EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000000497 (Gene tree)
Gene ID: 102917858
Gene Symbol: Rpusd1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 4089 bases
Position: chrKI615427.1:483187-487275
Accession: 102917858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000000688	PseudoU_synth_2	PF00849.22	5.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000000694	-	1752	XM_006978808	ENSPEMP00000000688	306 (aa)	XP_006978870	UPI00042A9CC2

Gene Model

Click here to download ENSPEMG00000000497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000497	Rpusd1	100	81.090	ENSG00000007376	RPUSD1	100	86.905	Homo_sapiens
ENSPEMG00000000497	Rpusd1	98	55.960	ENSAPOG00000022221	rpusd1	98	55.960	Acanthochromis_polyacanthus
ENSPEMG00000000497	Rpusd1	100	83.007	ENSAMEG00000007461	RPUSD1	100	83.007	Ailuropoda_melanoleuca
ENSPEMG00000000497	Rpusd1	98	56.863	ENSACIG00000015863	rpusd1	98	57.516	Amphilophus_citrinellus
ENSPEMG00000000497	Rpusd1	98	56.393	ENSAOCG00000021975	rpusd1	95	56.066	Amphiprion_ocellaris
ENSPEMG00000000497	Rpusd1	98	56.066	ENSAPEG00000001316	rpusd1	95	55.738	Amphiprion_percula
ENSPEMG00000000497	Rpusd1	83	63.636	ENSATEG00000002984	rpusd1	98	57.049	Anabas_testudineus
ENSPEMG00000000497	Rpusd1	78	61.134	ENSAPLG00000012316	RPUSD1	99	60.324	Anas_platyrhynchos
ENSPEMG00000000497	Rpusd1	99	68.506	ENSACAG00000008953	RPUSD1	100	68.506	Anolis_carolinensis
ENSPEMG00000000497	Rpusd1	100	82.051	ENSANAG00000024709	RPUSD1	100	83.013	Aotus_nancymaae
ENSPEMG00000000497	Rpusd1	98	58.306	ENSACLG00000013692	rpusd1	98	57.655	Astatotilapia_calliptera
ENSPEMG00000000497	Rpusd1	99	58.416	ENSAMXG00000019802	rpusd1	100	58.416	Astyanax_mexicanus
ENSPEMG00000000497	Rpusd1	100	83.442	ENSBTAG00000000179	RPUSD1	100	84.740	Bos_taurus
ENSPEMG00000000497	Rpusd1	100	82.051	ENSCJAG00000012253	RPUSD1	100	81.731	Callithrix_jacchus
ENSPEMG00000000497	Rpusd1	100	82.353	ENSCAFG00000019614	RPUSD1	100	83.007	Canis_familiaris
ENSPEMG00000000497	Rpusd1	100	82.353	ENSCAFG00020008891	RPUSD1	100	83.007	Canis_lupus_dingo
ENSPEMG00000000497	Rpusd1	100	83.442	ENSCHIG00000012872	RPUSD1	100	84.740	Capra_hircus
ENSPEMG00000000497	Rpusd1	100	83.007	ENSTSYG00000036934	RPUSD1	100	82.680	Carlito_syrichta
ENSPEMG00000000497	Rpusd1	100	87.582	ENSCAPG00000014219	RPUSD1	100	87.582	Cavia_aperea
ENSPEMG00000000497	Rpusd1	100	87.582	ENSCPOG00000034604	RPUSD1	100	87.582	Cavia_porcellus
ENSPEMG00000000497	Rpusd1	100	82.692	ENSCCAG00000034385	RPUSD1	100	83.013	Cebus_capucinus
ENSPEMG00000000497	Rpusd1	100	82.372	ENSCATG00000042983	RPUSD1	100	82.051	Cercocebus_atys
ENSPEMG00000000497	Rpusd1	100	86.928	ENSCLAG00000013966	RPUSD1	100	86.928	Chinchilla_lanigera
ENSPEMG00000000497	Rpusd1	100	82.372	ENSCSAG00000012121	RPUSD1	100	82.051	Chlorocebus_sabaeus
ENSPEMG00000000497	Rpusd1	99	65.909	ENSCPBG00000021101	RPUSD1	99	66.118	Chrysemys_picta_bellii
ENSPEMG00000000497	Rpusd1	92	85.409	ENSCANG00000028576	RPUSD1	98	85.766	Colobus_angolensis_palliatus
ENSPEMG00000000497	Rpusd1	100	93.464	ENSCGRG00001014253	Rpusd1	100	92.810	Cricetulus_griseus_chok1gshd
ENSPEMG00000000497	Rpusd1	100	93.464	ENSCGRG00000017995	Rpusd1	100	92.810	Cricetulus_griseus_crigri
ENSPEMG00000000497	Rpusd1	99	55.556	ENSCSEG00000018512	rpusd1	100	55.556	Cynoglossus_semilaevis
ENSPEMG00000000497	Rpusd1	98	56.536	ENSCVAG00000022746	rpusd1	98	56.536	Cyprinodon_variegatus
ENSPEMG00000000497	Rpusd1	99	63.366	ENSDARG00000060192	rpusd1	100	62.418	Danio_rerio
ENSPEMG00000000497	Rpusd1	100	80.449	ENSDNOG00000003721	RPUSD1	100	80.128	Dasypus_novemcinctus
ENSPEMG00000000497	Rpusd1	100	87.255	ENSDORG00000026656	Rpusd1	100	86.601	Dipodomys_ordii
ENSPEMG00000000497	Rpusd1	99	45.141	ENSEBUG00000008767	rpusd1	94	45.283	Eptatretus_burgeri
ENSPEMG00000000497	Rpusd1	100	81.646	ENSEASG00005018421	RPUSD1	76	81.962	Equus_asinus_asinus
ENSPEMG00000000497	Rpusd1	83	61.024	ENSELUG00000014307	rpusd1	88	53.312	Esox_lucius
ENSPEMG00000000497	Rpusd1	100	81.373	ENSFCAG00000010359	RPUSD1	100	81.373	Felis_catus
ENSPEMG00000000497	Rpusd1	99	67.987	ENSFALG00000003211	RPUSD1	100	67.869	Ficedula_albicollis
ENSPEMG00000000497	Rpusd1	100	87.255	ENSFDAG00000013398	RPUSD1	100	87.255	Fukomys_damarensis
ENSPEMG00000000497	Rpusd1	98	56.436	ENSFHEG00000004736	rpusd1	98	56.436	Fundulus_heteroclitus
ENSPEMG00000000497	Rpusd1	83	62.451	ENSGMOG00000010756	rpusd1	98	55.592	Gadus_morhua
ENSPEMG00000000497	Rpusd1	99	65.815	ENSGALG00000005315	RPUSD1	100	66.885	Gallus_gallus
ENSPEMG00000000497	Rpusd1	98	58.000	ENSGAFG00000009886	rpusd1	98	58.000	Gambusia_affinis
ENSPEMG00000000497	Rpusd1	82	64.143	ENSGACG00000014276	rpusd1	97	57.426	Gasterosteus_aculeatus
ENSPEMG00000000497	Rpusd1	99	65.064	ENSGAGG00000004181	RPUSD1	99	65.789	Gopherus_agassizii
ENSPEMG00000000497	Rpusd1	100	81.410	ENSGGOG00000013997	RPUSD1	100	81.731	Gorilla_gorilla
ENSPEMG00000000497	Rpusd1	98	57.980	ENSHBUG00000023728	rpusd1	98	57.329	Haplochromis_burtoni
ENSPEMG00000000497	Rpusd1	100	86.928	ENSHGLG00000002595	RPUSD1	100	86.928	Heterocephalus_glaber_female
ENSPEMG00000000497	Rpusd1	100	86.928	ENSHGLG00100014303	RPUSD1	100	86.928	Heterocephalus_glaber_male
ENSPEMG00000000497	Rpusd1	98	57.566	ENSHCOG00000002390	rpusd1	99	57.143	Hippocampus_comes
ENSPEMG00000000497	Rpusd1	99	62.171	ENSIPUG00000001570	rpusd1	99	62.171	Ictalurus_punctatus
ENSPEMG00000000497	Rpusd1	100	88.235	ENSSTOG00000004276	RPUSD1	100	88.235	Ictidomys_tridecemlineatus
ENSPEMG00000000497	Rpusd1	100	91.176	ENSJJAG00000015696	Rpusd1	100	91.176	Jaculus_jaculus
ENSPEMG00000000497	Rpusd1	98	56.106	ENSKMAG00000017287	rpusd1	98	56.766	Kryptolebias_marmoratus
ENSPEMG00000000497	Rpusd1	98	56.721	ENSLBEG00000013354	RPUSD1	98	57.049	Labrus_bergylta
ENSPEMG00000000497	Rpusd1	98	56.721	ENSLBEG00000022502	rpusd1	98	57.049	Labrus_bergylta
ENSPEMG00000000497	Rpusd1	99	63.245	ENSLACG00000008869	RPUSD1	99	63.245	Latimeria_chalumnae
ENSPEMG00000000497	Rpusd1	71	73.611	ENSLOCG00000005682	rpusd1	99	73.611	Lepisosteus_oculatus
ENSPEMG00000000497	Rpusd1	100	80.719	ENSLAFG00000002115	RPUSD1	100	80.719	Loxodonta_africana
ENSPEMG00000000497	Rpusd1	100	82.692	ENSMFAG00000003961	RPUSD1	100	82.372	Macaca_fascicularis
ENSPEMG00000000497	Rpusd1	100	82.692	ENSMMUG00000000842	RPUSD1	100	82.372	Macaca_mulatta
ENSPEMG00000000497	Rpusd1	100	82.692	ENSMNEG00000042712	RPUSD1	100	82.372	Macaca_nemestrina
ENSPEMG00000000497	Rpusd1	100	82.692	ENSMLEG00000030591	RPUSD1	100	82.372	Mandrillus_leucophaeus
ENSPEMG00000000497	Rpusd1	83	63.636	ENSMAMG00000004735	rpusd1	98	57.190	Mastacembelus_armatus
ENSPEMG00000000497	Rpusd1	98	58.306	ENSMZEG00005003214	rpusd1	98	57.655	Maylandia_zebra
ENSPEMG00000000497	Rpusd1	97	66.777	ENSMGAG00000005447	RPUSD1	99	66.777	Meleagris_gallopavo
ENSPEMG00000000497	Rpusd1	86	86.842	ENSMAUG00000019998	Rpusd1	100	86.842	Mesocricetus_auratus
ENSPEMG00000000497	Rpusd1	100	83.974	ENSMICG00000017561	RPUSD1	100	84.039	Microcebus_murinus
ENSPEMG00000000497	Rpusd1	100	96.078	ENSMOCG00000014082	Rpusd1	100	96.078	Microtus_ochrogaster
ENSPEMG00000000497	Rpusd1	79	65.975	ENSMMOG00000012569	rpusd1	99	57.333	Mola_mola
ENSPEMG00000000497	Rpusd1	100	71.613	ENSMODG00000016882	RPUSD1	100	70.968	Monodelphis_domestica
ENSPEMG00000000497	Rpusd1	98	56.863	ENSMALG00000017818	rpusd1	98	57.190	Monopterus_albus
ENSPEMG00000000497	Rpusd1	100	95.098	MGP_CAROLIEiJ_G0021244	Rpusd1	100	95.098	Mus_caroli
ENSPEMG00000000497	Rpusd1	100	96.078	ENSMUSG00000041199	Rpusd1	100	96.078	Mus_musculus
ENSPEMG00000000497	Rpusd1	100	93.506	MGP_PahariEiJ_G0023562	Rpusd1	100	93.506	Mus_pahari
ENSPEMG00000000497	Rpusd1	100	96.078	MGP_SPRETEiJ_G0022155	Rpusd1	100	96.078	Mus_spretus
ENSPEMG00000000497	Rpusd1	100	82.353	ENSMPUG00000015897	RPUSD1	100	82.680	Mustela_putorius_furo
ENSPEMG00000000497	Rpusd1	100	83.654	ENSMLUG00000001089	RPUSD1	100	84.295	Myotis_lucifugus
ENSPEMG00000000497	Rpusd1	100	92.484	ENSNGAG00000003595	Rpusd1	100	92.484	Nannospalax_galili
ENSPEMG00000000497	Rpusd1	98	58.667	ENSNBRG00000006457	rpusd1	98	58.667	Neolamprologus_brichardi
ENSPEMG00000000497	Rpusd1	55	77.714	ENSNLEG00000008424	-	100	77.143	Nomascus_leucogenys
ENSPEMG00000000497	Rpusd1	100	70.740	ENSMEUG00000016049	RPUSD1	100	70.915	Notamacropus_eugenii
ENSPEMG00000000497	Rpusd1	99	77.961	ENSOPRG00000008340	RPUSD1	99	77.303	Ochotona_princeps
ENSPEMG00000000497	Rpusd1	100	84.967	ENSODEG00000016945	RPUSD1	100	84.967	Octodon_degus
ENSPEMG00000000497	Rpusd1	98	57.655	ENSONIG00000015672	rpusd1	99	57.003	Oreochromis_niloticus
ENSPEMG00000000497	Rpusd1	99	57.947	ENSORLG00000013009	rpusd1	99	57.947	Oryzias_latipes
ENSPEMG00000000497	Rpusd1	99	57.616	ENSORLG00020010382	rpusd1	99	57.616	Oryzias_latipes_hni
ENSPEMG00000000497	Rpusd1	99	56.954	ENSORLG00015021354	rpusd1	99	56.954	Oryzias_latipes_hsok
ENSPEMG00000000497	Rpusd1	98	57.525	ENSOMEG00000021426	rpusd1	98	57.525	Oryzias_melastigma
ENSPEMG00000000497	Rpusd1	100	86.859	ENSOGAG00000003795	RPUSD1	100	86.218	Otolemur_garnettii
ENSPEMG00000000497	Rpusd1	100	83.442	ENSOARG00000014254	RPUSD1	100	84.740	Ovis_aries
ENSPEMG00000000497	Rpusd1	100	81.410	ENSPPAG00000034797	RPUSD1	100	81.731	Pan_paniscus
ENSPEMG00000000497	Rpusd1	100	81.046	ENSPPRG00000012389	RPUSD1	100	80.259	Panthera_pardus
ENSPEMG00000000497	Rpusd1	100	81.373	ENSPTIG00000008545	RPUSD1	92	80.583	Panthera_tigris_altaica
ENSPEMG00000000497	Rpusd1	100	81.410	ENSPTRG00000007565	RPUSD1	100	81.731	Pan_troglodytes
ENSPEMG00000000497	Rpusd1	100	82.051	ENSPANG00000024401	RPUSD1	100	81.731	Papio_anubis
ENSPEMG00000000497	Rpusd1	99	59.936	ENSPKIG00000018890	rpusd1	91	60.518	Paramormyrops_kingsleyae
ENSPEMG00000000497	Rpusd1	99	67.647	ENSPSIG00000013945	RPUSD1	100	67.541	Pelodiscus_sinensis
ENSPEMG00000000497	Rpusd1	98	57.525	ENSPMGG00000014950	rpusd1	98	57.525	Periophthalmus_magnuspinnatus
ENSPEMG00000000497	Rpusd1	82	57.143	ENSPMAG00000001563	rpusd1	82	57.143	Petromyzon_marinus
ENSPEMG00000000497	Rpusd1	100	71.246	ENSPCIG00000021216	-	94	71.895	Phascolarctos_cinereus
ENSPEMG00000000497	Rpusd1	98	57.756	ENSPFOG00000007946	rpusd1	98	57.525	Poecilia_formosa
ENSPEMG00000000497	Rpusd1	98	57.756	ENSPLAG00000011925	rpusd1	98	57.525	Poecilia_latipinna
ENSPEMG00000000497	Rpusd1	98	57.426	ENSPMEG00000002910	rpusd1	98	57.191	Poecilia_mexicana
ENSPEMG00000000497	Rpusd1	98	58.667	ENSPREG00000019851	rpusd1	98	58.667	Poecilia_reticulata
ENSPEMG00000000497	Rpusd1	100	66.993	ENSPCAG00000002258	RPUSD1	100	66.993	Procavia_capensis
ENSPEMG00000000497	Rpusd1	100	85.577	ENSPCOG00000022582	RPUSD1	100	85.577	Propithecus_coquereli
ENSPEMG00000000497	Rpusd1	100	82.051	ENSPVAG00000013104	RPUSD1	100	81.731	Pteropus_vampyrus
ENSPEMG00000000497	Rpusd1	98	57.980	ENSPNYG00000024076	rpusd1	98	57.525	Pundamilia_nyererei
ENSPEMG00000000497	Rpusd1	99	57.756	ENSPNAG00000013806	rpusd1	100	57.756	Pygocentrus_nattereri
ENSPEMG00000000497	Rpusd1	100	93.791	ENSRNOG00000023639	Rpusd1	100	93.791	Rattus_norvegicus
ENSPEMG00000000497	Rpusd1	100	83.013	ENSRBIG00000030238	RPUSD1	100	83.333	Rhinopithecus_bieti
ENSPEMG00000000497	Rpusd1	100	83.013	ENSRROG00000036663	RPUSD1	100	83.333	Rhinopithecus_roxellana
ENSPEMG00000000497	Rpusd1	100	82.353	ENSSBOG00000033063	RPUSD1	100	82.680	Saimiri_boliviensis_boliviensis
ENSPEMG00000000497	Rpusd1	100	70.607	ENSSHAG00000013500	RPUSD1	100	71.242	Sarcophilus_harrisii
ENSPEMG00000000497	Rpusd1	99	62.252	ENSSFOG00015014394	rpusd1	99	62.252	Scleropages_formosus
ENSPEMG00000000497	Rpusd1	98	57.705	ENSSMAG00000008045	rpusd1	91	57.705	Scophthalmus_maximus
ENSPEMG00000000497	Rpusd1	83	66.008	ENSSDUG00000001829	rpusd1	95	59.016	Seriola_dumerili
ENSPEMG00000000497	Rpusd1	83	66.008	ENSSLDG00000020853	rpusd1	95	59.016	Seriola_lalandi_dorsalis
ENSPEMG00000000497	Rpusd1	55	87.425	ENSSARG00000011187	-	100	87.425	Sorex_araneus
ENSPEMG00000000497	Rpusd1	63	54.922	ENSSPUG00000005119	-	100	55.208	Sphenodon_punctatus
ENSPEMG00000000497	Rpusd1	98	57.705	ENSSPAG00000012708	rpusd1	98	57.705	Stegastes_partitus
ENSPEMG00000000497	Rpusd1	100	84.295	ENSSSCG00000008000	RPUSD1	98	88.189	Sus_scrofa
ENSPEMG00000000497	Rpusd1	83	75.686	ENSTGUG00000015375	RPUSD1	100	75.686	Taeniopygia_guttata
ENSPEMG00000000497	Rpusd1	98	56.536	ENSTRUG00000003041	rpusd1	98	56.863	Takifugu_rubripes
ENSPEMG00000000497	Rpusd1	98	54.333	ENSTNIG00000002660	rpusd1	99	54.333	Tetraodon_nigroviridis
ENSPEMG00000000497	Rpusd1	100	83.974	ENSTTRG00000010167	RPUSD1	100	82.051	Tursiops_truncatus
ENSPEMG00000000497	Rpusd1	100	82.680	ENSUAMG00000012736	RPUSD1	100	83.333	Ursus_americanus
ENSPEMG00000000497	Rpusd1	100	82.680	ENSUMAG00000021174	RPUSD1	100	83.333	Ursus_maritimus
ENSPEMG00000000497	Rpusd1	100	81.699	ENSVVUG00000012357	RPUSD1	100	81.699	Vulpes_vulpes
ENSPEMG00000000497	Rpusd1	100	61.765	ENSXETG00000007184	rpusd1	100	61.765	Xenopus_tropicalis
ENSPEMG00000000497	Rpusd1	98	57.667	ENSXCOG00000017930	rpusd1	98	57.667	Xiphophorus_couchianus
ENSPEMG00000000497	Rpusd1	98	58.000	ENSXMAG00000024084	rpusd1	98	58.000	Xiphophorus_maculatus