EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000000870 (Gene tree)
Gene ID: 102914708
Gene Symbol: Repin1
Alias: -
Full Name: replication initiator 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 5195 bases
Position: chrKI616217.1:751501-756695
Accession: 102914708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000001197	zf-C2H2	PF00096.26	4.3e-66	1	10
ENSPEMP00000001197	zf-C2H2	PF00096.26	4.3e-66	2	10
ENSPEMP00000001197	zf-C2H2	PF00096.26	4.3e-66	3	10
ENSPEMP00000001197	zf-C2H2	PF00096.26	4.3e-66	4	10
ENSPEMP00000001197	zf-C2H2	PF00096.26	4.3e-66	5	10
ENSPEMP00000001197	zf-C2H2	PF00096.26	4.3e-66	6	10
ENSPEMP00000001197	zf-C2H2	PF00096.26	4.3e-66	7	10
ENSPEMP00000001197	zf-C2H2	PF00096.26	4.3e-66	8	10
ENSPEMP00000001197	zf-C2H2	PF00096.26	4.3e-66	9	10
ENSPEMP00000001197	zf-C2H2	PF00096.26	4.3e-66	10	10
ENSPEMP00000001197	zf-met	PF12874.7	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000001225	-	3250	XM_006995435	ENSPEMP00000001197	604 (aa)	XP_006995497	UPI00042AC520

Gene Model

Click here to download ENSPEMG00000000870's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000870's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000000870	Repin1	71	41.772	ENSPEMG00000012225	Snai3	71	41.772
ENSPEMG00000000870	Repin1	58	58.537	ENSPEMG00000004029	Zeb2	55	31.387
ENSPEMG00000000870	Repin1	91	36.893	ENSPEMG00000009428	Zfp39	67	34.615
ENSPEMG00000000870	Repin1	72	35.238	ENSPEMG00000008318	-	92	35.238
ENSPEMG00000000870	Repin1	84	33.533	ENSPEMG00000021937	-	84	38.125
ENSPEMG00000000870	Repin1	83	37.500	ENSPEMG00000021548	Zfp712	88	37.838
ENSPEMG00000000870	Repin1	88	41.265	ENSPEMG00000000860	Zfp94	76	41.265
ENSPEMG00000000870	Repin1	82	38.421	ENSPEMG00000020749	-	81	38.421
ENSPEMG00000000870	Repin1	70	40.299	ENSPEMG00000023213	Snai1	51	40.299
ENSPEMG00000000870	Repin1	82	31.696	ENSPEMG00000016061	Zfp574	96	31.947
ENSPEMG00000000870	Repin1	86	34.895	ENSPEMG00000017339	2610008E11Rik	75	34.507
ENSPEMG00000000870	Repin1	83	30.858	ENSPEMG00000016745	Zfp319	90	33.140
ENSPEMG00000000870	Repin1	91	35.052	ENSPEMG00000008817	-	92	35.052
ENSPEMG00000000870	Repin1	93	35.429	ENSPEMG00000000548	-	89	38.050
ENSPEMG00000000870	Repin1	82	35.410	ENSPEMG00000020934	-	91	35.088
ENSPEMG00000000870	Repin1	83	35.165	ENSPEMG00000011776	-	81	34.286
ENSPEMG00000000870	Repin1	83	37.429	ENSPEMG00000024167	Zfp354a	67	40.356
ENSPEMG00000000870	Repin1	83	34.364	ENSPEMG00000021923	Zbtb17	58	35.294
ENSPEMG00000000870	Repin1	82	37.572	ENSPEMG00000018947	Zfp784	65	39.884
ENSPEMG00000000870	Repin1	74	37.500	ENSPEMG00000011739	Snai2	82	37.226
ENSPEMG00000000870	Repin1	82	36.283	ENSPEMG00000005321	Patz1	62	36.283
ENSPEMG00000000870	Repin1	82	34.104	ENSPEMG00000023329	-	82	34.104
ENSPEMG00000000870	Repin1	84	35.817	ENSPEMG00000020736	Zfp672	95	36.389
ENSPEMG00000000870	Repin1	82	36.050	ENSPEMG00000022945	-	68	36.050
ENSPEMG00000000870	Repin1	82	39.623	ENSPEMG00000023566	Zfp768	62	41.593
ENSPEMG00000000870	Repin1	84	40.719	ENSPEMG00000000472	Zfp28	55	40.719
ENSPEMG00000000870	Repin1	83	46.073	ENSPEMG00000009113	Zfp628	64	45.050
ENSPEMG00000000870	Repin1	82	36.429	ENSPEMG00000007241	-	95	36.028
ENSPEMG00000000870	Repin1	93	35.378	ENSPEMG00000016507	Zfp26	72	35.714
ENSPEMG00000000870	Repin1	62	44.348	ENSPEMG00000015555	BC025920	97	44.348
ENSPEMG00000000870	Repin1	85	42.529	ENSPEMG00000007461	-	90	42.529
ENSPEMG00000000870	Repin1	82	38.889	ENSPEMG00000023985	Zfp61	53	38.889
ENSPEMG00000000870	Repin1	83	39.320	ENSPEMG00000007595	-	88	38.387
ENSPEMG00000000870	Repin1	82	43.077	ENSPEMG00000016757	Zfp408	58	43.077
ENSPEMG00000000870	Repin1	82	48.276	ENSPEMG00000007237	Zfp865	84	30.996
ENSPEMG00000000870	Repin1	82	36.885	ENSPEMG00000000403	-	74	34.894
ENSPEMG00000000870	Repin1	67	33.891	ENSPEMG00000023302	-	73	33.891
ENSPEMG00000000870	Repin1	85	35.366	ENSPEMG00000015523	Zfp423	99	31.724
ENSPEMG00000000870	Repin1	82	33.200	ENSPEMG00000022834	Zfp709	89	32.680
ENSPEMG00000000870	Repin1	91	33.540	ENSPEMG00000023883	-	88	33.333
ENSPEMG00000000870	Repin1	83	37.162	ENSPEMG00000008173	-	97	36.538
ENSPEMG00000000870	Repin1	83	36.086	ENSPEMG00000010242	-	71	36.086
ENSPEMG00000000870	Repin1	83	34.574	ENSPEMG00000016975	Zfp940	74	37.578
ENSPEMG00000000870	Repin1	82	37.107	ENSPEMG00000014281	-	100	54.386
ENSPEMG00000000870	Repin1	86	42.966	ENSPEMG00000014415	Zfp1	67	42.966
ENSPEMG00000000870	Repin1	88	33.333	ENSPEMG00000014980	Zfp64	93	33.333
ENSPEMG00000000870	Repin1	85	36.970	ENSPEMG00000018022	-	68	36.610
ENSPEMG00000000870	Repin1	81	47.287	ENSPEMG00000022216	-	100	47.287

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000870	Repin1	91	85.036	ENSCHIG00000019982	REPIN1	100	85.401	Capra_hircus
ENSPEMG00000000870	Repin1	98	91.414	ENSCGRG00001017330	Repin1	98	91.414	Cricetulus_griseus_chok1gshd
ENSPEMG00000000870	Repin1	99	90.333	ENSCGRG00000015472	Repin1	100	90.333	Cricetulus_griseus_crigri
ENSPEMG00000000870	Repin1	99	87.934	ENSMAUG00000005776	Repin1	100	93.807	Mesocricetus_auratus
ENSPEMG00000000870	Repin1	100	94.205	ENSMOCG00000021124	Repin1	100	94.205	Microtus_ochrogaster
ENSPEMG00000000870	Repin1	91	50.200	ENSMODG00000003616	-	92	49.600	Monodelphis_domestica
ENSPEMG00000000870	Repin1	100	91.060	MGP_CAROLIEiJ_G0028343	Repin1	100	92.701	Mus_caroli
ENSPEMG00000000870	Repin1	100	90.728	ENSMUSG00000052751	Repin1	100	92.336	Mus_musculus
ENSPEMG00000000870	Repin1	100	91.391	MGP_PahariEiJ_G0022097	Repin1	100	92.701	Mus_pahari
ENSPEMG00000000870	Repin1	100	90.728	MGP_SPRETEiJ_G0029346	Repin1	100	92.518	Mus_spretus
ENSPEMG00000000870	Repin1	100	91.391	ENSRNOG00000008239	Repin1	100	91.391	Rattus_norvegicus