EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000000275 (Gene tree)
Gene ID: 102917238
Gene Symbol: Trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 18028 bases
Position: chrKI615412.1:1378385-1396412
Accession: 102917238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000000376	TRM13	PF05206.14	1.2e-92	1	1
ENSPEMP00000000376	zf-U11-48K	PF05253.12	1.9e-09	1	1
ENSPEMP00000000376	zf-TRM13_CCCH	PF11722.8	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000000378	-	1771	XM_006977826	ENSPEMP00000000376	481 (aa)	XP_006977888	UPI00042A97E9

Gene Model

Click here to download ENSPEMG00000000275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000275	Trmt13	99	83.125	ENSG00000122435	TRMT13	99	83.125	Homo_sapiens
ENSPEMG00000000275	Trmt13	95	48.096	ENSAPOG00000015131	trmt13	99	48.297	Acanthochromis_polyacanthus
ENSPEMG00000000275	Trmt13	99	82.917	ENSAMEG00000008917	TRMT13	99	82.917	Ailuropoda_melanoleuca
ENSPEMG00000000275	Trmt13	98	51.240	ENSACIG00000005804	trmt13	95	51.702	Amphilophus_citrinellus
ENSPEMG00000000275	Trmt13	95	49.105	ENSAOCG00000023585	trmt13	99	49.501	Amphiprion_ocellaris
ENSPEMG00000000275	Trmt13	95	49.105	ENSAPEG00000004025	trmt13	99	49.105	Amphiprion_percula
ENSPEMG00000000275	Trmt13	98	50.830	ENSATEG00000006597	trmt13	98	50.830	Anabas_testudineus
ENSPEMG00000000275	Trmt13	88	65.808	ENSAPLG00000014924	TRMT13	99	65.808	Anas_platyrhynchos
ENSPEMG00000000275	Trmt13	95	62.745	ENSACAG00000003498	TRMT13	97	62.745	Anolis_carolinensis
ENSPEMG00000000275	Trmt13	99	84.167	ENSANAG00000019525	TRMT13	100	84.404	Aotus_nancymaae
ENSPEMG00000000275	Trmt13	98	53.027	ENSACLG00000020018	trmt13	99	53.027	Astatotilapia_calliptera
ENSPEMG00000000275	Trmt13	95	55.032	ENSAMXG00000017963	trmt13	97	55.437	Astyanax_mexicanus
ENSPEMG00000000275	Trmt13	99	82.083	ENSBTAG00000015781	TRMT13	99	82.083	Bos_taurus
ENSPEMG00000000275	Trmt13	99	82.708	ENSCJAG00000000200	TRMT13	99	84.404	Callithrix_jacchus
ENSPEMG00000000275	Trmt13	65	81.210	ENSCAFG00000020021	TRMT13	99	81.210	Canis_familiaris
ENSPEMG00000000275	Trmt13	57	87.132	ENSCAFG00020011572	TRMT13	94	87.132	Canis_lupus_dingo
ENSPEMG00000000275	Trmt13	99	81.875	ENSCHIG00000015395	TRMT13	99	81.875	Capra_hircus
ENSPEMG00000000275	Trmt13	98	78.013	ENSTSYG00000010811	TRMT13	98	84.848	Carlito_syrichta
ENSPEMG00000000275	Trmt13	75	63.912	ENSCAPG00000009085	TRMT13	100	64.463	Cavia_aperea
ENSPEMG00000000275	Trmt13	99	82.500	ENSCPOG00000000694	TRMT13	99	82.500	Cavia_porcellus
ENSPEMG00000000275	Trmt13	99	83.750	ENSCCAG00000023772	TRMT13	100	83.486	Cebus_capucinus
ENSPEMG00000000275	Trmt13	99	83.958	ENSCATG00000033556	TRMT13	100	83.486	Cercocebus_atys
ENSPEMG00000000275	Trmt13	89	78.638	ENSCLAG00000008220	TRMT13	99	79.343	Chinchilla_lanigera
ENSPEMG00000000275	Trmt13	99	83.750	ENSCSAG00000001506	TRMT13	99	83.750	Chlorocebus_sabaeus
ENSPEMG00000000275	Trmt13	96	68.615	ENSCPBG00000026671	TRMT13	96	68.615	Chrysemys_picta_bellii
ENSPEMG00000000275	Trmt13	99	83.958	ENSCANG00000034659	TRMT13	100	84.404	Colobus_angolensis_palliatus
ENSPEMG00000000275	Trmt13	100	89.627	ENSCGRG00001021601	Trmt13	100	89.627	Cricetulus_griseus_chok1gshd
ENSPEMG00000000275	Trmt13	54	86.434	ENSCGRG00000000093	-	99	86.434	Cricetulus_griseus_crigri
ENSPEMG00000000275	Trmt13	97	49.684	ENSCSEG00000000591	trmt13	99	49.684	Cynoglossus_semilaevis
ENSPEMG00000000275	Trmt13	95	49.266	ENSCVAG00000017342	trmt13	93	49.266	Cyprinodon_variegatus
ENSPEMG00000000275	Trmt13	95	56.087	ENSDARG00000102846	trmt13	96	56.087	Danio_rerio
ENSPEMG00000000275	Trmt13	57	84.058	ENSDNOG00000001710	TRMT13	84	84.058	Dasypus_novemcinctus
ENSPEMG00000000275	Trmt13	99	81.092	ENSDORG00000015808	Trmt13	99	81.092	Dipodomys_ordii
ENSPEMG00000000275	Trmt13	95	31.743	FBgn0037435	CG18048	94	31.743	Drosophila_melanogaster
ENSPEMG00000000275	Trmt13	99	70.355	ENSETEG00000005819	TRMT13	99	70.355	Echinops_telfairi
ENSPEMG00000000275	Trmt13	94	44.035	ENSEBUG00000014444	trmt13	96	44.968	Eptatretus_burgeri
ENSPEMG00000000275	Trmt13	99	83.958	ENSEASG00005015918	TRMT13	99	83.958	Equus_asinus_asinus
ENSPEMG00000000275	Trmt13	99	83.542	ENSECAG00000022626	TRMT13	99	83.542	Equus_caballus
ENSPEMG00000000275	Trmt13	76	77.451	ENSEEUG00000000294	TRMT13	77	77.451	Erinaceus_europaeus
ENSPEMG00000000275	Trmt13	97	55.297	ENSELUG00000003803	trmt13	99	55.297	Esox_lucius
ENSPEMG00000000275	Trmt13	99	83.542	ENSFCAG00000030618	TRMT13	100	87.156	Felis_catus
ENSPEMG00000000275	Trmt13	98	63.907	ENSFALG00000002424	TRMT13	98	63.907	Ficedula_albicollis
ENSPEMG00000000275	Trmt13	99	84.519	ENSFDAG00000006342	TRMT13	99	84.519	Fukomys_damarensis
ENSPEMG00000000275	Trmt13	77	51.042	ENSFHEG00000022954	trmt13	97	51.372	Fundulus_heteroclitus
ENSPEMG00000000275	Trmt13	95	49.890	ENSGMOG00000013223	trmt13	100	50.110	Gadus_morhua
ENSPEMG00000000275	Trmt13	96	63.578	ENSGALG00000005290	TRMT13	99	62.292	Gallus_gallus
ENSPEMG00000000275	Trmt13	75	51.075	ENSGAFG00000001577	trmt13	81	51.075	Gambusia_affinis
ENSPEMG00000000275	Trmt13	97	49.895	ENSGACG00000013428	trmt13	98	51.282	Gasterosteus_aculeatus
ENSPEMG00000000275	Trmt13	96	69.330	ENSGAGG00000023303	TRMT13	95	74.427	Gopherus_agassizii
ENSPEMG00000000275	Trmt13	99	82.917	ENSGGOG00000005616	TRMT13	99	82.917	Gorilla_gorilla
ENSPEMG00000000275	Trmt13	98	53.445	ENSHBUG00000007754	trmt13	99	53.445	Haplochromis_burtoni
ENSPEMG00000000275	Trmt13	99	86.611	ENSHGLG00000002164	TRMT13	99	86.611	Heterocephalus_glaber_female
ENSPEMG00000000275	Trmt13	99	86.611	ENSHGLG00100001618	TRMT13	99	86.611	Heterocephalus_glaber_male
ENSPEMG00000000275	Trmt13	95	48.253	ENSHCOG00000020553	trmt13	96	48.253	Hippocampus_comes
ENSPEMG00000000275	Trmt13	97	55.745	ENSIPUG00000024787	trmt13	99	55.745	Ictalurus_punctatus
ENSPEMG00000000275	Trmt13	99	84.792	ENSSTOG00000013483	TRMT13	100	84.792	Ictidomys_tridecemlineatus
ENSPEMG00000000275	Trmt13	98	83.652	ENSJJAG00000018012	Trmt13	99	83.652	Jaculus_jaculus
ENSPEMG00000000275	Trmt13	64	50.314	ENSKMAG00000007639	trmt13	92	51.148	Kryptolebias_marmoratus
ENSPEMG00000000275	Trmt13	95	51.363	ENSLBEG00000020238	trmt13	99	51.261	Labrus_bergylta
ENSPEMG00000000275	Trmt13	96	60.341	ENSLACG00000013153	TRMT13	99	59.500	Latimeria_chalumnae
ENSPEMG00000000275	Trmt13	95	59.002	ENSLOCG00000000418	trmt13	97	60.087	Lepisosteus_oculatus
ENSPEMG00000000275	Trmt13	77	80.811	ENSLAFG00000002383	TRMT13	100	80.811	Loxodonta_africana
ENSPEMG00000000275	Trmt13	99	83.542	ENSMFAG00000034681	TRMT13	100	84.404	Macaca_fascicularis
ENSPEMG00000000275	Trmt13	99	83.542	ENSMMUG00000004243	TRMT13	100	84.404	Macaca_mulatta
ENSPEMG00000000275	Trmt13	99	83.542	ENSMNEG00000036102	TRMT13	100	84.404	Macaca_nemestrina
ENSPEMG00000000275	Trmt13	99	84.375	ENSMLEG00000034258	TRMT13	100	85.321	Mandrillus_leucophaeus
ENSPEMG00000000275	Trmt13	95	52.575	ENSMAMG00000016597	trmt13	96	52.575	Mastacembelus_armatus
ENSPEMG00000000275	Trmt13	98	52.818	ENSMZEG00005020959	trmt13	99	52.818	Maylandia_zebra
ENSPEMG00000000275	Trmt13	88	66.194	ENSMGAG00000006970	TRMT13	99	66.194	Meleagris_gallopavo
ENSPEMG00000000275	Trmt13	100	88.565	ENSMAUG00000010448	Trmt13	99	88.565	Mesocricetus_auratus
ENSPEMG00000000275	Trmt13	99	83.958	ENSMICG00000005283	TRMT13	100	85.321	Microcebus_murinus
ENSPEMG00000000275	Trmt13	99	88.333	ENSMOCG00000019914	Trmt13	99	88.333	Microtus_ochrogaster
ENSPEMG00000000275	Trmt13	54	50.943	ENSMMOG00000007762	trmt13	89	50.943	Mola_mola
ENSPEMG00000000275	Trmt13	99	71.281	ENSMODG00000003646	TRMT13	99	71.281	Monodelphis_domestica
ENSPEMG00000000275	Trmt13	99	50.000	ENSMALG00000020965	trmt13	99	50.000	Monopterus_albus
ENSPEMG00000000275	Trmt13	99	88.285	MGP_CAROLIEiJ_G0025568	Trmt13	99	88.285	Mus_caroli
ENSPEMG00000000275	Trmt13	99	88.075	ENSMUSG00000033439	Trmt13	99	88.075	Mus_musculus
ENSPEMG00000000275	Trmt13	99	87.866	MGP_PahariEiJ_G0027014	Trmt13	99	87.866	Mus_pahari
ENSPEMG00000000275	Trmt13	99	88.494	MGP_SPRETEiJ_G0026518	Trmt13	99	88.494	Mus_spretus
ENSPEMG00000000275	Trmt13	79	79.737	ENSMPUG00000002078	-	99	79.737	Mustela_putorius_furo
ENSPEMG00000000275	Trmt13	99	76.618	ENSMLUG00000002124	TRMT13	99	76.618	Myotis_lucifugus
ENSPEMG00000000275	Trmt13	98	48.745	ENSNBRG00000006783	trmt13	95	50.325	Neolamprologus_brichardi
ENSPEMG00000000275	Trmt13	99	83.125	ENSNLEG00000035917	TRMT13	100	82.569	Nomascus_leucogenys
ENSPEMG00000000275	Trmt13	51	70.161	ENSMEUG00000013346	-	100	70.161	Notamacropus_eugenii
ENSPEMG00000000275	Trmt13	67	89.338	ENSOPRG00000012048	TRMT13	67	89.338	Ochotona_princeps
ENSPEMG00000000275	Trmt13	98	51.235	ENSONIG00000004574	trmt13	98	53.648	Oreochromis_niloticus
ENSPEMG00000000275	Trmt13	89	69.606	ENSOANG00000012057	TRMT13	99	69.606	Ornithorhynchus_anatinus
ENSPEMG00000000275	Trmt13	99	82.917	ENSOCUG00000023095	TRMT13	100	82.917	Oryctolagus_cuniculus
ENSPEMG00000000275	Trmt13	96	47.679	ENSORLG00000003320	trmt13	99	48.101	Oryzias_latipes
ENSPEMG00000000275	Trmt13	95	47.323	ENSORLG00020005972	trmt13	97	46.753	Oryzias_latipes_hni
ENSPEMG00000000275	Trmt13	96	50.636	ENSORLG00015002270	trmt13	99	51.271	Oryzias_latipes_hsok
ENSPEMG00000000275	Trmt13	97	51.271	ENSOMEG00000006724	trmt13	95	51.483	Oryzias_melastigma
ENSPEMG00000000275	Trmt13	98	84.355	ENSOGAG00000005618	TRMT13	96	84.100	Otolemur_garnettii
ENSPEMG00000000275	Trmt13	99	81.875	ENSOARG00000017983	TRMT13	99	81.875	Ovis_aries
ENSPEMG00000000275	Trmt13	99	82.917	ENSPPAG00000043736	TRMT13	99	82.917	Pan_paniscus
ENSPEMG00000000275	Trmt13	99	83.750	ENSPPRG00000003424	TRMT13	100	87.156	Panthera_pardus
ENSPEMG00000000275	Trmt13	99	83.750	ENSPTIG00000018598	TRMT13	100	87.156	Panthera_tigris_altaica
ENSPEMG00000000275	Trmt13	99	82.917	ENSPTRG00000001001	TRMT13	99	82.917	Pan_troglodytes
ENSPEMG00000000275	Trmt13	99	83.958	ENSPANG00000007598	TRMT13	100	84.412	Papio_anubis
ENSPEMG00000000275	Trmt13	96	55.217	ENSPKIG00000001514	trmt13	98	55.217	Paramormyrops_kingsleyae
ENSPEMG00000000275	Trmt13	86	66.906	ENSPSIG00000012703	TRMT13	99	66.906	Pelodiscus_sinensis
ENSPEMG00000000275	Trmt13	97	51.702	ENSPMGG00000013298	trmt13	94	51.702	Periophthalmus_magnuspinnatus
ENSPEMG00000000275	Trmt13	95	46.639	ENSPMAG00000000823	trmt13	97	46.639	Petromyzon_marinus
ENSPEMG00000000275	Trmt13	99	73.013	ENSPCIG00000007699	TRMT13	99	73.640	Phascolarctos_cinereus
ENSPEMG00000000275	Trmt13	98	49.894	ENSPFOG00000008675	trmt13	98	49.894	Poecilia_formosa
ENSPEMG00000000275	Trmt13	95	49.257	ENSPLAG00000009709	trmt13	99	49.257	Poecilia_latipinna
ENSPEMG00000000275	Trmt13	95	48.195	ENSPMEG00000022954	trmt13	99	48.195	Poecilia_mexicana
ENSPEMG00000000275	Trmt13	77	50.262	ENSPREG00000005645	trmt13	91	49.281	Poecilia_reticulata
ENSPEMG00000000275	Trmt13	99	83.333	ENSPPYG00000001120	TRMT13	99	83.333	Pongo_abelii
ENSPEMG00000000275	Trmt13	99	81.837	ENSPCAG00000002340	TRMT13	99	81.837	Procavia_capensis
ENSPEMG00000000275	Trmt13	99	84.167	ENSPCOG00000017984	TRMT13	100	86.239	Propithecus_coquereli
ENSPEMG00000000275	Trmt13	99	82.708	ENSPVAG00000017430	TRMT13	99	82.708	Pteropus_vampyrus
ENSPEMG00000000275	Trmt13	98	51.992	ENSPNYG00000013690	trmt13	99	51.992	Pundamilia_nyererei
ENSPEMG00000000275	Trmt13	97	54.968	ENSPNAG00000022130	trmt13	99	54.968	Pygocentrus_nattereri
ENSPEMG00000000275	Trmt13	100	87.526	ENSRNOG00000015140	Trmt13	97	87.526	Rattus_norvegicus
ENSPEMG00000000275	Trmt13	99	83.958	ENSRBIG00000037686	TRMT13	100	84.404	Rhinopithecus_bieti
ENSPEMG00000000275	Trmt13	99	83.958	ENSRROG00000044057	TRMT13	100	84.404	Rhinopithecus_roxellana
ENSPEMG00000000275	Trmt13	99	83.958	ENSSBOG00000026541	TRMT13	100	84.404	Saimiri_boliviensis_boliviensis
ENSPEMG00000000275	Trmt13	91	72.936	ENSSHAG00000005213	TRMT13	97	72.936	Sarcophilus_harrisii
ENSPEMG00000000275	Trmt13	96	53.814	ENSSFOG00015017560	trmt13	98	53.814	Scleropages_formosus
ENSPEMG00000000275	Trmt13	97	49.375	ENSSMAG00000014592	trmt13	97	49.375	Scophthalmus_maximus
ENSPEMG00000000275	Trmt13	95	50.630	ENSSDUG00000015508	trmt13	97	50.103	Seriola_dumerili
ENSPEMG00000000275	Trmt13	95	50.734	ENSSLDG00000019060	trmt13	96	50.734	Seriola_lalandi_dorsalis
ENSPEMG00000000275	Trmt13	96	71.304	ENSSARG00000010344	TRMT13	97	71.304	Sorex_araneus
ENSPEMG00000000275	Trmt13	95	66.521	ENSSPUG00000016339	TRMT13	99	66.521	Sphenodon_punctatus
ENSPEMG00000000275	Trmt13	95	52.677	ENSSPAG00000011922	trmt13	98	52.542	Stegastes_partitus
ENSPEMG00000000275	Trmt13	99	82.500	ENSSSCG00000006869	TRMT13	99	82.500	Sus_scrofa
ENSPEMG00000000275	Trmt13	95	65.721	ENSTGUG00000005253	TRMT13	98	65.721	Taeniopygia_guttata
ENSPEMG00000000275	Trmt13	95	49.471	ENSTRUG00000008400	trmt13	98	49.471	Takifugu_rubripes
ENSPEMG00000000275	Trmt13	86	67.952	ENSTBEG00000008911	TRMT13	99	67.952	Tupaia_belangeri
ENSPEMG00000000275	Trmt13	51	94.737	ENSTTRG00000015302	-	60	94.737	Tursiops_truncatus
ENSPEMG00000000275	Trmt13	99	78.586	ENSUAMG00000017251	TRMT13	99	78.586	Ursus_americanus
ENSPEMG00000000275	Trmt13	99	83.125	ENSUMAG00000007901	TRMT13	99	83.527	Ursus_maritimus
ENSPEMG00000000275	Trmt13	90	65.893	ENSVPAG00000001034	TRMT13	100	65.893	Vicugna_pacos
ENSPEMG00000000275	Trmt13	99	83.264	ENSVVUG00000021996	TRMT13	99	83.264	Vulpes_vulpes
ENSPEMG00000000275	Trmt13	97	57.511	ENSXETG00000013204	trmt13	98	57.511	Xenopus_tropicalis
ENSPEMG00000000275	Trmt13	95	48.936	ENSXMAG00000010765	trmt13	99	48.936	Xiphophorus_maculatus