EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000000472 (Gene tree)
Gene ID: 102915833
Gene Symbol: Zfp28
Alias: -
Full Name: ZFP28 zinc finger protein
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 13813 bases
Position: chrKI615993.1:534726-548538
Accession: 102915833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	1	11
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	2	11
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	3	11
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	4	11
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	5	11
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	6	11
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	7	11
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	8	11
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	9	11
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	10	11
ENSPEMP00000000655	zf-C2H2	PF00096.26	3.5e-63	11	11
ENSPEMP00000000655	zf-met	PF12874.7	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000000661	-	2448	XM_006993588	ENSPEMP00000000655	815 (aa)	XP_006993650	-

Gene Model

Click here to download ENSPEMG00000000472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000000472	Zfp28	84	51.837	ENSPEMG00000014415	Zfp1	100	49.186
ENSPEMG00000000472	Zfp28	62	42.857	ENSPEMG00000022706	Sall4	52	42.857
ENSPEMG00000000472	Zfp28	55	40.719	ENSPEMG00000000870	Repin1	84	40.719
ENSPEMG00000000472	Zfp28	84	47.967	ENSPEMG00000020749	-	100	47.619
ENSPEMG00000000472	Zfp28	87	47.033	ENSPEMG00000017339	2610008E11Rik	98	47.033
ENSPEMG00000000472	Zfp28	52	41.549	ENSPEMG00000023302	-	54	41.549
ENSPEMG00000000472	Zfp28	54	41.667	ENSPEMG00000018947	Zfp784	67	41.667
ENSPEMG00000000472	Zfp28	66	49.776	ENSPEMG00000010242	-	78	49.776
ENSPEMG00000000472	Zfp28	62	54.147	ENSPEMG00000018022	-	80	54.147
ENSPEMG00000000472	Zfp28	55	49.573	ENSPEMG00000022216	-	100	49.573
ENSPEMG00000000472	Zfp28	55	40.625	ENSPEMG00000015523	Zfp423	98	33.607
ENSPEMG00000000472	Zfp28	50	33.846	ENSPEMG00000008318	-	92	35.032
ENSPEMG00000000472	Zfp28	85	49.145	ENSPEMG00000023985	Zfp61	99	49.145
ENSPEMG00000000472	Zfp28	69	51.456	ENSPEMG00000000860	Zfp94	98	51.456
ENSPEMG00000000472	Zfp28	85	44.269	ENSPEMG00000016975	Zfp940	99	44.269
ENSPEMG00000000472	Zfp28	66	54.902	ENSPEMG00000000548	-	94	54.902
ENSPEMG00000000472	Zfp28	84	49.889	ENSPEMG00000011776	-	98	60.000
ENSPEMG00000000472	Zfp28	60	33.503	ENSPEMG00000009113	Zfp628	64	43.210
ENSPEMG00000000472	Zfp28	90	50.820	ENSPEMG00000016507	Zfp26	93	50.820
ENSPEMG00000000472	Zfp28	85	50.153	ENSPEMG00000024167	Zfp354a	98	50.000
ENSPEMG00000000472	Zfp28	76	58.140	ENSPEMG00000021937	-	98	58.140
ENSPEMG00000000472	Zfp28	52	42.453	ENSPEMG00000023213	Snai1	51	42.453
ENSPEMG00000000472	Zfp28	71	50.000	ENSPEMG00000021570	Zkscan3	61	50.000
ENSPEMG00000000472	Zfp28	86	47.292	ENSPEMG00000023329	-	98	45.600
ENSPEMG00000000472	Zfp28	55	61.404	ENSPEMG00000014281	-	100	61.404
ENSPEMG00000000472	Zfp28	50	41.935	ENSPEMG00000005321	Patz1	53	32.178
ENSPEMG00000000472	Zfp28	57	40.000	ENSPEMG00000016757	Zfp408	54	40.000
ENSPEMG00000000472	Zfp28	54	46.032	ENSPEMG00000015555	BC025920	99	46.032
ENSPEMG00000000472	Zfp28	59	48.148	ENSPEMG00000007237	Zfp865	78	33.882
ENSPEMG00000000472	Zfp28	57	41.346	ENSPEMG00000020736	Zfp672	91	43.147
ENSPEMG00000000472	Zfp28	56	37.006	ENSPEMG00000016061	Zfp574	75	38.136
ENSPEMG00000000472	Zfp28	64	41.767	ENSPEMG00000021923	Zbtb17	61	41.290
ENSPEMG00000000472	Zfp28	69	49.660	ENSPEMG00000022834	Zfp709	99	49.660
ENSPEMG00000000472	Zfp28	85	39.372	ENSPEMG00000009428	Zfp39	93	39.515
ENSPEMG00000000472	Zfp28	63	53.125	ENSPEMG00000020934	-	99	53.125
ENSPEMG00000000472	Zfp28	65	55.111	ENSPEMG00000021548	Zfp712	99	55.111
ENSPEMG00000000472	Zfp28	56	38.384	ENSPEMG00000014980	Zfp64	75	38.384
ENSPEMG00000000472	Zfp28	55	57.586	ENSPEMG00000007461	-	90	57.586
ENSPEMG00000000472	Zfp28	84	46.313	ENSPEMG00000008817	-	98	46.313
ENSPEMG00000000472	Zfp28	56	46.239	ENSPEMG00000023883	-	86	46.239
ENSPEMG00000000472	Zfp28	67	56.098	ENSPEMG00000008173	-	98	56.098
ENSPEMG00000000472	Zfp28	55	52.000	ENSPEMG00000023566	Zfp768	52	51.408
ENSPEMG00000000472	Zfp28	84	54.717	ENSPEMG00000000403	-	88	54.717
ENSPEMG00000000472	Zfp28	62	52.217	ENSPEMG00000022945	-	82	52.217
ENSPEMG00000000472	Zfp28	57	37.802	ENSPEMG00000016745	Zfp319	92	37.215
ENSPEMG00000000472	Zfp28	84	46.241	ENSPEMG00000007241	-	99	49.330
ENSPEMG00000000472	Zfp28	52	38.571	ENSPEMG00000011739	Snai2	50	39.259
ENSPEMG00000000472	Zfp28	84	53.288	ENSPEMG00000007595	-	99	53.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000472	Zfp28	84	81.856	ENSRNOG00000042777	Zfp28	100	81.856	Rattus_norvegicus