EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000000278 (Gene tree)
Gene ID: 102927221
Gene Symbol: Rpusd4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 9110 bases
Position: chrKI615445.1:2902841-2911950
Accession: 102927221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000000389	PseudoU_synth_2	PF00849.22	1.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000000391	-	1068	XM_015998397	ENSPEMP00000000389	355 (aa)	XP_015853883	-

Gene Model

Click here to download ENSPEMG00000000278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000278	Rpusd4	100	73.740	ENSG00000165526	RPUSD4	100	73.740	Homo_sapiens
ENSPEMG00000000278	Rpusd4	83	45.092	ENSAPOG00000011024	rpusd4	81	45.092	Acanthochromis_polyacanthus
ENSPEMG00000000278	Rpusd4	100	74.005	ENSAMEG00000000127	-	100	74.005	Ailuropoda_melanoleuca
ENSPEMG00000000278	Rpusd4	82	54.266	ENSAMEG00000005953	-	100	54.266	Ailuropoda_melanoleuca
ENSPEMG00000000278	Rpusd4	88	42.899	ENSACIG00000003533	rpusd4	98	42.899	Amphilophus_citrinellus
ENSPEMG00000000278	Rpusd4	88	44.543	ENSAOCG00000015409	rpusd4	83	44.543	Amphiprion_ocellaris
ENSPEMG00000000278	Rpusd4	88	45.133	ENSAPEG00000018935	rpusd4	83	45.133	Amphiprion_percula
ENSPEMG00000000278	Rpusd4	88	44.444	ENSATEG00000008059	rpusd4	84	44.444	Anabas_testudineus
ENSPEMG00000000278	Rpusd4	72	52.330	ENSAPLG00000013250	RPUSD4	99	51.525	Anas_platyrhynchos
ENSPEMG00000000278	Rpusd4	97	53.533	ENSACAG00000000189	RPUSD4	100	53.533	Anolis_carolinensis
ENSPEMG00000000278	Rpusd4	99	72.849	ENSANAG00000024050	RPUSD4	100	72.849	Aotus_nancymaae
ENSPEMG00000000278	Rpusd4	85	45.593	ENSACLG00000020996	rpusd4	84	45.593	Astatotilapia_calliptera
ENSPEMG00000000278	Rpusd4	96	40.650	ENSAMXG00000031479	rpusd4	96	41.813	Astyanax_mexicanus
ENSPEMG00000000278	Rpusd4	100	68.783	ENSBTAG00000020900	RPUSD4	100	68.783	Bos_taurus
ENSPEMG00000000278	Rpusd4	98	73.514	ENSCJAG00000042850	RPUSD4	93	73.514	Callithrix_jacchus
ENSPEMG00000000278	Rpusd4	100	73.280	ENSCAFG00000010488	RPUSD4	100	73.280	Canis_familiaris
ENSPEMG00000000278	Rpusd4	100	73.280	ENSCAFG00020010621	RPUSD4	100	73.280	Canis_lupus_dingo
ENSPEMG00000000278	Rpusd4	100	68.338	ENSCHIG00000009975	RPUSD4	100	68.338	Capra_hircus
ENSPEMG00000000278	Rpusd4	100	74.005	ENSTSYG00000008456	RPUSD4	100	74.005	Carlito_syrichta
ENSPEMG00000000278	Rpusd4	66	72.000	ENSCAPG00000006040	RPUSD4	100	72.000	Cavia_aperea
ENSPEMG00000000278	Rpusd4	100	71.353	ENSCPOG00000014971	RPUSD4	100	71.353	Cavia_porcellus
ENSPEMG00000000278	Rpusd4	99	73.656	ENSCCAG00000027838	RPUSD4	100	73.656	Cebus_capucinus
ENSPEMG00000000278	Rpusd4	100	73.210	ENSCATG00000041570	RPUSD4	100	73.210	Cercocebus_atys
ENSPEMG00000000278	Rpusd4	100	73.475	ENSCLAG00000016553	RPUSD4	100	73.475	Chinchilla_lanigera
ENSPEMG00000000278	Rpusd4	100	73.210	ENSCSAG00000002274	RPUSD4	100	73.210	Chlorocebus_sabaeus
ENSPEMG00000000278	Rpusd4	74	74.205	ENSCHOG00000010249	RPUSD4	100	74.205	Choloepus_hoffmanni
ENSPEMG00000000278	Rpusd4	74	60.702	ENSCPBG00000011175	RPUSD4	98	60.702	Chrysemys_picta_bellii
ENSPEMG00000000278	Rpusd4	70	34.173	ENSCSAVG00000000872	-	54	34.173	Ciona_savignyi
ENSPEMG00000000278	Rpusd4	100	72.149	ENSCANG00000039684	RPUSD4	100	72.149	Colobus_angolensis_palliatus
ENSPEMG00000000278	Rpusd4	100	84.881	ENSCGRG00001024141	Rpusd4	100	84.881	Cricetulus_griseus_chok1gshd
ENSPEMG00000000278	Rpusd4	100	84.881	ENSCGRG00000014415	Rpusd4	100	84.881	Cricetulus_griseus_crigri
ENSPEMG00000000278	Rpusd4	50	46.111	ENSCSEG00000006462	-	78	46.111	Cynoglossus_semilaevis
ENSPEMG00000000278	Rpusd4	87	45.266	ENSCVAG00000008761	rpusd4	86	45.266	Cyprinodon_variegatus
ENSPEMG00000000278	Rpusd4	87	45.562	ENSCVAG00000000392	rpusd4	95	45.562	Cyprinodon_variegatus
ENSPEMG00000000278	Rpusd4	92	41.880	ENSDARG00000012674	rpusd4	97	41.880	Danio_rerio
ENSPEMG00000000278	Rpusd4	100	70.292	ENSDNOG00000020026	RPUSD4	100	70.292	Dasypus_novemcinctus
ENSPEMG00000000278	Rpusd4	100	74.536	ENSDORG00000016717	Rpusd4	100	74.536	Dipodomys_ordii
ENSPEMG00000000278	Rpusd4	97	71.196	ENSETEG00000013953	RPUSD4	98	71.196	Echinops_telfairi
ENSPEMG00000000278	Rpusd4	100	74.271	ENSEASG00005022982	RPUSD4	100	74.271	Equus_asinus_asinus
ENSPEMG00000000278	Rpusd4	100	73.740	ENSECAG00000000557	RPUSD4	100	73.740	Equus_caballus
ENSPEMG00000000278	Rpusd4	79	68.644	ENSEEUG00000014036	RPUSD4	80	68.644	Erinaceus_europaeus
ENSPEMG00000000278	Rpusd4	90	47.042	ENSELUG00000008075	rpusd4	93	47.042	Esox_lucius
ENSPEMG00000000278	Rpusd4	100	74.536	ENSFCAG00000029789	RPUSD4	100	74.536	Felis_catus
ENSPEMG00000000278	Rpusd4	89	50.442	ENSFALG00000005171	RPUSD4	99	50.442	Ficedula_albicollis
ENSPEMG00000000278	Rpusd4	100	72.944	ENSFDAG00000014307	RPUSD4	100	72.944	Fukomys_damarensis
ENSPEMG00000000278	Rpusd4	88	44.412	ENSFHEG00000004329	rpusd4	88	44.412	Fundulus_heteroclitus
ENSPEMG00000000278	Rpusd4	85	44.479	ENSGMOG00000017726	rpusd4	96	44.343	Gadus_morhua
ENSPEMG00000000278	Rpusd4	73	53.546	ENSGALG00000024326	RPUSD4	99	48.451	Gallus_gallus
ENSPEMG00000000278	Rpusd4	86	43.195	ENSGAFG00000021559	rpusd4	86	43.195	Gambusia_affinis
ENSPEMG00000000278	Rpusd4	88	42.647	ENSGACG00000001657	rpusd4	100	42.647	Gasterosteus_aculeatus
ENSPEMG00000000278	Rpusd4	94	56.145	ENSGAGG00000000132	RPUSD4	98	56.145	Gopherus_agassizii
ENSPEMG00000000278	Rpusd4	100	72.944	ENSGGOG00000016494	RPUSD4	100	72.944	Gorilla_gorilla
ENSPEMG00000000278	Rpusd4	85	45.593	ENSHBUG00000022838	rpusd4	84	45.593	Haplochromis_burtoni
ENSPEMG00000000278	Rpusd4	100	74.801	ENSHGLG00000002285	RPUSD4	100	74.801	Heterocephalus_glaber_female
ENSPEMG00000000278	Rpusd4	100	74.801	ENSHGLG00100006385	RPUSD4	100	74.801	Heterocephalus_glaber_male
ENSPEMG00000000278	Rpusd4	85	44.817	ENSHCOG00000006612	rpusd4	83	44.817	Hippocampus_comes
ENSPEMG00000000278	Rpusd4	85	46.037	ENSIPUG00000023879	rusd4	85	46.037	Ictalurus_punctatus
ENSPEMG00000000278	Rpusd4	96	74.176	ENSSTOG00000025280	RPUSD4	100	74.176	Ictidomys_tridecemlineatus
ENSPEMG00000000278	Rpusd4	99	77.419	ENSJJAG00000018673	Rpusd4	100	77.419	Jaculus_jaculus
ENSPEMG00000000278	Rpusd4	86	44.311	ENSKMAG00000021805	rpusd4	86	44.311	Kryptolebias_marmoratus
ENSPEMG00000000278	Rpusd4	85	45.122	ENSLBEG00000020394	rpusd4	91	45.122	Labrus_bergylta
ENSPEMG00000000278	Rpusd4	85	53.231	ENSLACG00000011028	RPUSD4	94	49.867	Latimeria_chalumnae
ENSPEMG00000000278	Rpusd4	86	48.125	ENSLOCG00000003124	rpusd4	88	48.125	Lepisosteus_oculatus
ENSPEMG00000000278	Rpusd4	100	72.414	ENSLAFG00000005211	RPUSD4	100	72.414	Loxodonta_africana
ENSPEMG00000000278	Rpusd4	100	73.210	ENSMFAG00000039513	RPUSD4	100	73.210	Macaca_fascicularis
ENSPEMG00000000278	Rpusd4	100	73.210	ENSMMUG00000007933	RPUSD4	100	73.210	Macaca_mulatta
ENSPEMG00000000278	Rpusd4	100	72.944	ENSMNEG00000027414	RPUSD4	100	72.944	Macaca_nemestrina
ENSPEMG00000000278	Rpusd4	100	72.679	ENSMLEG00000042461	RPUSD4	100	72.679	Mandrillus_leucophaeus
ENSPEMG00000000278	Rpusd4	86	42.388	ENSMAMG00000023839	rpusd4	86	42.388	Mastacembelus_armatus
ENSPEMG00000000278	Rpusd4	85	45.593	ENSMZEG00005011999	rpusd4	84	45.593	Maylandia_zebra
ENSPEMG00000000278	Rpusd4	72	51.429	ENSMGAG00000000840	RPUSD4	99	50.000	Meleagris_gallopavo
ENSPEMG00000000278	Rpusd4	100	81.698	ENSMAUG00000010280	Rpusd4	100	81.698	Mesocricetus_auratus
ENSPEMG00000000278	Rpusd4	100	74.005	ENSMICG00000015979	RPUSD4	100	74.005	Microcebus_murinus
ENSPEMG00000000278	Rpusd4	100	81.432	ENSMOCG00000000661	Rpusd4	100	81.432	Microtus_ochrogaster
ENSPEMG00000000278	Rpusd4	77	46.154	ENSMMOG00000021731	rpusd4	88	46.154	Mola_mola
ENSPEMG00000000278	Rpusd4	86	69.113	ENSMODG00000004521	RPUSD4	84	69.113	Monodelphis_domestica
ENSPEMG00000000278	Rpusd4	79	44.481	ENSMALG00000005839	rpusd4	98	43.519	Monopterus_albus
ENSPEMG00000000278	Rpusd4	100	80.637	MGP_CAROLIEiJ_G0031954	Rpusd4	100	80.637	Mus_caroli
ENSPEMG00000000278	Rpusd4	100	80.637	ENSMUSG00000032044	Rpusd4	100	80.637	Mus_musculus
ENSPEMG00000000278	Rpusd4	100	80.637	MGP_PahariEiJ_G0014819	Rpusd4	100	80.637	Mus_pahari
ENSPEMG00000000278	Rpusd4	100	80.371	MGP_SPRETEiJ_G0033078	Rpusd4	100	80.371	Mus_spretus
ENSPEMG00000000278	Rpusd4	99	72.922	ENSMPUG00000006608	RPUSD4	99	72.922	Mustela_putorius_furo
ENSPEMG00000000278	Rpusd4	65	74.016	ENSMLUG00000029348	-	100	74.016	Myotis_lucifugus
ENSPEMG00000000278	Rpusd4	91	75.216	ENSMLUG00000017328	-	98	72.000	Myotis_lucifugus
ENSPEMG00000000278	Rpusd4	99	76.408	ENSNGAG00000020847	Rpusd4	99	76.408	Nannospalax_galili
ENSPEMG00000000278	Rpusd4	85	45.289	ENSNBRG00000005207	rpusd4	95	45.289	Neolamprologus_brichardi
ENSPEMG00000000278	Rpusd4	100	74.271	ENSNLEG00000007465	RPUSD4	100	74.271	Nomascus_leucogenys
ENSPEMG00000000278	Rpusd4	98	63.514	ENSMEUG00000004370	RPUSD4	99	63.514	Notamacropus_eugenii
ENSPEMG00000000278	Rpusd4	58	85.616	ENSOPRG00000013141	-	78	85.616	Ochotona_princeps
ENSPEMG00000000278	Rpusd4	100	72.679	ENSODEG00000004577	RPUSD4	100	72.679	Octodon_degus
ENSPEMG00000000278	Rpusd4	93	44.444	ENSONIG00000018879	rpusd4	96	44.444	Oreochromis_niloticus
ENSPEMG00000000278	Rpusd4	76	60.678	ENSOANG00000007247	RPUSD4	100	58.786	Ornithorhynchus_anatinus
ENSPEMG00000000278	Rpusd4	98	73.118	ENSOCUG00000017039	RPUSD4	98	73.118	Oryctolagus_cuniculus
ENSPEMG00000000278	Rpusd4	92	42.416	ENSORLG00000002750	rpusd4	92	42.529	Oryzias_latipes
ENSPEMG00000000278	Rpusd4	75	44.558	ENSORLG00020002044	rpusd4	73	44.558	Oryzias_latipes_hni
ENSPEMG00000000278	Rpusd4	84	43.077	ENSORLG00015020034	rpusd4	81	43.077	Oryzias_latipes_hsok
ENSPEMG00000000278	Rpusd4	90	43.391	ENSOMEG00000004861	rpusd4	85	43.391	Oryzias_melastigma
ENSPEMG00000000278	Rpusd4	100	72.487	ENSOGAG00000008922	RPUSD4	100	72.487	Otolemur_garnettii
ENSPEMG00000000278	Rpusd4	97	68.378	ENSOARG00000012238	RPUSD4	99	67.989	Ovis_aries
ENSPEMG00000000278	Rpusd4	100	74.005	ENSPPAG00000042883	RPUSD4	93	74.005	Pan_paniscus
ENSPEMG00000000278	Rpusd4	100	74.801	ENSPPRG00000003081	RPUSD4	100	74.801	Panthera_pardus
ENSPEMG00000000278	Rpusd4	100	74.801	ENSPTIG00000012059	RPUSD4	100	74.801	Panthera_tigris_altaica
ENSPEMG00000000278	Rpusd4	100	73.740	ENSPTRG00000004454	RPUSD4	100	73.740	Pan_troglodytes
ENSPEMG00000000278	Rpusd4	100	73.475	ENSPANG00000015040	RPUSD4	100	73.475	Papio_anubis
ENSPEMG00000000278	Rpusd4	87	50.599	ENSPKIG00000023986	rpusd4	85	50.599	Paramormyrops_kingsleyae
ENSPEMG00000000278	Rpusd4	78	59.667	ENSPSIG00000014268	RPUSD4	95	59.667	Pelodiscus_sinensis
ENSPEMG00000000278	Rpusd4	85	43.465	ENSPMGG00000002806	rpusd4	91	42.988	Periophthalmus_magnuspinnatus
ENSPEMG00000000278	Rpusd4	80	39.053	ENSPMAG00000008183	rpusd4	98	39.053	Petromyzon_marinus
ENSPEMG00000000278	Rpusd4	96	64.835	ENSPCIG00000010212	RPUSD4	100	64.835	Phascolarctos_cinereus
ENSPEMG00000000278	Rpusd4	87	44.152	ENSPFOG00000019030	rpusd4	89	44.152	Poecilia_formosa
ENSPEMG00000000278	Rpusd4	87	45.000	ENSPLAG00000016848	rpusd4	86	45.000	Poecilia_latipinna
ENSPEMG00000000278	Rpusd4	87	43.824	ENSPMEG00000017534	rpusd4	86	43.824	Poecilia_mexicana
ENSPEMG00000000278	Rpusd4	82	45.062	ENSPREG00000005689	rpusd4	83	45.062	Poecilia_reticulata
ENSPEMG00000000278	Rpusd4	100	74.005	ENSPPYG00000004043	RPUSD4	100	74.005	Pongo_abelii
ENSPEMG00000000278	Rpusd4	79	72.881	ENSPCAG00000000753	RPUSD4	81	72.881	Procavia_capensis
ENSPEMG00000000278	Rpusd4	98	67.116	ENSPCOG00000020694	RPUSD4	100	67.116	Propithecus_coquereli
ENSPEMG00000000278	Rpusd4	97	74.590	ENSPVAG00000000988	RPUSD4	98	74.590	Pteropus_vampyrus
ENSPEMG00000000278	Rpusd4	85	44.377	ENSPNYG00000009652	rpusd4	84	44.377	Pundamilia_nyererei
ENSPEMG00000000278	Rpusd4	90	43.553	ENSPNAG00000012264	rpusd4	91	43.553	Pygocentrus_nattereri
ENSPEMG00000000278	Rpusd4	100	81.698	ENSRNOG00000011567	Rpusd4	100	81.698	Rattus_norvegicus
ENSPEMG00000000278	Rpusd4	100	73.210	ENSRBIG00000034842	RPUSD4	100	73.210	Rhinopithecus_bieti
ENSPEMG00000000278	Rpusd4	100	73.210	ENSRROG00000039753	RPUSD4	100	73.210	Rhinopithecus_roxellana
ENSPEMG00000000278	Rpusd4	99	73.387	ENSSBOG00000030413	RPUSD4	100	73.387	Saimiri_boliviensis_boliviensis
ENSPEMG00000000278	Rpusd4	79	67.442	ENSSHAG00000008304	RPUSD4	99	67.442	Sarcophilus_harrisii
ENSPEMG00000000278	Rpusd4	94	49.036	ENSSFOG00015006203	rpusd4	97	49.457	Scleropages_formosus
ENSPEMG00000000278	Rpusd4	91	44.126	ENSSMAG00000020978	rpusd4	90	44.126	Scophthalmus_maximus
ENSPEMG00000000278	Rpusd4	88	42.522	ENSSDUG00000013399	rpusd4	89	42.522	Seriola_dumerili
ENSPEMG00000000278	Rpusd4	88	42.229	ENSSLDG00000023507	rpusd4	89	42.229	Seriola_lalandi_dorsalis
ENSPEMG00000000278	Rpusd4	88	56.176	ENSSPUG00000001401	RPUSD4	94	56.765	Sphenodon_punctatus
ENSPEMG00000000278	Rpusd4	88	44.706	ENSSPAG00000012163	rpusd4	87	44.706	Stegastes_partitus
ENSPEMG00000000278	Rpusd4	98	71.968	ENSSSCG00000015233	RPUSD4	98	71.968	Sus_scrofa
ENSPEMG00000000278	Rpusd4	78	52.333	ENSTGUG00000000773	RPUSD4	100	52.333	Taeniopygia_guttata
ENSPEMG00000000278	Rpusd4	85	43.333	ENSTRUG00000012283	rpusd4	84	43.333	Takifugu_rubripes
ENSPEMG00000000278	Rpusd4	85	43.030	ENSTNIG00000014676	rpusd4	84	43.030	Tetraodon_nigroviridis
ENSPEMG00000000278	Rpusd4	100	71.353	ENSTTRG00000001555	RPUSD4	100	71.353	Tursiops_truncatus
ENSPEMG00000000278	Rpusd4	52	82.258	ENSUAMG00000005503	-	97	82.258	Ursus_americanus
ENSPEMG00000000278	Rpusd4	100	74.005	ENSUMAG00000002219	RPUSD4	100	74.005	Ursus_maritimus
ENSPEMG00000000278	Rpusd4	75	81.132	ENSVPAG00000001066	RPUSD4	100	81.132	Vicugna_pacos
ENSPEMG00000000278	Rpusd4	100	73.615	ENSVVUG00000020101	RPUSD4	100	73.615	Vulpes_vulpes
ENSPEMG00000000278	Rpusd4	86	44.970	ENSXCOG00000004676	rpusd4	88	44.940	Xiphophorus_couchianus
ENSPEMG00000000278	Rpusd4	86	45.238	ENSXMAG00000023351	rpusd4	85	45.238	Xiphophorus_maculatus