EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000000251 (Gene tree)
Gene ID: 102903761
Gene Symbol: Shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 123189 bases
Position: chrKI615340.1:10399911-10523099
Accession: 102903761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000000357	SHQ1	PF04925.15	1.1e-69	1	1
ENSPEMP00000000359	SHQ1	PF04925.15	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000000361	-	1380	-	ENSPEMP00000000359	459 (aa)	-	-
ENSPEMT00000000359	-	2682	XM_006972588	ENSPEMP00000000357	570 (aa)	XP_006972650	UPI00042ABF7B

Gene Model

Click here to download ENSPEMG00000000251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000251	Shq1	98	85.246	ENSG00000144736	SHQ1	100	86.000	Homo_sapiens
ENSPEMG00000000251	Shq1	78	59.417	ENSAPOG00000000397	shq1	72	59.955	Acanthochromis_polyacanthus
ENSPEMG00000000251	Shq1	100	87.295	ENSAMEG00000015140	SHQ1	100	76.817	Ailuropoda_melanoleuca
ENSPEMG00000000251	Shq1	76	61.149	ENSACIG00000021249	shq1	67	61.594	Amphilophus_citrinellus
ENSPEMG00000000251	Shq1	78	60.538	ENSAOCG00000023311	shq1	71	61.074	Amphiprion_ocellaris
ENSPEMG00000000251	Shq1	78	60.314	ENSAPEG00000021686	shq1	72	60.850	Amphiprion_percula
ENSPEMG00000000251	Shq1	77	60.497	ENSATEG00000008475	shq1	65	62.406	Anabas_testudineus
ENSPEMG00000000251	Shq1	81	67.755	ENSAPLG00000013926	SHQ1	100	63.654	Anas_platyrhynchos
ENSPEMG00000000251	Shq1	96	68.398	ENSACAG00000014809	SHQ1	85	61.111	Anolis_carolinensis
ENSPEMG00000000251	Shq1	100	83.197	ENSANAG00000029241	SHQ1	100	76.471	Aotus_nancymaae
ENSPEMG00000000251	Shq1	96	61.081	ENSANAG00000030500	-	98	58.929	Aotus_nancymaae
ENSPEMG00000000251	Shq1	76	58.581	ENSACLG00000023077	shq1	62	60.750	Astatotilapia_calliptera
ENSPEMG00000000251	Shq1	76	55.324	ENSAMXG00000043822	shq1	65	58.575	Astyanax_mexicanus
ENSPEMG00000000251	Shq1	100	84.836	ENSBTAG00000005436	SHQ1	100	75.517	Bos_taurus
ENSPEMG00000000251	Shq1	76	33.108	WBGene00021655	Y48A5A.1	88	34.483	Caenorhabditis_elegans
ENSPEMG00000000251	Shq1	98	83.607	ENSCJAG00000015131	SHQ1	100	76.207	Callithrix_jacchus
ENSPEMG00000000251	Shq1	100	86.066	ENSCAFG00000006434	SHQ1	99	76.990	Canis_familiaris
ENSPEMG00000000251	Shq1	100	86.066	ENSCAFG00020016743	SHQ1	99	76.990	Canis_lupus_dingo
ENSPEMG00000000251	Shq1	100	84.426	ENSCHIG00000012271	SHQ1	91	75.517	Capra_hircus
ENSPEMG00000000251	Shq1	99	74.403	ENSTSYG00000014439	SHQ1	99	73.333	Carlito_syrichta
ENSPEMG00000000251	Shq1	90	65.891	ENSCAPG00000009343	SHQ1	96	87.662	Cavia_aperea
ENSPEMG00000000251	Shq1	98	84.016	ENSCPOG00000011443	SHQ1	90	84.016	Cavia_porcellus
ENSPEMG00000000251	Shq1	96	61.319	ENSCCAG00000036087	-	97	59.107	Cebus_capucinus
ENSPEMG00000000251	Shq1	98	67.549	ENSCCAG00000027080	SHQ1	98	68.254	Cebus_capucinus
ENSPEMG00000000251	Shq1	100	84.016	ENSCATG00000041238	SHQ1	100	76.379	Cercocebus_atys
ENSPEMG00000000251	Shq1	98	84.426	ENSCLAG00000004206	SHQ1	99	76.430	Chinchilla_lanigera
ENSPEMG00000000251	Shq1	81	78.065	ENSCSAG00000011514	SHQ1	100	73.116	Chlorocebus_sabaeus
ENSPEMG00000000251	Shq1	61	71.014	ENSCHOG00000003273	-	100	71.014	Choloepus_hoffmanni
ENSPEMG00000000251	Shq1	97	70.711	ENSCPBG00000006441	SHQ1	93	62.872	Chrysemys_picta_bellii
ENSPEMG00000000251	Shq1	68	50.000	ENSCING00000008013	-	85	42.145	Ciona_intestinalis
ENSPEMG00000000251	Shq1	62	62.791	ENSCSAVG00000002332	-	70	62.791	Ciona_savignyi
ENSPEMG00000000251	Shq1	99	84.016	ENSCANG00000039295	SHQ1	100	76.655	Colobus_angolensis_palliatus
ENSPEMG00000000251	Shq1	100	94.672	ENSCGRG00001012583	Shq1	100	94.672	Cricetulus_griseus_chok1gshd
ENSPEMG00000000251	Shq1	100	94.672	ENSCGRG00000009849	Shq1	100	94.672	Cricetulus_griseus_crigri
ENSPEMG00000000251	Shq1	79	60.573	ENSCSEG00000007829	shq1	72	60.573	Cynoglossus_semilaevis
ENSPEMG00000000251	Shq1	76	60.183	ENSCVAG00000020049	shq1	70	60.577	Cyprinodon_variegatus
ENSPEMG00000000251	Shq1	76	59.268	ENSDARG00000058522	shq1	66	60.050	Danio_rerio
ENSPEMG00000000251	Shq1	100	86.066	ENSDNOG00000033937	SHQ1	100	76.950	Dasypus_novemcinctus
ENSPEMG00000000251	Shq1	89	84.158	ENSETEG00000005766	SHQ1	99	66.202	Echinops_telfairi
ENSPEMG00000000251	Shq1	69	57.463	ENSEBUG00000005445	shq1	69	51.780	Eptatretus_burgeri
ENSPEMG00000000251	Shq1	100	86.066	ENSEASG00005002237	SHQ1	100	78.893	Equus_asinus_asinus
ENSPEMG00000000251	Shq1	98	86.475	ENSECAG00000015673	SHQ1	96	78.307	Equus_caballus
ENSPEMG00000000251	Shq1	100	80.328	ENSEEUG00000010568	SHQ1	100	73.657	Erinaceus_europaeus
ENSPEMG00000000251	Shq1	80	56.769	ENSELUG00000003476	shq1	92	52.595	Esox_lucius
ENSPEMG00000000251	Shq1	100	86.885	ENSFCAG00000012781	SHQ1	100	77.487	Felis_catus
ENSPEMG00000000251	Shq1	99	68.852	ENSFALG00000013428	SHQ1	94	59.099	Ficedula_albicollis
ENSPEMG00000000251	Shq1	98	82.377	ENSFDAG00000005595	SHQ1	83	82.377	Fukomys_damarensis
ENSPEMG00000000251	Shq1	76	61.048	ENSFHEG00000017552	shq1	93	52.724	Fundulus_heteroclitus
ENSPEMG00000000251	Shq1	57	73.171	ENSGMOG00000007350	shq1	100	58.186	Gadus_morhua
ENSPEMG00000000251	Shq1	98	71.074	ENSGALG00000007798	SHQ1	93	61.014	Gallus_gallus
ENSPEMG00000000251	Shq1	57	75.610	ENSGACG00000011797	shq1	100	60.453	Gasterosteus_aculeatus
ENSPEMG00000000251	Shq1	98	84.426	ENSGGOG00000034818	SHQ1	98	76.842	Gorilla_gorilla
ENSPEMG00000000251	Shq1	76	58.352	ENSHBUG00000010857	shq1	65	60.500	Haplochromis_burtoni
ENSPEMG00000000251	Shq1	98	84.016	ENSHGLG00000003637	SHQ1	82	84.016	Heterocephalus_glaber_female
ENSPEMG00000000251	Shq1	98	84.016	ENSHGLG00100011957	SHQ1	82	84.016	Heterocephalus_glaber_male
ENSPEMG00000000251	Shq1	99	49.126	ENSHCOG00000010799	shq1	69	59.375	Hippocampus_comes
ENSPEMG00000000251	Shq1	71	66.250	ENSIPUG00000001247	shq1	70	60.911	Ictalurus_punctatus
ENSPEMG00000000251	Shq1	98	82.787	ENSSTOG00000010043	SHQ1	100	73.451	Ictidomys_tridecemlineatus
ENSPEMG00000000251	Shq1	98	85.656	ENSJJAG00000017611	Shq1	98	85.656	Jaculus_jaculus
ENSPEMG00000000251	Shq1	76	60.592	ENSKMAG00000004457	shq1	95	52.686	Kryptolebias_marmoratus
ENSPEMG00000000251	Shq1	98	64.898	ENSLACG00000014243	SHQ1	87	56.055	Latimeria_chalumnae
ENSPEMG00000000251	Shq1	78	63.820	ENSLOCG00000009970	shq1	96	55.814	Lepisosteus_oculatus
ENSPEMG00000000251	Shq1	100	84.426	ENSMFAG00000039148	SHQ1	100	76.034	Macaca_fascicularis
ENSPEMG00000000251	Shq1	98	56.714	ENSMFAG00000037396	-	98	57.067	Macaca_fascicularis
ENSPEMG00000000251	Shq1	90	82.653	ENSMMUG00000009571	SHQ1	96	74.624	Macaca_mulatta
ENSPEMG00000000251	Shq1	98	56.360	ENSMMUG00000021761	-	98	56.360	Macaca_mulatta
ENSPEMG00000000251	Shq1	100	84.426	ENSMNEG00000032667	SHQ1	100	76.034	Macaca_nemestrina
ENSPEMG00000000251	Shq1	100	84.016	ENSMLEG00000038493	SHQ1	100	76.552	Mandrillus_leucophaeus
ENSPEMG00000000251	Shq1	80	60.175	ENSMAMG00000023432	shq1	64	60.993	Mastacembelus_armatus
ENSPEMG00000000251	Shq1	76	58.581	ENSMZEG00005008649	shq1	65	60.750	Maylandia_zebra
ENSPEMG00000000251	Shq1	98	70.124	ENSMGAG00000009640	SHQ1	93	59.578	Meleagris_gallopavo
ENSPEMG00000000251	Shq1	100	94.672	ENSMAUG00000022030	Shq1	100	94.672	Mesocricetus_auratus
ENSPEMG00000000251	Shq1	98	84.898	ENSMICG00000009224	SHQ1	98	76.736	Microcebus_murinus
ENSPEMG00000000251	Shq1	100	95.902	ENSMOCG00000017836	Shq1	100	95.902	Microtus_ochrogaster
ENSPEMG00000000251	Shq1	78	58.597	ENSMMOG00000010569	shq1	52	76.190	Mola_mola
ENSPEMG00000000251	Shq1	96	69.262	ENSMODG00000003926	SHQ1	78	73.684	Monodelphis_domestica
ENSPEMG00000000251	Shq1	76	61.416	ENSMALG00000008870	shq1	68	62.110	Monopterus_albus
ENSPEMG00000000251	Shq1	100	94.672	MGP_CAROLIEiJ_G0028689	Shq1	100	94.672	Mus_caroli
ENSPEMG00000000251	Shq1	100	93.852	ENSMUSG00000035378	Shq1	100	93.852	Mus_musculus
ENSPEMG00000000251	Shq1	100	93.033	MGP_PahariEiJ_G0022440	Shq1	100	93.033	Mus_pahari
ENSPEMG00000000251	Shq1	100	92.623	MGP_SPRETEiJ_G0029717	Shq1	100	92.623	Mus_spretus
ENSPEMG00000000251	Shq1	100	84.836	ENSMPUG00000017006	SHQ1	98	76.817	Mustela_putorius_furo
ENSPEMG00000000251	Shq1	90	71.619	ENSMLUG00000013539	SHQ1	98	71.429	Myotis_lucifugus
ENSPEMG00000000251	Shq1	98	75.666	ENSNGAG00000023317	Shq1	99	75.488	Nannospalax_galili
ENSPEMG00000000251	Shq1	61	56.897	ENSNBRG00000024004	shq1	59	59.486	Neolamprologus_brichardi
ENSPEMG00000000251	Shq1	98	86.066	ENSNLEG00000002731	SHQ1	98	78.559	Nomascus_leucogenys
ENSPEMG00000000251	Shq1	83	66.667	ENSMEUG00000009350	-	89	66.667	Notamacropus_eugenii
ENSPEMG00000000251	Shq1	99	75.089	ENSODEG00000009192	SHQ1	98	83.613	Octodon_degus
ENSPEMG00000000251	Shq1	76	58.352	ENSONIG00000020264	shq1	65	60.500	Oreochromis_niloticus
ENSPEMG00000000251	Shq1	99	84.362	ENSOCUG00000016695	SHQ1	99	75.897	Oryctolagus_cuniculus
ENSPEMG00000000251	Shq1	76	59.028	ENSORLG00000023538	shq1	71	59.799	Oryzias_latipes
ENSPEMG00000000251	Shq1	76	59.954	ENSORLG00020003697	shq1	70	60.553	Oryzias_latipes_hni
ENSPEMG00000000251	Shq1	76	59.954	ENSORLG00015021040	shq1	71	60.553	Oryzias_latipes_hsok
ENSPEMG00000000251	Shq1	76	60.648	ENSOMEG00000001225	shq1	74	60.723	Oryzias_melastigma
ENSPEMG00000000251	Shq1	98	83.806	ENSOGAG00000003898	SHQ1	100	75.567	Otolemur_garnettii
ENSPEMG00000000251	Shq1	100	83.333	ENSOARG00000009547	SHQ1	100	74.701	Ovis_aries
ENSPEMG00000000251	Shq1	98	59.408	ENSPPAG00000043263	-	98	58.609	Pan_paniscus
ENSPEMG00000000251	Shq1	98	85.246	ENSPPAG00000027714	SHQ1	98	77.193	Pan_paniscus
ENSPEMG00000000251	Shq1	100	86.885	ENSPPRG00000004769	SHQ1	100	77.163	Panthera_pardus
ENSPEMG00000000251	Shq1	98	79.915	ENSPTIG00000011478	SHQ1	100	72.837	Panthera_tigris_altaica
ENSPEMG00000000251	Shq1	98	58.711	ENSPTRG00000048303	-	98	57.913	Pan_troglodytes
ENSPEMG00000000251	Shq1	98	85.246	ENSPTRG00000015106	SHQ1	98	77.193	Pan_troglodytes
ENSPEMG00000000251	Shq1	100	84.016	ENSPANG00000002881	SHQ1	100	77.069	Papio_anubis
ENSPEMG00000000251	Shq1	69	71.622	ENSPKIG00000021517	shq1	53	79.661	Paramormyrops_kingsleyae
ENSPEMG00000000251	Shq1	97	69.583	ENSPSIG00000005536	SHQ1	93	63.047	Pelodiscus_sinensis
ENSPEMG00000000251	Shq1	66	72.289	ENSPMGG00000008838	shq1	73	59.361	Periophthalmus_magnuspinnatus
ENSPEMG00000000251	Shq1	77	56.600	ENSPMAG00000005372	shq1	89	59.102	Petromyzon_marinus
ENSPEMG00000000251	Shq1	76	58.542	ENSPFOG00000003118	shq1	72	59.850	Poecilia_formosa
ENSPEMG00000000251	Shq1	61	56.609	ENSPMEG00000011076	shq1	67	58.387	Poecilia_mexicana
ENSPEMG00000000251	Shq1	69	54.657	ENSPREG00000000591	shq1	70	55.080	Poecilia_reticulata
ENSPEMG00000000251	Shq1	98	83.607	ENSPPYG00000013717	SHQ1	98	77.018	Pongo_abelii
ENSPEMG00000000251	Shq1	95	84.016	ENSPCAG00000009035	SHQ1	99	75.044	Procavia_capensis
ENSPEMG00000000251	Shq1	98	84.211	ENSPCOG00000008415	SHQ1	99	76.776	Propithecus_coquereli
ENSPEMG00000000251	Shq1	100	84.016	ENSPVAG00000017392	SHQ1	100	76.817	Pteropus_vampyrus
ENSPEMG00000000251	Shq1	76	58.581	ENSPNYG00000003878	shq1	65	60.750	Pundamilia_nyererei
ENSPEMG00000000251	Shq1	76	59.908	ENSPNAG00000026840	shq1	64	61.000	Pygocentrus_nattereri
ENSPEMG00000000251	Shq1	100	94.262	ENSRNOG00000005433	Shq1	100	85.075	Rattus_norvegicus
ENSPEMG00000000251	Shq1	99	78.400	ENSRBIG00000026280	SHQ1	100	72.870	Rhinopithecus_bieti
ENSPEMG00000000251	Shq1	99	84.016	ENSRROG00000034126	SHQ1	100	76.307	Rhinopithecus_roxellana
ENSPEMG00000000251	Shq1	98	68.458	ENSSBOG00000021038	SHQ1	98	70.088	Saimiri_boliviensis_boliviensis
ENSPEMG00000000251	Shq1	93	73.333	ENSSHAG00000015077	SHQ1	96	63.309	Sarcophilus_harrisii
ENSPEMG00000000251	Shq1	78	62.108	ENSSFOG00015016241	shq1	91	54.845	Scleropages_formosus
ENSPEMG00000000251	Shq1	77	62.613	ENSSMAG00000016151	shq1	72	63.063	Scophthalmus_maximus
ENSPEMG00000000251	Shq1	76	62.212	ENSSDUG00000011986	shq1	67	62.590	Seriola_dumerili
ENSPEMG00000000251	Shq1	73	61.353	ENSSLDG00000013908	shq1	67	62.077	Seriola_lalandi_dorsalis
ENSPEMG00000000251	Shq1	98	66.990	ENSSARG00000007119	SHQ1	98	62.257	Sorex_araneus
ENSPEMG00000000251	Shq1	75	67.763	ENSSPUG00000011526	-	87	60.341	Sphenodon_punctatus
ENSPEMG00000000251	Shq1	98	81.967	ENSSSCG00000011518	SHQ1	99	74.132	Sus_scrofa
ENSPEMG00000000251	Shq1	98	63.370	ENSTGUG00000009933	SHQ1	99	60.174	Taeniopygia_guttata
ENSPEMG00000000251	Shq1	66	69.492	ENSTRUG00000009446	shq1	76	56.674	Takifugu_rubripes
ENSPEMG00000000251	Shq1	73	55.288	ENSTNIG00000007354	shq1	90	56.115	Tetraodon_nigroviridis
ENSPEMG00000000251	Shq1	78	93.617	ENSTBEG00000011295	SHQ1	78	93.617	Tupaia_belangeri
ENSPEMG00000000251	Shq1	97	84.016	ENSTTRG00000005320	SHQ1	98	76.896	Tursiops_truncatus
ENSPEMG00000000251	Shq1	97	81.200	ENSUMAG00000024031	SHQ1	97	76.064	Ursus_maritimus
ENSPEMG00000000251	Shq1	92	63.415	ENSVPAG00000004880	SHQ1	100	65.103	Vicugna_pacos
ENSPEMG00000000251	Shq1	100	86.066	ENSVVUG00000013906	SHQ1	99	77.163	Vulpes_vulpes
ENSPEMG00000000251	Shq1	77	64.853	ENSXETG00000032215	shq1	72	64.853	Xenopus_tropicalis