EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000000111 (Gene tree)
Gene ID: 102912998
Gene Symbol: Xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 77814 bases
Position: chrKI615548.1:3693211-3771024
Accession: 102912998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000000149	XRN_N	PF03159.18	4.4e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000000150	-	3425	XM_006984481	ENSPEMP00000000149	950 (aa)	XP_006984543	UPI00042AF89B

Gene Model

Click here to download ENSPEMG00000000111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000000111	Xrn2	71	38.767	ENSPEMG00000020610	Xrn1	61	38.563

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000111	Xrn2	100	96.211	ENSG00000088930	XRN2	100	96.211	Homo_sapiens
ENSPEMG00000000111	Xrn2	97	72.009	ENSAPOG00000009818	xrn2	100	70.642	Acanthochromis_polyacanthus
ENSPEMG00000000111	Xrn2	100	95.895	ENSAMEG00000012581	XRN2	100	95.895	Ailuropoda_melanoleuca
ENSPEMG00000000111	Xrn2	90	71.445	ENSACIG00000015047	xrn2	95	75.432	Amphilophus_citrinellus
ENSPEMG00000000111	Xrn2	97	72.329	ENSAOCG00000023632	xrn2	100	71.050	Amphiprion_ocellaris
ENSPEMG00000000111	Xrn2	97	72.252	ENSAPEG00000014871	xrn2	100	70.876	Amphiprion_percula
ENSPEMG00000000111	Xrn2	95	71.723	ENSATEG00000001273	xrn2	97	71.050	Anabas_testudineus
ENSPEMG00000000111	Xrn2	97	82.670	ENSAPLG00000013869	XRN2	99	83.100	Anas_platyrhynchos
ENSPEMG00000000111	Xrn2	100	79.400	ENSACAG00000005565	XRN2	100	79.400	Anolis_carolinensis
ENSPEMG00000000111	Xrn2	100	95.684	ENSANAG00000020126	XRN2	100	95.684	Aotus_nancymaae
ENSPEMG00000000111	Xrn2	90	74.018	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSPEMG00000000111	Xrn2	100	71.677	ENSAMXG00000018301	xrn2	100	71.677	Astyanax_mexicanus
ENSPEMG00000000111	Xrn2	100	93.796	ENSBTAG00000011304	XRN2	100	93.796	Bos_taurus
ENSPEMG00000000111	Xrn2	86	55.374	WBGene00006964	xrn-2	88	55.145	Caenorhabditis_elegans
ENSPEMG00000000111	Xrn2	100	95.789	ENSCJAG00000005611	XRN2	100	95.789	Callithrix_jacchus
ENSPEMG00000000111	Xrn2	100	95.684	ENSCAFG00000005185	XRN2	100	95.684	Canis_familiaris
ENSPEMG00000000111	Xrn2	100	95.684	ENSCAFG00020027479	XRN2	100	95.684	Canis_lupus_dingo
ENSPEMG00000000111	Xrn2	100	93.796	ENSCHIG00000006921	XRN2	100	93.796	Capra_hircus
ENSPEMG00000000111	Xrn2	100	95.158	ENSTSYG00000008315	XRN2	100	95.158	Carlito_syrichta
ENSPEMG00000000111	Xrn2	97	81.957	ENSCAPG00000010773	XRN2	99	81.848	Cavia_aperea
ENSPEMG00000000111	Xrn2	100	96.632	ENSCPOG00000009407	XRN2	100	96.632	Cavia_porcellus
ENSPEMG00000000111	Xrn2	100	96.316	ENSCATG00000040350	XRN2	100	96.316	Cercocebus_atys
ENSPEMG00000000111	Xrn2	100	96.421	ENSCLAG00000013419	XRN2	100	96.421	Chinchilla_lanigera
ENSPEMG00000000111	Xrn2	100	96.316	ENSCSAG00000011094	XRN2	100	96.316	Chlorocebus_sabaeus
ENSPEMG00000000111	Xrn2	68	98.925	ENSCHOG00000013404	XRN2	70	98.925	Choloepus_hoffmanni
ENSPEMG00000000111	Xrn2	100	83.542	ENSCPBG00000023533	XRN2	100	84.167	Chrysemys_picta_bellii
ENSPEMG00000000111	Xrn2	86	59.666	ENSCING00000022336	-	100	59.905	Ciona_intestinalis
ENSPEMG00000000111	Xrn2	98	52.482	ENSCSAVG00000011217	-	98	69.053	Ciona_savignyi
ENSPEMG00000000111	Xrn2	100	96.316	ENSCANG00000040240	XRN2	100	96.316	Colobus_angolensis_palliatus
ENSPEMG00000000111	Xrn2	98	98.170	ENSCGRG00001010676	Xrn2	99	98.170	Cricetulus_griseus_chok1gshd
ENSPEMG00000000111	Xrn2	97	97.411	ENSCGRG00000006378	Xrn2	99	97.411	Cricetulus_griseus_crigri
ENSPEMG00000000111	Xrn2	54	72.353	ENSCSEG00000005628	xrn2	100	72.353	Cynoglossus_semilaevis
ENSPEMG00000000111	Xrn2	89	71.839	ENSCVAG00000018999	xrn2	98	77.524	Cyprinodon_variegatus
ENSPEMG00000000111	Xrn2	100	70.021	ENSDARG00000101900	xrn2	96	78.585	Danio_rerio
ENSPEMG00000000111	Xrn2	100	95.263	ENSDNOG00000001895	XRN2	100	95.263	Dasypus_novemcinctus
ENSPEMG00000000111	Xrn2	100	93.368	ENSDORG00000005434	Xrn2	100	93.368	Dipodomys_ordii
ENSPEMG00000000111	Xrn2	87	56.250	FBgn0031868	Rat1	88	55.423	Drosophila_melanogaster
ENSPEMG00000000111	Xrn2	100	82.316	ENSETEG00000001740	XRN2	100	82.316	Echinops_telfairi
ENSPEMG00000000111	Xrn2	84	70.773	ENSEBUG00000016136	xrn2	100	70.773	Eptatretus_burgeri
ENSPEMG00000000111	Xrn2	100	95.684	ENSEASG00005002484	XRN2	100	95.684	Equus_asinus_asinus
ENSPEMG00000000111	Xrn2	99	95.776	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSPEMG00000000111	Xrn2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSPEMG00000000111	Xrn2	100	69.703	ENSELUG00000000552	xrn2	100	70.184	Esox_lucius
ENSPEMG00000000111	Xrn2	100	95.684	ENSFCAG00000007970	XRN2	100	95.684	Felis_catus
ENSPEMG00000000111	Xrn2	100	81.866	ENSFALG00000004508	XRN2	100	82.285	Ficedula_albicollis
ENSPEMG00000000111	Xrn2	100	95.895	ENSFDAG00000016311	XRN2	100	95.895	Fukomys_damarensis
ENSPEMG00000000111	Xrn2	54	69.962	ENSFHEG00000013039	xrn2	98	69.962	Fundulus_heteroclitus
ENSPEMG00000000111	Xrn2	86	72.904	ENSGMOG00000013436	xrn2	100	72.904	Gadus_morhua
ENSPEMG00000000111	Xrn2	100	82.304	ENSGALG00000008372	XRN2	100	82.304	Gallus_gallus
ENSPEMG00000000111	Xrn2	89	74.302	ENSGAFG00000014284	xrn2	98	74.302	Gambusia_affinis
ENSPEMG00000000111	Xrn2	87	75.120	ENSGACG00000011870	xrn2	100	75.120	Gasterosteus_aculeatus
ENSPEMG00000000111	Xrn2	100	83.229	ENSGAGG00000004884	XRN2	100	83.854	Gopherus_agassizii
ENSPEMG00000000111	Xrn2	100	96.421	ENSGGOG00000013738	XRN2	100	96.421	Gorilla_gorilla
ENSPEMG00000000111	Xrn2	54	74.472	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSPEMG00000000111	Xrn2	100	95.053	ENSHGLG00000014831	XRN2	100	94.842	Heterocephalus_glaber_female
ENSPEMG00000000111	Xrn2	100	95.053	ENSHGLG00100013130	XRN2	100	94.842	Heterocephalus_glaber_male
ENSPEMG00000000111	Xrn2	99	68.016	ENSHCOG00000011994	xrn2	99	68.731	Hippocampus_comes
ENSPEMG00000000111	Xrn2	100	70.234	ENSIPUG00000006639	xrn2	100	70.234	Ictalurus_punctatus
ENSPEMG00000000111	Xrn2	100	96.211	ENSSTOG00000000589	XRN2	100	96.211	Ictidomys_tridecemlineatus
ENSPEMG00000000111	Xrn2	100	95.789	ENSJJAG00000022128	Xrn2	100	95.789	Jaculus_jaculus
ENSPEMG00000000111	Xrn2	54	79.883	ENSLBEG00000010041	xrn2	100	79.883	Labrus_bergylta
ENSPEMG00000000111	Xrn2	94	76.529	ENSLACG00000008307	XRN2	97	79.627	Latimeria_chalumnae
ENSPEMG00000000111	Xrn2	99	72.490	ENSLOCG00000016874	xrn2	100	72.490	Lepisosteus_oculatus
ENSPEMG00000000111	Xrn2	100	94.842	ENSLAFG00000014624	XRN2	100	94.842	Loxodonta_africana
ENSPEMG00000000111	Xrn2	100	96.316	ENSMFAG00000038122	XRN2	100	96.316	Macaca_fascicularis
ENSPEMG00000000111	Xrn2	100	96.316	ENSMMUG00000011405	XRN2	100	96.316	Macaca_mulatta
ENSPEMG00000000111	Xrn2	100	96.211	ENSMNEG00000040626	XRN2	100	96.211	Macaca_nemestrina
ENSPEMG00000000111	Xrn2	100	96.211	ENSMLEG00000041897	XRN2	100	96.211	Mandrillus_leucophaeus
ENSPEMG00000000111	Xrn2	95	73.035	ENSMAMG00000008633	xrn2	98	71.504	Mastacembelus_armatus
ENSPEMG00000000111	Xrn2	90	75.982	ENSMZEG00005022362	xrn2	97	75.982	Maylandia_zebra
ENSPEMG00000000111	Xrn2	99	80.729	ENSMGAG00000003196	XRN2	99	80.729	Meleagris_gallopavo
ENSPEMG00000000111	Xrn2	100	97.684	ENSMAUG00000021842	Xrn2	100	97.684	Mesocricetus_auratus
ENSPEMG00000000111	Xrn2	100	95.579	ENSMICG00000008126	XRN2	100	95.579	Microcebus_murinus
ENSPEMG00000000111	Xrn2	100	97.474	ENSMOCG00000012588	Xrn2	100	97.474	Microtus_ochrogaster
ENSPEMG00000000111	Xrn2	89	73.540	ENSMMOG00000017576	xrn2	96	74.383	Mola_mola
ENSPEMG00000000111	Xrn2	100	89.158	ENSMODG00000006163	XRN2	100	89.158	Monodelphis_domestica
ENSPEMG00000000111	Xrn2	91	72.247	ENSMALG00000011355	xrn2	95	76.291	Monopterus_albus
ENSPEMG00000000111	Xrn2	100	96.635	MGP_CAROLIEiJ_G0024400	Xrn2	100	96.635	Mus_caroli
ENSPEMG00000000111	Xrn2	100	96.635	ENSMUSG00000027433	Xrn2	100	96.635	Mus_musculus
ENSPEMG00000000111	Xrn2	100	96.425	MGP_PahariEiJ_G0025843	Xrn2	100	96.425	Mus_pahari
ENSPEMG00000000111	Xrn2	100	96.635	MGP_SPRETEiJ_G0025318	Xrn2	100	96.635	Mus_spretus
ENSPEMG00000000111	Xrn2	100	94.105	ENSMPUG00000001198	XRN2	93	94.105	Mustela_putorius_furo
ENSPEMG00000000111	Xrn2	100	95.684	ENSMLUG00000001536	XRN2	100	95.684	Myotis_lucifugus
ENSPEMG00000000111	Xrn2	100	97.158	ENSNGAG00000018138	Xrn2	100	97.158	Nannospalax_galili
ENSPEMG00000000111	Xrn2	90	76.532	ENSNBRG00000008062	xrn2	97	76.532	Neolamprologus_brichardi
ENSPEMG00000000111	Xrn2	100	96.211	ENSNLEG00000009991	XRN2	100	96.211	Nomascus_leucogenys
ENSPEMG00000000111	Xrn2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSPEMG00000000111	Xrn2	75	78.010	ENSOPRG00000001397	-	77	78.010	Ochotona_princeps
ENSPEMG00000000111	Xrn2	100	95.684	ENSODEG00000010745	-	100	95.684	Octodon_degus
ENSPEMG00000000111	Xrn2	98	86.731	ENSODEG00000000860	-	99	87.163	Octodon_degus
ENSPEMG00000000111	Xrn2	100	71.649	ENSONIG00000018720	xrn2	100	71.930	Oreochromis_niloticus
ENSPEMG00000000111	Xrn2	100	89.601	ENSOANG00000015673	XRN2	100	89.601	Ornithorhynchus_anatinus
ENSPEMG00000000111	Xrn2	100	96.211	ENSOCUG00000013468	XRN2	100	96.211	Oryctolagus_cuniculus
ENSPEMG00000000111	Xrn2	98	70.717	ENSORLG00000017213	xrn2	97	75.404	Oryzias_latipes
ENSPEMG00000000111	Xrn2	98	70.717	ENSORLG00020001824	xrn2	100	70.367	Oryzias_latipes_hni
ENSPEMG00000000111	Xrn2	98	70.509	ENSORLG00015019747	xrn2	100	70.163	Oryzias_latipes_hsok
ENSPEMG00000000111	Xrn2	90	74.134	ENSOMEG00000019820	xrn2	100	69.036	Oryzias_melastigma
ENSPEMG00000000111	Xrn2	100	95.478	ENSOGAG00000001068	XRN2	100	95.478	Otolemur_garnettii
ENSPEMG00000000111	Xrn2	97	93.629	ENSOARG00000004443	XRN2	100	93.629	Ovis_aries
ENSPEMG00000000111	Xrn2	100	96.421	ENSPPAG00000033549	XRN2	100	96.421	Pan_paniscus
ENSPEMG00000000111	Xrn2	100	95.684	ENSPPRG00000008732	XRN2	100	95.684	Panthera_pardus
ENSPEMG00000000111	Xrn2	97	95.568	ENSPTIG00000015683	XRN2	97	95.568	Panthera_tigris_altaica
ENSPEMG00000000111	Xrn2	100	96.421	ENSPTRG00000013308	XRN2	100	96.421	Pan_troglodytes
ENSPEMG00000000111	Xrn2	100	96.316	ENSPANG00000018088	XRN2	100	96.316	Papio_anubis
ENSPEMG00000000111	Xrn2	100	70.727	ENSPKIG00000016889	xrn2	100	70.727	Paramormyrops_kingsleyae
ENSPEMG00000000111	Xrn2	81	86.068	ENSPSIG00000014666	XRN2	100	86.068	Pelodiscus_sinensis
ENSPEMG00000000111	Xrn2	100	69.782	ENSPFOG00000004182	xrn2	99	70.393	Poecilia_formosa
ENSPEMG00000000111	Xrn2	89	74.767	ENSPLAG00000007351	xrn2	96	74.767	Poecilia_latipinna
ENSPEMG00000000111	Xrn2	94	68.634	ENSPMEG00000011798	xrn2	99	69.423	Poecilia_mexicana
ENSPEMG00000000111	Xrn2	89	74.767	ENSPREG00000012452	xrn2	99	73.176	Poecilia_reticulata
ENSPEMG00000000111	Xrn2	100	95.895	ENSPPYG00000010755	XRN2	100	95.895	Pongo_abelii
ENSPEMG00000000111	Xrn2	100	89.286	ENSPCAG00000011191	XRN2	100	89.286	Procavia_capensis
ENSPEMG00000000111	Xrn2	100	88.632	ENSPCOG00000016468	XRN2	100	88.632	Propithecus_coquereli
ENSPEMG00000000111	Xrn2	93	93.617	ENSPVAG00000004596	XRN2	93	93.617	Pteropus_vampyrus
ENSPEMG00000000111	Xrn2	90	74.018	ENSPNYG00000001765	xrn2	97	74.018	Pundamilia_nyererei
ENSPEMG00000000111	Xrn2	100	71.531	ENSPNAG00000010956	xrn2	99	71.531	Pygocentrus_nattereri
ENSPEMG00000000111	Xrn2	100	96.845	ENSRNOG00000011785	Xrn2	100	96.845	Rattus_norvegicus
ENSPEMG00000000111	Xrn2	86	96.455	ENSRBIG00000036193	XRN2	100	96.455	Rhinopithecus_bieti
ENSPEMG00000000111	Xrn2	100	96.316	ENSRROG00000044400	XRN2	90	96.316	Rhinopithecus_roxellana
ENSPEMG00000000111	Xrn2	64	55.000	YOR048C	RAT1	63	54.087	Saccharomyces_cerevisiae
ENSPEMG00000000111	Xrn2	100	96.000	ENSSBOG00000021014	XRN2	100	96.000	Saimiri_boliviensis_boliviensis
ENSPEMG00000000111	Xrn2	100	72.033	ENSSFOG00015001091	xrn2	100	72.033	Scleropages_formosus
ENSPEMG00000000111	Xrn2	92	73.251	ENSSMAG00000007834	xrn2	100	68.794	Scophthalmus_maximus
ENSPEMG00000000111	Xrn2	91	72.059	ENSSDUG00000012802	xrn2	99	72.398	Seriola_dumerili
ENSPEMG00000000111	Xrn2	93	74.041	ENSSLDG00000021273	xrn2	100	74.041	Seriola_lalandi_dorsalis
ENSPEMG00000000111	Xrn2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSPEMG00000000111	Xrn2	98	78.526	ENSSPUG00000005485	XRN2	96	78.632	Sphenodon_punctatus
ENSPEMG00000000111	Xrn2	100	70.522	ENSSPAG00000016027	xrn2	99	70.522	Stegastes_partitus
ENSPEMG00000000111	Xrn2	100	94.000	ENSSSCG00000007109	XRN2	100	94.000	Sus_scrofa
ENSPEMG00000000111	Xrn2	100	80.689	ENSTGUG00000007535	XRN2	100	81.106	Taeniopygia_guttata
ENSPEMG00000000111	Xrn2	100	67.879	ENSTRUG00000015489	xrn2	100	68.320	Takifugu_rubripes
ENSPEMG00000000111	Xrn2	100	71.547	ENSTNIG00000010712	xrn2	100	71.547	Tetraodon_nigroviridis
ENSPEMG00000000111	Xrn2	100	95.789	ENSTBEG00000004119	XRN2	100	95.789	Tupaia_belangeri
ENSPEMG00000000111	Xrn2	93	96.396	ENSTTRG00000009087	XRN2	93	96.396	Tursiops_truncatus
ENSPEMG00000000111	Xrn2	100	96.000	ENSUAMG00000024634	XRN2	100	96.000	Ursus_americanus
ENSPEMG00000000111	Xrn2	97	95.676	ENSUMAG00000004012	XRN2	95	95.676	Ursus_maritimus
ENSPEMG00000000111	Xrn2	89	88.876	ENSVPAG00000010694	XRN2	91	88.876	Vicugna_pacos
ENSPEMG00000000111	Xrn2	100	95.789	ENSVVUG00000012178	XRN2	100	95.789	Vulpes_vulpes
ENSPEMG00000000111	Xrn2	100	73.881	ENSXETG00000023501	xrn2	100	74.506	Xenopus_tropicalis
ENSPEMG00000000111	Xrn2	100	68.731	ENSXMAG00000000242	xrn2	92	79.319	Xiphophorus_maculatus