	Papola	100	85.977	ENSCGRG00000000257	-	100	85.977	Cricetulus_griseus_crigri
ENSPEMG00000000043	Papola	98	83.333	ENSCGRG00000001888	-	96	83.471	Cricetulus_griseus_crigri
ENSPEMG00000000043	Papola	72	52.695	ENSCSEG00000001841	-	71	54.054	Cynoglossus_semilaevis
ENSPEMG00000000043	Papola	100	70.937	ENSDARG00000009585	papola	100	70.523	Danio_rerio
ENSPEMG00000000043	Papola	65	89.407	ENSDORG00000013415	-	100	90.678	Dipodomys_ordii
ENSPEMG00000000043	Papola	99	83.039	ENSETEG00000004889	PAPOLA	98	83.264	Echinops_telfairi
ENSPEMG00000000043	Papola	100	68.414	ENSELUG00000018972	papola	100	68.700	Esox_lucius
ENSPEMG00000000043	Papola	100	98.124	ENSFCAG00000006784	PAPOLA	100	98.124	Felis_catus
ENSPEMG00000000043	Papola	99	93.750	ENSFALG00000002547	PAPOLA	96	88.606	Ficedula_albicollis
ENSPEMG00000000043	Papola	99	96.087	ENSFDAG00000010370	PAPOLA	100	96.087	Fukomys_damarensis
ENSPEMG00000000043	Papola	73	66.545	ENSGMOG00000010209	papola	100	66.910	Gadus_morhua
ENSPEMG00000000043	Papola	100	90.663	ENSGALG00000033099	PAPOLA	100	90.528	Gallus_gallus
ENSPEMG00000000043	Papola	69	54.167	ENSGACG00000006142	-	100	53.750	Gasterosteus_aculeatus
ENSPEMG00000000043	Papola	96	95.317	ENSGAGG00000020500	PAPOLA	99	95.317	Gopherus_agassizii
ENSPEMG00000000043	Papola	100	95.994	ENSGGOG00000006287	PAPOLA	100	95.994	Gorilla_gorilla
ENSPEMG00000000043	Papola	100	96.970	ENSHGLG00000007909	-	100	96.970	Heterocephalus_glaber_female
ENSPEMG00000000043	Papola	99	83.379	ENSHGLG00000017457	-	98	83.102	Heterocephalus_glaber_female
ENSPEMG00000000043	Papola	100	77.943	ENSHGLG00000007467	-	100	77.673	Heterocephalus_glaber_female
ENSPEMG00000000043	Papola	100	96.825	ENSHGLG00100017273	PAPOLA	100	96.825	Heterocephalus_glaber_male
ENSPEMG00000000043	Papola	100	68.528	ENSIPUG00000005919	papola	100	67.893	Ictalurus_punctatus
ENSPEMG00000000043	Papola	100	97.835	ENSSTOG00000011471	PAPOLA	100	97.835	Ictidomys_tridecemlineatus
ENSPEMG00000000043	Papola	99	97.101	ENSJJAG00000024340	Papola	100	97.101	Jaculus_jaculus
ENSPEMG00000000043	Papola	99	77.058	ENSLACG00000018136	PAPOLA	99	77.058	Latimeria_chalumnae
ENSPEMG00000000043	Papola	99	65.733	ENSLOCG00000008632	papola	99	65.912	Lepisosteus_oculatus
ENSPEMG00000000043	Papola	99	95.652	ENSLAFG00000000946	PAPOLA	98	95.845	Loxodonta_africana
ENSPEMG00000000043	Papola	100	95.994	ENSMFAG00000001792	PAPOLA	99	98.891	Macaca_fascicularis
ENSPEMG00000000043	Papola	99	96.844	ENSMMUG00000018610	PAPOLA	100	96.844	Macaca_mulatta
ENSPEMG00000000043	Papola	100	95.994	ENSMNEG00000043747	PAPOLA	100	96.844	Macaca_nemestrina
ENSPEMG00000000043	Papola	100	95.994	ENSMLEG00000032066	PAPOLA	100	95.994	Mandrillus_leucophaeus
ENSPEMG00000000043	Papola	84	89.855	ENSMGAG00000013228	-	100	89.855	Meleagris_gallopavo
ENSPEMG00000000043	Papola	100	99.423	ENSMAUG00000017178	Papola	100	99.423	Mesocricetus_auratus
ENSPEMG00000000043	Papola	100	97.695	ENSMICG00000010347	PAPOLA	100	97.695	Microcebus_murinus
ENSPEMG00000000043	Papola	100	99.856	ENSMOCG00000021670	Papola	100	99.856	Microtus_ochrogaster
ENSPEMG00000000043	Papola	100	95.670	ENSMODG00000012887	-	100	95.670	Monodelphis_domestica
ENSPEMG00000000043	Papola	99	81.528	ENSMODG00000001969	-	99	81.528	Monodelphis_domestica
ENSPEMG00000000043	Papola	100	98.557	MGP_CAROLIEiJ_G0018093	Papola	100	98.557	Mus_caroli
ENSPEMG00000000043	Papola	100	98.846	ENSMUSG00000021111	Papola	100	98.846	Mus_musculus
ENSPEMG00000000043	Papola	100	98.846	MGP_PahariEiJ_G0029850	Papola	100	98.846	Mus_pahari
ENSPEMG00000000043	Papola	100	98.990	MGP_SPRETEiJ_G0018943	Papola	100	98.990	Mus_spretus
ENSPEMG00000000043	Papola	100	97.158	ENSMPUG00000003054	PAPOLA	100	97.158	Mustela_putorius_furo
ENSPEMG00000000043	Papola	100	94.723	ENSMLUG00000010922	PAPOLA	100	94.723	Myotis_lucifugus
ENSPEMG00000000043	Papola	100	97.835	ENSNGAG00000022172	Papola	100	97.835	Nannospalax_galili
ENSPEMG00000000043	Papola	99	91.360	ENSNLEG00000000625	PAPOLA	100	91.286	Nomascus_leucogenys
ENSPEMG00000000043	Papola	66	87.023	ENSMEUG00000007831	-	74	86.614	Notamacropus_eugenii
ENSPEMG00000000043	Papola	97	91.123	ENSOPRG00000007625	PAPOLA	100	91.123	Ochotona_princeps
ENSPEMG00000000043	Papola	68	54.219	ENSONIG00000001062	-	96	54.219	Oreochromis_niloticus
ENSPEMG00000000043	Papola	99	96.671	ENSOANG00000013812	PAPOLA	99	96.671	Ornithorhynchus_anatinus
ENSPEMG00000000043	Papola	99	93.623	ENSOCUG00000011531	PAPOLA	98	93.638	Oryctolagus_cuniculus
ENSPEMG00000000043	Papola	100	96.757	ENSOGAG00000004611	PAPOLA	100	96.757	Otolemur_garnettii
ENSPEMG00000000043	Papola	100	96.752	ENSOARG00000016579	-	100	96.752	Ovis_aries
ENSPEMG00000000043	Papola	100	95.994	ENSPPAG00000030505	PAPOLA	100	95.994	Pan_paniscus
ENSPEMG00000000043	Papola	100	97.075	ENSPPRG00000008616	PAPOLA	100	97.075	Panthera_pardus
ENSPEMG00000000043	Papola	99	97.063	ENSPTIG00000018852	PAPOLA	99	97.063	Panthera_tigris_altaica
ENSPEMG00000000043	Papola	100	95.994	ENSPTRG00000006704	PAPOLA	100	95.994	Pan_troglodytes
ENSPEMG00000000043	Papola	100	95.994	ENSPANG00000025582	PAPOLA	98	99.069	Papio_anubis
ENSPEMG00000000043	Papola	100	70.436	ENSPKIG00000014471	papola	98	71.170	Paramormyrops_kingsleyae
ENSPEMG00000000043	Papola	100	93.649	ENSPSIG00000014157	PAPOLA	87	93.649	Pelodiscus_sinensis
ENSPEMG00000000043	Papola	100	95.405	ENSPCIG00000013234	PAPOLA	100	96.215	Phascolarctos_cinereus
ENSPEMG00000000043	Papola	100	93.423	ENSPPYG00000006128	PAPOLA	100	93.423	Pongo_abelii
ENSPEMG00000000043	Papola	89	90.701	ENSPCAG00000004199	PAPOLA	100	90.701	Procavia_capensis
ENSPEMG00000000043	Papola	99	93.922	ENSPCOG00000022117	PAPOLA	99	93.922	Propithecus_coquereli
ENSPEMG00000000043	Papola	100	95.535	ENSPVAG00000013925	PAPOLA	100	95.535	Pteropus_vampyrus
ENSPEMG00000000043	Papola	100	72.214	ENSPNAG00000010467	papola	100	72.096	Pygocentrus_nattereri
ENSPEMG00000000043	Papola	100	98.106	ENSRNOG00000004827	Papola	100	98.106	Rattus_norvegicus
ENSPEMG00000000043	Papola	99	96.126	ENSRBIG00000038490	PAPOLA	100	96.126	Rhinopithecus_bieti
ENSPEMG00000000043	Papola	100	95.994	ENSRROG00000025545	PAPOLA	100	95.994	Rhinopithecus_roxellana
ENSPEMG00000000043	Papola	99	96.700	ENSSBOG00000024061	PAPOLA	100	96.700	Saimiri_boliviensis_boliviensis
ENSPEMG00000000043	Papola	99	95.380	ENSSHAG00000015211	PAPOLA	98	95.429	Sarcophilus_harrisii
ENSPEMG00000000043	Papola	100	71.182	ENSSFOG00015004431	papola	97	85.874	Scleropages_formosus
ENSPEMG00000000043	Papola	98	47.584	ENSSDUG00000018247	-	97	46.880	Seriola_dumerili
ENSPEMG00000000043	Papola	100	92.703	ENSSPUG00000005835	PAPOLA	100	92.703	Sphenodon_punctatus
ENSPEMG00000000043	Papola	100	97.835	ENSSSCG00000002505	-	100	97.835	Sus_scrofa
ENSPEMG00000000043	Papola	99	91.180	ENSTGUG00000012687	PAPOLA	98	91.425	Taeniopygia_guttata
ENSPEMG00000000043	Papola	75	88.043	ENSTBEG00000000194	PAPOLA	75	88.043	Tupaia_belangeri
ENSPEMG00000000043	Papola	79	96.875	ENSTTRG00000005717	PAPOLA	80	89.729	Tursiops_truncatus
ENSPEMG00000000043	Papola	61	99.052	ENSUAMG00000025737	PAPOLA	98	99.052	Ursus_americanus
ENSPEMG00000000043	Papola	99	96.060	ENSVPAG00000006464	PAPOLA	100	96.060	Vicugna_pacos
ENSPEMG00000000043	Papola	100	97.835	ENSVVUG00000028340	PAPOLA	100	97.835	Vulpes_vulpes
ENSPEMG00000000043	Papola	100	84.032	ENSXETG00000013949	papola	100	84.032	Xenopus_tropicalis