EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000000514 (Gene tree)
Gene ID: 102903103
Gene Symbol: Zc3hc1
Alias: -
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 33541 bases
Position: chrKI615435.1:2653308-2686848
Accession: 102903103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000000745	zf-C3HC	PF07967.13	7.2e-37	1	1
ENSPEMP00000000747	zf-C3HC	PF07967.13	2.7e-36	1	1
ENSPEMP00000000741	zf-C3HC	PF07967.13	2.9e-36	1	1
ENSPEMP00000000747	Rsm1	PF08600.10	8.1e-18	1	2
ENSPEMP00000000747	Rsm1	PF08600.10	8.1e-18	2	2
ENSPEMP00000000741	Rsm1	PF08600.10	9.2e-18	1	2
ENSPEMP00000000741	Rsm1	PF08600.10	9.2e-18	2	2
ENSPEMP00000000745	Rsm1	PF08600.10	1.7e-17	1	2
ENSPEMP00000000745	Rsm1	PF08600.10	1.7e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000000747	-	1875	XM_006979407	ENSPEMP00000000741	501 (aa)	XP_006979469	UPI00042AB27B
ENSPEMT00000000751	-	1293	-	ENSPEMP00000000745	430 (aa)	-	-
ENSPEMT00000000753	-	1446	-	ENSPEMP00000000747	481 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000000514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000514	Zc3hc1	99	86.627	ENSG00000091732	ZC3HC1	99	86.627	Homo_sapiens
ENSPEMG00000000514	Zc3hc1	94	45.672	ENSAPOG00000009078	zc3hc1	95	41.955	Acanthochromis_polyacanthus
ENSPEMG00000000514	Zc3hc1	100	85.516	ENSAMEG00000005425	ZC3HC1	100	85.516	Ailuropoda_melanoleuca
ENSPEMG00000000514	Zc3hc1	94	44.512	ENSACIG00000019513	zc3hc1	95	40.568	Amphilophus_citrinellus
ENSPEMG00000000514	Zc3hc1	95	44.016	ENSAOCG00000024310	zc3hc1	95	42.566	Amphiprion_ocellaris
ENSPEMG00000000514	Zc3hc1	95	44.016	ENSAPEG00000004907	zc3hc1	95	42.566	Amphiprion_percula
ENSPEMG00000000514	Zc3hc1	84	46.336	ENSATEG00000016898	zc3hc1	85	45.735	Anabas_testudineus
ENSPEMG00000000514	Zc3hc1	88	60.449	ENSAPLG00000003832	ZC3HC1	99	60.449	Anas_platyrhynchos
ENSPEMG00000000514	Zc3hc1	95	62.680	ENSACAG00000001638	ZC3HC1	95	62.680	Anolis_carolinensis
ENSPEMG00000000514	Zc3hc1	100	85.383	ENSANAG00000022213	ZC3HC1	100	85.383	Aotus_nancymaae
ENSPEMG00000000514	Zc3hc1	86	45.928	ENSACLG00000025033	zc3hc1	98	42.117	Astatotilapia_calliptera
ENSPEMG00000000514	Zc3hc1	95	43.534	ENSAMXG00000036792	zc3hc1	97	42.620	Astyanax_mexicanus
ENSPEMG00000000514	Zc3hc1	100	85.458	ENSBTAG00000011247	ZC3HC1	100	85.458	Bos_taurus
ENSPEMG00000000514	Zc3hc1	100	85.259	ENSCJAG00000010536	ZC3HC1	100	85.259	Callithrix_jacchus
ENSPEMG00000000514	Zc3hc1	100	88.048	ENSCAFG00000028735	-	100	88.048	Canis_familiaris
ENSPEMG00000000514	Zc3hc1	100	88.446	ENSCAFG00000031850	-	100	88.446	Canis_familiaris
ENSPEMG00000000514	Zc3hc1	100	88.048	ENSCAFG00000029401	-	99	88.048	Canis_familiaris
ENSPEMG00000000514	Zc3hc1	100	87.525	ENSCAFG00000001499	-	99	87.525	Canis_familiaris
ENSPEMG00000000514	Zc3hc1	100	86.508	ENSCAFG00020023333	-	100	86.508	Canis_lupus_dingo
ENSPEMG00000000514	Zc3hc1	100	88.247	ENSCAFG00020006829	-	100	88.247	Canis_lupus_dingo
ENSPEMG00000000514	Zc3hc1	100	79.482	ENSCHIG00000014103	ZC3HC1	100	79.482	Capra_hircus
ENSPEMG00000000514	Zc3hc1	100	83.665	ENSTSYG00000002843	ZC3HC1	100	83.665	Carlito_syrichta
ENSPEMG00000000514	Zc3hc1	90	60.907	ENSCAPG00000016300	ZC3HC1	100	61.269	Cavia_aperea
ENSPEMG00000000514	Zc3hc1	100	81.474	ENSCPOG00000014034	ZC3HC1	100	83.235	Cavia_porcellus
ENSPEMG00000000514	Zc3hc1	100	68.127	ENSCCAG00000020384	ZC3HC1	99	84.956	Cebus_capucinus
ENSPEMG00000000514	Zc3hc1	100	86.653	ENSCATG00000023130	ZC3HC1	100	86.653	Cercocebus_atys
ENSPEMG00000000514	Zc3hc1	100	60.479	ENSCLAG00000008260	ZC3HC1	100	59.562	Chinchilla_lanigera
ENSPEMG00000000514	Zc3hc1	73	85.519	ENSCSAG00000009881	ZC3HC1	97	85.519	Chlorocebus_sabaeus
ENSPEMG00000000514	Zc3hc1	90	85.588	ENSCHOG00000011846	ZC3HC1	99	85.588	Choloepus_hoffmanni
ENSPEMG00000000514	Zc3hc1	96	67.284	ENSCPBG00000017519	ZC3HC1	100	66.071	Chrysemys_picta_bellii
ENSPEMG00000000514	Zc3hc1	100	86.454	ENSCANG00000029091	ZC3HC1	100	86.454	Colobus_angolensis_palliatus
ENSPEMG00000000514	Zc3hc1	100	93.413	ENSCGRG00001018805	Zc3hc1	100	93.413	Cricetulus_griseus_chok1gshd
ENSPEMG00000000514	Zc3hc1	100	92.216	ENSCGRG00000017114	Zc3hc1	100	92.216	Cricetulus_griseus_crigri
ENSPEMG00000000514	Zc3hc1	96	42.800	ENSCSEG00000009284	zc3hc1	94	41.767	Cynoglossus_semilaevis
ENSPEMG00000000514	Zc3hc1	93	45.732	ENSCVAG00000011566	zc3hc1	94	41.942	Cyprinodon_variegatus
ENSPEMG00000000514	Zc3hc1	95	47.059	ENSDARG00000062651	zc3hc1	95	45.935	Danio_rerio
ENSPEMG00000000514	Zc3hc1	100	85.060	ENSDNOG00000045016	ZC3HC1	100	85.060	Dasypus_novemcinctus
ENSPEMG00000000514	Zc3hc1	100	76.295	ENSDORG00000008697	Zc3hc1	100	76.295	Dipodomys_ordii
ENSPEMG00000000514	Zc3hc1	90	87.832	ENSEASG00005008789	ZC3HC1	97	87.832	Equus_asinus_asinus
ENSPEMG00000000514	Zc3hc1	100	85.885	ENSECAG00000017886	ZC3HC1	100	85.885	Equus_caballus
ENSPEMG00000000514	Zc3hc1	84	78.395	ENSEEUG00000003123	ZC3HC1	84	78.395	Erinaceus_europaeus
ENSPEMG00000000514	Zc3hc1	96	43.137	ENSELUG00000023168	zc3hc1	97	43.418	Esox_lucius
ENSPEMG00000000514	Zc3hc1	100	86.311	ENSFCAG00000010429	ZC3HC1	100	86.311	Felis_catus
ENSPEMG00000000514	Zc3hc1	90	57.692	ENSFALG00000005006	ZC3HC1	100	56.624	Ficedula_albicollis
ENSPEMG00000000514	Zc3hc1	100	83.068	ENSFDAG00000019897	ZC3HC1	100	83.068	Fukomys_damarensis
ENSPEMG00000000514	Zc3hc1	95	45.181	ENSFHEG00000020149	zc3hc1	99	40.467	Fundulus_heteroclitus
ENSPEMG00000000514	Zc3hc1	94	41.667	ENSGMOG00000002914	zc3hc1	95	40.787	Gadus_morhua
ENSPEMG00000000514	Zc3hc1	98	60.243	ENSGALG00000008003	ZC3HC1	99	60.041	Gallus_gallus
ENSPEMG00000000514	Zc3hc1	95	45.345	ENSGAFG00000016095	zc3hc1	96	42.105	Gambusia_affinis
ENSPEMG00000000514	Zc3hc1	93	45.921	ENSGACG00000019706	zc3hc1	94	42.562	Gasterosteus_aculeatus
ENSPEMG00000000514	Zc3hc1	77	67.519	ENSGAGG00000016106	ZC3HC1	100	67.519	Gopherus_agassizii
ENSPEMG00000000514	Zc3hc1	99	86.427	ENSGGOG00000015504	ZC3HC1	99	86.427	Gorilla_gorilla
ENSPEMG00000000514	Zc3hc1	94	42.505	ENSHBUG00000008347	zc3hc1	94	41.443	Haplochromis_burtoni
ENSPEMG00000000514	Zc3hc1	100	84.263	ENSHGLG00000005085	ZC3HC1	100	84.263	Heterocephalus_glaber_female
ENSPEMG00000000514	Zc3hc1	100	84.064	ENSHGLG00100011395	ZC3HC1	100	84.064	Heterocephalus_glaber_male
ENSPEMG00000000514	Zc3hc1	95	43.595	ENSHCOG00000014309	zc3hc1	95	42.268	Hippocampus_comes
ENSPEMG00000000514	Zc3hc1	100	85.458	ENSSTOG00000023599	-	100	85.458	Ictidomys_tridecemlineatus
ENSPEMG00000000514	Zc3hc1	99	45.480	ENSKMAG00000015315	zc3hc1	92	41.961	Kryptolebias_marmoratus
ENSPEMG00000000514	Zc3hc1	94	43.658	ENSLBEG00000017325	zc3hc1	95	40.927	Labrus_bergylta
ENSPEMG00000000514	Zc3hc1	82	54.390	ENSLACG00000013032	ZC3HC1	98	54.699	Latimeria_chalumnae
ENSPEMG00000000514	Zc3hc1	96	53.593	ENSLOCG00000015963	zc3hc1	97	50.701	Lepisosteus_oculatus
ENSPEMG00000000514	Zc3hc1	100	83.794	ENSLAFG00000001292	ZC3HC1	100	83.202	Loxodonta_africana
ENSPEMG00000000514	Zc3hc1	100	86.853	ENSMFAG00000030176	ZC3HC1	100	86.853	Macaca_fascicularis
ENSPEMG00000000514	Zc3hc1	100	86.311	ENSMMUG00000006155	ZC3HC1	100	86.311	Macaca_mulatta
ENSPEMG00000000514	Zc3hc1	100	87.052	ENSMNEG00000011833	ZC3HC1	100	87.052	Macaca_nemestrina
ENSPEMG00000000514	Zc3hc1	100	86.853	ENSMLEG00000027328	ZC3HC1	100	86.853	Mandrillus_leucophaeus
ENSPEMG00000000514	Zc3hc1	94	45.994	ENSMAMG00000010691	zc3hc1	95	42.394	Mastacembelus_armatus
ENSPEMG00000000514	Zc3hc1	93	44.377	ENSMZEG00005007142	zc3hc1	94	41.237	Maylandia_zebra
ENSPEMG00000000514	Zc3hc1	98	59.920	ENSMGAG00000002977	ZC3HC1	99	60.321	Meleagris_gallopavo
ENSPEMG00000000514	Zc3hc1	82	85.990	ENSMAUG00000017032	Zc3hc1	92	85.990	Mesocricetus_auratus
ENSPEMG00000000514	Zc3hc1	100	85.060	ENSMICG00000009167	ZC3HC1	100	85.060	Microcebus_murinus
ENSPEMG00000000514	Zc3hc1	100	91.816	ENSMOCG00000015239	Zc3hc1	100	91.816	Microtus_ochrogaster
ENSPEMG00000000514	Zc3hc1	85	41.834	ENSMMOG00000002204	zc3hc1	98	40.553	Mola_mola
ENSPEMG00000000514	Zc3hc1	100	61.923	ENSMODG00000014630	ZC3HC1	100	61.923	Monodelphis_domestica
ENSPEMG00000000514	Zc3hc1	93	45.115	ENSMALG00000014447	zc3hc1	95	41.449	Monopterus_albus
ENSPEMG00000000514	Zc3hc1	100	88.623	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	90.265	Mus_caroli
ENSPEMG00000000514	Zc3hc1	100	88.837	ENSMUSG00000039130	Zc3hc1	100	88.837	Mus_musculus
ENSPEMG00000000514	Zc3hc1	100	82.435	MGP_PahariEiJ_G0021941	Zc3hc1	100	82.435	Mus_pahari
ENSPEMG00000000514	Zc3hc1	100	89.070	MGP_SPRETEiJ_G0029183	Zc3hc1	100	89.070	Mus_spretus
ENSPEMG00000000514	Zc3hc1	100	85.685	ENSMPUG00000005297	ZC3HC1	95	86.221	Mustela_putorius_furo
ENSPEMG00000000514	Zc3hc1	66	79.624	ENSMLUG00000029228	-	99	76.676	Myotis_lucifugus
ENSPEMG00000000514	Zc3hc1	100	84.158	ENSMLUG00000000063	-	100	84.158	Myotis_lucifugus
ENSPEMG00000000514	Zc3hc1	100	86.853	ENSNGAG00000019014	Zc3hc1	100	86.853	Nannospalax_galili
ENSPEMG00000000514	Zc3hc1	93	44.681	ENSNBRG00000004577	zc3hc1	94	41.322	Neolamprologus_brichardi
ENSPEMG00000000514	Zc3hc1	99	85.429	ENSNLEG00000012698	ZC3HC1	99	85.429	Nomascus_leucogenys
ENSPEMG00000000514	Zc3hc1	98	76.220	ENSMEUG00000011023	ZC3HC1	98	76.065	Notamacropus_eugenii
ENSPEMG00000000514	Zc3hc1	76	79.457	ENSOPRG00000007867	-	68	79.457	Ochotona_princeps
ENSPEMG00000000514	Zc3hc1	100	81.076	ENSODEG00000014604	ZC3HC1	100	81.076	Octodon_degus
ENSPEMG00000000514	Zc3hc1	94	42.710	ENSONIG00000011644	zc3hc1	94	41.649	Oreochromis_niloticus
ENSPEMG00000000514	Zc3hc1	90	67.026	ENSOANG00000011460	ZC3HC1	100	67.026	Ornithorhynchus_anatinus
ENSPEMG00000000514	Zc3hc1	100	81.980	ENSOCUG00000017137	ZC3HC1	100	81.188	Oryctolagus_cuniculus
ENSPEMG00000000514	Zc3hc1	94	46.828	ENSORLG00000014409	zc3hc1	94	42.094	Oryzias_latipes
ENSPEMG00000000514	Zc3hc1	94	46.526	ENSORLG00020015874	zc3hc1	94	41.889	Oryzias_latipes_hni
ENSPEMG00000000514	Zc3hc1	91	47.188	ENSORLG00015014641	zc3hc1	94	41.684	Oryzias_latipes_hsok
ENSPEMG00000000514	Zc3hc1	95	43.424	ENSOMEG00000000215	zc3hc1	95	41.988	Oryzias_melastigma
ENSPEMG00000000514	Zc3hc1	95	43.424	ENSOMEG00000020604	zc3hc1	95	42.562	Oryzias_melastigma
ENSPEMG00000000514	Zc3hc1	100	78.884	ENSOGAG00000026193	ZC3HC1	100	78.884	Otolemur_garnettii
ENSPEMG00000000514	Zc3hc1	100	86.139	ENSOARG00000004907	ZC3HC1	99	86.139	Ovis_aries
ENSPEMG00000000514	Zc3hc1	99	86.627	ENSPPAG00000043172	ZC3HC1	99	86.627	Pan_paniscus
ENSPEMG00000000514	Zc3hc1	100	85.615	ENSPPRG00000001004	ZC3HC1	100	85.615	Panthera_pardus
ENSPEMG00000000514	Zc3hc1	100	86.079	ENSPTIG00000007823	ZC3HC1	100	86.079	Panthera_tigris_altaica
ENSPEMG00000000514	Zc3hc1	99	86.228	ENSPTRG00000019685	ZC3HC1	99	86.228	Pan_troglodytes
ENSPEMG00000000514	Zc3hc1	100	86.311	ENSPANG00000014229	ZC3HC1	100	86.311	Papio_anubis
ENSPEMG00000000514	Zc3hc1	94	51.258	ENSPKIG00000007172	zc3hc1	95	48.025	Paramormyrops_kingsleyae
ENSPEMG00000000514	Zc3hc1	92	65.772	ENSPSIG00000016646	ZC3HC1	100	59.339	Pelodiscus_sinensis
ENSPEMG00000000514	Zc3hc1	94	41.247	ENSPMGG00000003548	zc3hc1	94	40.865	Periophthalmus_magnuspinnatus
ENSPEMG00000000514	Zc3hc1	99	72.655	ENSPCIG00000020619	ZC3HC1	100	75.321	Phascolarctos_cinereus
ENSPEMG00000000514	Zc3hc1	95	45.238	ENSPFOG00000003466	zc3hc1	96	42.254	Poecilia_formosa
ENSPEMG00000000514	Zc3hc1	95	45.045	ENSPLAG00000022211	zc3hc1	96	42.105	Poecilia_latipinna
ENSPEMG00000000514	Zc3hc1	95	45.345	ENSPMEG00000001458	zc3hc1	96	42.308	Poecilia_mexicana
ENSPEMG00000000514	Zc3hc1	95	45.345	ENSPREG00000004004	zc3hc1	96	42.105	Poecilia_reticulata
ENSPEMG00000000514	Zc3hc1	99	78.529	ENSPPYG00000017998	ZC3HC1	99	78.529	Pongo_abelii
ENSPEMG00000000514	Zc3hc1	92	81.304	ENSPCAG00000001182	ZC3HC1	100	80.652	Procavia_capensis
ENSPEMG00000000514	Zc3hc1	100	85.857	ENSPCOG00000017354	ZC3HC1	100	85.857	Propithecus_coquereli
ENSPEMG00000000514	Zc3hc1	100	80.080	ENSPVAG00000003195	ZC3HC1	100	79.482	Pteropus_vampyrus
ENSPEMG00000000514	Zc3hc1	93	44.377	ENSPNYG00000020692	zc3hc1	94	41.237	Pundamilia_nyererei
ENSPEMG00000000514	Zc3hc1	93	44.934	ENSPNAG00000020746	zc3hc1	95	43.368	Pygocentrus_nattereri
ENSPEMG00000000514	Zc3hc1	100	89.841	ENSRNOG00000010154	Zc3hc1	100	89.841	Rattus_norvegicus
ENSPEMG00000000514	Zc3hc1	90	86.976	ENSRBIG00000029409	ZC3HC1	100	86.976	Rhinopithecus_bieti
ENSPEMG00000000514	Zc3hc1	100	86.454	ENSRROG00000041831	ZC3HC1	100	86.454	Rhinopithecus_roxellana
ENSPEMG00000000514	Zc3hc1	100	68.526	ENSSBOG00000032787	ZC3HC1	96	86.000	Saimiri_boliviensis_boliviensis
ENSPEMG00000000514	Zc3hc1	92	75.699	ENSSHAG00000002529	ZC3HC1	100	75.699	Sarcophilus_harrisii
ENSPEMG00000000514	Zc3hc1	95	49.076	ENSSFOG00015003667	zc3hc1	91	48.148	Scleropages_formosus
ENSPEMG00000000514	Zc3hc1	95	42.626	ENSSMAG00000000647	zc3hc1	86	41.988	Scophthalmus_maximus
ENSPEMG00000000514	Zc3hc1	94	46.547	ENSSDUG00000004241	zc3hc1	93	42.740	Seriola_dumerili
ENSPEMG00000000514	Zc3hc1	94	46.246	ENSSLDG00000025056	zc3hc1	93	42.740	Seriola_lalandi_dorsalis
ENSPEMG00000000514	Zc3hc1	99	75.848	ENSSARG00000012013	ZC3HC1	99	75.848	Sorex_araneus
ENSPEMG00000000514	Zc3hc1	90	57.859	ENSSPUG00000000778	ZC3HC1	86	57.604	Sphenodon_punctatus
ENSPEMG00000000514	Zc3hc1	94	45.672	ENSSPAG00000020041	zc3hc1	95	42.363	Stegastes_partitus
ENSPEMG00000000514	Zc3hc1	100	86.471	ENSSSCG00000016565	ZC3HC1	100	85.259	Sus_scrofa
ENSPEMG00000000514	Zc3hc1	95	42.418	ENSTRUG00000020077	zc3hc1	95	41.152	Takifugu_rubripes
ENSPEMG00000000514	Zc3hc1	93	45.988	ENSTNIG00000007585	zc3hc1	99	40.664	Tetraodon_nigroviridis
ENSPEMG00000000514	Zc3hc1	99	74.850	ENSTBEG00000005216	ZC3HC1	99	74.850	Tupaia_belangeri
ENSPEMG00000000514	Zc3hc1	95	85.849	ENSTTRG00000008458	ZC3HC1	100	85.208	Tursiops_truncatus
ENSPEMG00000000514	Zc3hc1	100	86.255	ENSUAMG00000020249	ZC3HC1	100	86.255	Ursus_americanus
ENSPEMG00000000514	Zc3hc1	100	85.857	ENSUMAG00000009268	ZC3HC1	100	85.857	Ursus_maritimus
ENSPEMG00000000514	Zc3hc1	90	87.755	ENSVPAG00000010846	ZC3HC1	76	89.362	Vicugna_pacos
ENSPEMG00000000514	Zc3hc1	100	86.722	ENSVVUG00000012386	ZC3HC1	100	86.722	Vulpes_vulpes
ENSPEMG00000000514	Zc3hc1	95	51.392	ENSXETG00000033900	zc3hc1	96	51.392	Xenopus_tropicalis
ENSPEMG00000000514	Zc3hc1	96	42.222	ENSXCOG00000013570	zc3hc1	97	42.386	Xiphophorus_couchianus
ENSPEMG00000000514	Zc3hc1	88	44.444	ENSXMAG00000010979	zc3hc1	95	43.326	Xiphophorus_maculatus