EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000000076 (Gene tree)
Gene ID: 102927128
Gene Symbol: Lig4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 7980 bases
Position: chrKI615475.1:4272942-4280921
Accession: 102927128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000000092	RNA_ligase	PF09414.10	5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000000093	-	5426	XM_006981336	ENSPEMP00000000092	912 (aa)	XP_006981398	UPI00042AE367

Gene Model

Click here to download ENSPEMG00000000076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000076	Lig4	100	87.171	ENSG00000174405	LIG4	100	87.171	Homo_sapiens
ENSPEMG00000000076	Lig4	99	64.215	ENSAPOG00000000866	lig4	99	64.325	Acanthochromis_polyacanthus
ENSPEMG00000000076	Lig4	100	84.320	ENSAMEG00000019685	LIG4	99	84.320	Ailuropoda_melanoleuca
ENSPEMG00000000076	Lig4	99	64.835	ENSACIG00000018309	lig4	99	64.945	Amphilophus_citrinellus
ENSPEMG00000000076	Lig4	99	63.916	ENSAOCG00000011768	lig4	99	64.026	Amphiprion_ocellaris
ENSPEMG00000000076	Lig4	99	63.916	ENSAPEG00000017815	lig4	99	64.026	Amphiprion_percula
ENSPEMG00000000076	Lig4	99	64.686	ENSATEG00000005583	lig4	99	64.686	Anabas_testudineus
ENSPEMG00000000076	Lig4	97	73.613	ENSAPLG00000001673	LIG4	99	73.613	Anas_platyrhynchos
ENSPEMG00000000076	Lig4	99	74.447	ENSACAG00000014566	LIG4	99	74.447	Anolis_carolinensis
ENSPEMG00000000076	Lig4	100	86.294	ENSANAG00000012446	LIG4	100	86.294	Aotus_nancymaae
ENSPEMG00000000076	Lig4	99	64.505	ENSACLG00000027051	lig4	99	64.505	Astatotilapia_calliptera
ENSPEMG00000000076	Lig4	99	63.388	ENSAMXG00000008192	lig4	94	63.388	Astyanax_mexicanus
ENSPEMG00000000076	Lig4	100	84.978	ENSBTAG00000015868	LIG4	100	84.978	Bos_taurus
ENSPEMG00000000076	Lig4	100	85.855	ENSCJAG00000014689	LIG4	100	85.855	Callithrix_jacchus
ENSPEMG00000000076	Lig4	100	85.197	ENSCAFG00000006031	LIG4	100	85.197	Canis_familiaris
ENSPEMG00000000076	Lig4	100	85.197	ENSCAFG00020021230	LIG4	100	85.197	Canis_lupus_dingo
ENSPEMG00000000076	Lig4	100	84.430	ENSCHIG00000001019	LIG4	100	84.430	Capra_hircus
ENSPEMG00000000076	Lig4	99	85.619	ENSCAPG00000006284	LIG4	99	85.619	Cavia_aperea
ENSPEMG00000000076	Lig4	100	85.526	ENSCPOG00000014266	LIG4	100	85.526	Cavia_porcellus
ENSPEMG00000000076	Lig4	100	85.855	ENSCCAG00000019971	LIG4	100	85.855	Cebus_capucinus
ENSPEMG00000000076	Lig4	100	86.732	ENSCATG00000021075	LIG4	100	86.732	Cercocebus_atys
ENSPEMG00000000076	Lig4	100	85.855	ENSCLAG00000003376	LIG4	100	85.855	Chinchilla_lanigera
ENSPEMG00000000076	Lig4	100	86.842	ENSCSAG00000000211	LIG4	100	86.842	Chlorocebus_sabaeus
ENSPEMG00000000076	Lig4	99	76.490	ENSCPBG00000023291	LIG4	99	76.342	Chrysemys_picta_bellii
ENSPEMG00000000076	Lig4	68	45.166	ENSCING00000009536	-	96	45.166	Ciona_intestinalis
ENSPEMG00000000076	Lig4	83	44.941	ENSCSAVG00000010336	-	98	44.941	Ciona_savignyi
ENSPEMG00000000076	Lig4	100	87.061	ENSCANG00000005805	LIG4	100	87.061	Colobus_angolensis_palliatus
ENSPEMG00000000076	Lig4	100	93.640	ENSCGRG00001012072	Lig4	100	93.640	Cricetulus_griseus_chok1gshd
ENSPEMG00000000076	Lig4	100	93.640	ENSCGRG00000013417	Lig4	100	93.640	Cricetulus_griseus_crigri
ENSPEMG00000000076	Lig4	97	64.189	ENSCSEG00000013905	lig4	96	64.189	Cynoglossus_semilaevis
ENSPEMG00000000076	Lig4	99	64.602	ENSCVAG00000007896	lig4	99	64.602	Cyprinodon_variegatus
ENSPEMG00000000076	Lig4	99	63.234	ENSDARG00000060620	lig4	98	63.234	Danio_rerio
ENSPEMG00000000076	Lig4	100	84.447	ENSDNOG00000000513	LIG4	100	84.447	Dasypus_novemcinctus
ENSPEMG00000000076	Lig4	100	86.184	ENSDORG00000027303	Lig4	100	86.184	Dipodomys_ordii
ENSPEMG00000000076	Lig4	89	31.518	FBgn0030506	Lig4	91	31.518	Drosophila_melanogaster
ENSPEMG00000000076	Lig4	99	80.066	ENSETEG00000015563	LIG4	100	80.399	Echinops_telfairi
ENSPEMG00000000076	Lig4	99	43.246	ENSEBUG00000014243	lig4	99	43.246	Eptatretus_burgeri
ENSPEMG00000000076	Lig4	100	86.075	ENSEASG00005022073	LIG4	100	86.075	Equus_asinus_asinus
ENSPEMG00000000076	Lig4	100	85.746	ENSECAG00000003257	LIG4	100	85.746	Equus_caballus
ENSPEMG00000000076	Lig4	99	65.198	ENSELUG00000006787	lig4	99	65.198	Esox_lucius
ENSPEMG00000000076	Lig4	100	85.088	ENSFCAG00000031985	LIG4	100	85.088	Felis_catus
ENSPEMG00000000076	Lig4	89	75.184	ENSFALG00000004214	LIG4	98	75.184	Ficedula_albicollis
ENSPEMG00000000076	Lig4	100	86.075	ENSFDAG00000008973	LIG4	100	86.075	Fukomys_damarensis
ENSPEMG00000000076	Lig4	99	64.381	ENSFHEG00000007398	lig4	89	64.381	Fundulus_heteroclitus
ENSPEMG00000000076	Lig4	85	63.158	ENSGMOG00000012843	lig4	99	63.543	Gadus_morhua
ENSPEMG00000000076	Lig4	100	72.846	ENSGALG00000016854	LIG4	100	72.846	Gallus_gallus
ENSPEMG00000000076	Lig4	99	64.294	ENSGAFG00000019779	lig4	95	64.341	Gambusia_affinis
ENSPEMG00000000076	Lig4	99	62.389	ENSGACG00000014135	lig4	99	62.389	Gasterosteus_aculeatus
ENSPEMG00000000076	Lig4	100	87.281	ENSGGOG00000027771	LIG4	100	87.281	Gorilla_gorilla
ENSPEMG00000000076	Lig4	99	64.286	ENSHBUG00000006245	lig4	99	64.286	Haplochromis_burtoni
ENSPEMG00000000076	Lig4	100	85.965	ENSHGLG00000000718	LIG4	100	85.965	Heterocephalus_glaber_female
ENSPEMG00000000076	Lig4	100	85.965	ENSHGLG00100003265	LIG4	100	85.965	Heterocephalus_glaber_male
ENSPEMG00000000076	Lig4	99	63.129	ENSHCOG00000012010	lig4	99	63.129	Hippocampus_comes
ENSPEMG00000000076	Lig4	99	64.673	ENSIPUG00000013748	lig4	98	64.673	Ictalurus_punctatus
ENSPEMG00000000076	Lig4	100	86.952	ENSSTOG00000024303	LIG4	100	86.952	Ictidomys_tridecemlineatus
ENSPEMG00000000076	Lig4	100	88.048	ENSJJAG00000006750	Lig4	100	88.048	Jaculus_jaculus
ENSPEMG00000000076	Lig4	99	64.491	ENSKMAG00000001149	lig4	99	64.491	Kryptolebias_marmoratus
ENSPEMG00000000076	Lig4	91	64.380	ENSLBEG00000014578	lig4	99	64.501	Labrus_bergylta
ENSPEMG00000000076	Lig4	99	70.939	ENSLACG00000003282	LIG4	99	70.939	Latimeria_chalumnae
ENSPEMG00000000076	Lig4	99	69.332	ENSLOCG00000008901	lig4	98	69.332	Lepisosteus_oculatus
ENSPEMG00000000076	Lig4	100	83.698	ENSLAFG00000031152	LIG4	100	83.698	Loxodonta_africana
ENSPEMG00000000076	Lig4	100	86.842	ENSMFAG00000037235	LIG4	100	86.842	Macaca_fascicularis
ENSPEMG00000000076	Lig4	100	86.842	ENSMMUG00000008874	LIG4	100	86.842	Macaca_mulatta
ENSPEMG00000000076	Lig4	100	86.842	ENSMNEG00000023575	LIG4	100	86.842	Macaca_nemestrina
ENSPEMG00000000076	Lig4	100	86.623	ENSMLEG00000026720	LIG4	100	86.623	Mandrillus_leucophaeus
ENSPEMG00000000076	Lig4	99	64.654	ENSMAMG00000008472	lig4	99	64.764	Mastacembelus_armatus
ENSPEMG00000000076	Lig4	99	64.505	ENSMZEG00005001855	lig4	99	64.505	Maylandia_zebra
ENSPEMG00000000076	Lig4	100	73.501	ENSMGAG00000015532	LIG4	100	73.501	Meleagris_gallopavo
ENSPEMG00000000076	Lig4	100	90.680	ENSMOCG00000019000	Lig4	100	90.680	Microtus_ochrogaster
ENSPEMG00000000076	Lig4	99	63.053	ENSMMOG00000004390	lig4	99	63.164	Mola_mola
ENSPEMG00000000076	Lig4	100	80.044	ENSMODG00000025064	LIG4	100	80.394	Monodelphis_domestica
ENSPEMG00000000076	Lig4	99	64.270	ENSMALG00000008555	lig4	99	64.270	Monopterus_albus
ENSPEMG00000000076	Lig4	100	91.886	MGP_CAROLIEiJ_G0030809	Lig4	100	91.886	Mus_caroli
ENSPEMG00000000076	Lig4	100	91.338	ENSMUSG00000049717	Lig4	100	91.338	Mus_musculus
ENSPEMG00000000076	Lig4	100	91.886	MGP_PahariEiJ_G0021270	Lig4	100	91.886	Mus_pahari
ENSPEMG00000000076	Lig4	100	91.338	MGP_SPRETEiJ_G0031917	Lig4	100	91.338	Mus_spretus
ENSPEMG00000000076	Lig4	100	84.868	ENSMPUG00000018675	LIG4	100	84.868	Mustela_putorius_furo
ENSPEMG00000000076	Lig4	100	85.746	ENSMLUG00000001267	LIG4	100	85.746	Myotis_lucifugus
ENSPEMG00000000076	Lig4	100	88.487	ENSNGAG00000013258	Lig4	100	88.487	Nannospalax_galili
ENSPEMG00000000076	Lig4	99	64.725	ENSNBRG00000021252	lig4	99	64.725	Neolamprologus_brichardi
ENSPEMG00000000076	Lig4	100	86.842	ENSNLEG00000007888	LIG4	100	86.842	Nomascus_leucogenys
ENSPEMG00000000076	Lig4	100	84.978	ENSOPRG00000005765	LIG4	100	84.978	Ochotona_princeps
ENSPEMG00000000076	Lig4	100	83.991	ENSODEG00000019683	LIG4	100	83.991	Octodon_degus
ENSPEMG00000000076	Lig4	99	64.396	ENSONIG00000011969	lig4	98	64.505	Oreochromis_niloticus
ENSPEMG00000000076	Lig4	100	86.294	ENSOCUG00000015734	LIG4	100	86.294	Oryctolagus_cuniculus
ENSPEMG00000000076	Lig4	99	62.678	ENSORLG00000004041	lig4	99	62.651	Oryzias_latipes
ENSPEMG00000000076	Lig4	99	63.227	ENSORLG00020019607	lig4	99	63.337	Oryzias_latipes_hni
ENSPEMG00000000076	Lig4	99	62.651	ENSORLG00015017754	lig4	99	62.760	Oryzias_latipes_hsok
ENSPEMG00000000076	Lig4	74	68.343	ENSOMEG00000003459	lig4	98	68.343	Oryzias_melastigma
ENSPEMG00000000076	Lig4	100	85.433	ENSOGAG00000032120	LIG4	99	85.433	Otolemur_garnettii
ENSPEMG00000000076	Lig4	82	85.772	ENSOARG00000005590	LIG4	98	85.772	Ovis_aries
ENSPEMG00000000076	Lig4	100	86.732	ENSPPAG00000032998	LIG4	100	86.732	Pan_paniscus
ENSPEMG00000000076	Lig4	100	85.526	ENSPPRG00000017804	LIG4	100	85.526	Panthera_pardus
ENSPEMG00000000076	Lig4	100	85.636	ENSPTIG00000010051	LIG4	100	85.636	Panthera_tigris_altaica
ENSPEMG00000000076	Lig4	100	86.842	ENSPTRG00000006025	LIG4	100	86.842	Pan_troglodytes
ENSPEMG00000000076	Lig4	100	86.842	ENSPANG00000007562	LIG4	100	86.842	Papio_anubis
ENSPEMG00000000076	Lig4	99	65.022	ENSPKIG00000011645	lig4	98	65.022	Paramormyrops_kingsleyae
ENSPEMG00000000076	Lig4	99	76.535	ENSPSIG00000001504	LIG4	99	76.535	Pelodiscus_sinensis
ENSPEMG00000000076	Lig4	99	60.821	ENSPMGG00000013486	lig4	99	60.526	Periophthalmus_magnuspinnatus
ENSPEMG00000000076	Lig4	100	79.956	ENSPCIG00000021882	LIG4	100	79.956	Phascolarctos_cinereus
ENSPEMG00000000076	Lig4	99	64.222	ENSPFOG00000000797	lig4	98	64.270	Poecilia_formosa
ENSPEMG00000000076	Lig4	99	64.111	ENSPLAG00000001196	lig4	98	64.159	Poecilia_latipinna
ENSPEMG00000000076	Lig4	99	64.222	ENSPMEG00000021353	lig4	98	64.491	Poecilia_mexicana
ENSPEMG00000000076	Lig4	99	63.778	ENSPREG00000007323	lig4	98	64.049	Poecilia_reticulata
ENSPEMG00000000076	Lig4	100	87.061	ENSPPYG00000005540	LIG4	100	87.061	Pongo_abelii
ENSPEMG00000000076	Lig4	100	84.759	ENSPVAG00000016403	LIG4	100	84.759	Pteropus_vampyrus
ENSPEMG00000000076	Lig4	99	64.396	ENSPNYG00000009660	lig4	99	64.396	Pundamilia_nyererei
ENSPEMG00000000076	Lig4	100	63.965	ENSPNAG00000028056	lig4	100	64.074	Pygocentrus_nattereri
ENSPEMG00000000076	Lig4	100	63.965	ENSPNAG00000028069	LIG4	100	64.074	Pygocentrus_nattereri
ENSPEMG00000000076	Lig4	100	91.009	ENSRNOG00000014605	Lig4	100	91.009	Rattus_norvegicus
ENSPEMG00000000076	Lig4	100	85.636	ENSRBIG00000039962	LIG4	100	85.636	Rhinopithecus_bieti
ENSPEMG00000000076	Lig4	100	86.623	ENSRROG00000006040	LIG4	100	86.623	Rhinopithecus_roxellana
ENSPEMG00000000076	Lig4	100	85.746	ENSSBOG00000019029	LIG4	100	85.746	Saimiri_boliviensis_boliviensis
ENSPEMG00000000076	Lig4	100	77.875	ENSSHAG00000009525	LIG4	100	77.985	Sarcophilus_harrisii
ENSPEMG00000000076	Lig4	99	65.155	ENSSFOG00015012835	lig4	99	65.155	Scleropages_formosus
ENSPEMG00000000076	Lig4	99	62.389	ENSSMAG00000011267	lig4	99	62.389	Scophthalmus_maximus
ENSPEMG00000000076	Lig4	99	65.006	ENSSDUG00000010343	lig4	98	65.116	Seriola_dumerili
ENSPEMG00000000076	Lig4	99	63.274	ENSSLDG00000003239	lig4	99	63.274	Seriola_lalandi_dorsalis
ENSPEMG00000000076	Lig4	100	80.656	ENSSARG00000006573	LIG4	100	80.656	Sorex_araneus
ENSPEMG00000000076	Lig4	93	75.858	ENSSPUG00000002444	LIG4	100	75.858	Sphenodon_punctatus
ENSPEMG00000000076	Lig4	99	64.712	ENSSPAG00000001609	lig4	99	64.823	Stegastes_partitus
ENSPEMG00000000076	Lig4	99	84.945	ENSSSCG00000009540	LIG4	99	84.945	Sus_scrofa
ENSPEMG00000000076	Lig4	99	74.254	ENSTGUG00000010795	LIG4	99	74.254	Taeniopygia_guttata
ENSPEMG00000000076	Lig4	99	64.270	ENSTRUG00000009984	lig4	99	64.270	Takifugu_rubripes
ENSPEMG00000000076	Lig4	99	64.159	ENSTNIG00000010348	lig4	99	64.381	Tetraodon_nigroviridis
ENSPEMG00000000076	Lig4	100	86.732	ENSTBEG00000017741	LIG4	100	86.732	Tupaia_belangeri
ENSPEMG00000000076	Lig4	100	86.294	ENSTTRG00000012660	LIG4	100	86.294	Tursiops_truncatus
ENSPEMG00000000076	Lig4	100	84.539	ENSUAMG00000003773	LIG4	100	84.539	Ursus_americanus
ENSPEMG00000000076	Lig4	99	69.527	ENSXETG00000002654	lig4	99	69.527	Xenopus_tropicalis
ENSPEMG00000000076	Lig4	99	64.000	ENSXCOG00000017401	lig4	98	64.049	Xiphophorus_couchianus
ENSPEMG00000000076	Lig4	99	64.262	ENSXMAG00000015142	lig4	98	64.309	Xiphophorus_maculatus