EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000000884 (Gene tree)
Gene ID: 102906988
Gene Symbol: Ptcd2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 28715 bases
Position: chrKI616060.1:921903-950617
Accession: 102906988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000001206	PPR	PF01535.20	9.1e-07	1	1
ENSPEMP00000001206	MRP-S27	PF10037.9	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000001236	-	1726	XM_006994417	ENSPEMP00000001206	383 (aa)	XP_006994479	UPI00042AC6BB

Gene Model

Click here to download ENSPEMG00000000884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000884	Ptcd2	100	73.506	ENSG00000049883	PTCD2	99	73.506	Homo_sapiens
ENSPEMG00000000884	Ptcd2	96	47.541	ENSAPOG00000020682	ptcd2	93	47.541	Acanthochromis_polyacanthus
ENSPEMG00000000884	Ptcd2	100	71.169	ENSAMEG00000007194	PTCD2	99	71.169	Ailuropoda_melanoleuca
ENSPEMG00000000884	Ptcd2	91	44.160	ENSACIG00000002053	ptcd2	100	44.160	Amphilophus_citrinellus
ENSPEMG00000000884	Ptcd2	97	45.600	ENSAOCG00000006616	ptcd2	95	45.600	Amphiprion_ocellaris
ENSPEMG00000000884	Ptcd2	97	45.699	ENSAPEG00000022926	ptcd2	94	45.699	Amphiprion_percula
ENSPEMG00000000884	Ptcd2	93	58.989	ENSACAG00000009747	PTCD2	91	58.989	Anolis_carolinensis
ENSPEMG00000000884	Ptcd2	100	74.545	ENSANAG00000029353	PTCD2	99	74.545	Aotus_nancymaae
ENSPEMG00000000884	Ptcd2	97	46.649	ENSACLG00000027742	ptcd2	95	46.649	Astatotilapia_calliptera
ENSPEMG00000000884	Ptcd2	86	46.951	ENSAMXG00000029404	ptcd2	88	46.951	Astyanax_mexicanus
ENSPEMG00000000884	Ptcd2	100	73.834	ENSBTAG00000014675	PTCD2	100	73.834	Bos_taurus
ENSPEMG00000000884	Ptcd2	100	73.506	ENSCJAG00000016364	PTCD2	99	73.506	Callithrix_jacchus
ENSPEMG00000000884	Ptcd2	100	71.169	ENSCAFG00000007982	PTCD2	90	71.169	Canis_familiaris
ENSPEMG00000000884	Ptcd2	91	72.414	ENSCAFG00020019147	PTCD2	97	72.414	Canis_lupus_dingo
ENSPEMG00000000884	Ptcd2	100	75.389	ENSCHIG00000017118	PTCD2	100	75.389	Capra_hircus
ENSPEMG00000000884	Ptcd2	100	70.649	ENSCPOG00000040168	PTCD2	100	70.649	Cavia_porcellus
ENSPEMG00000000884	Ptcd2	80	70.779	ENSCCAG00000021996	-	95	70.779	Cebus_capucinus
ENSPEMG00000000884	Ptcd2	100	74.026	ENSCCAG00000029389	-	99	74.026	Cebus_capucinus
ENSPEMG00000000884	Ptcd2	100	72.727	ENSCATG00000019069	PTCD2	100	72.727	Cercocebus_atys
ENSPEMG00000000884	Ptcd2	97	73.727	ENSCLAG00000000072	PTCD2	97	73.727	Chinchilla_lanigera
ENSPEMG00000000884	Ptcd2	100	72.727	ENSCSAG00000015623	PTCD2	100	72.727	Chlorocebus_sabaeus
ENSPEMG00000000884	Ptcd2	91	53.714	ENSCHOG00000010634	PTCD2	100	53.714	Choloepus_hoffmanni
ENSPEMG00000000884	Ptcd2	94	56.510	ENSCPBG00000000216	PTCD2	92	56.510	Chrysemys_picta_bellii
ENSPEMG00000000884	Ptcd2	100	72.208	ENSCANG00000035636	PTCD2	99	72.208	Colobus_angolensis_palliatus
ENSPEMG00000000884	Ptcd2	100	86.684	ENSCGRG00001015289	Ptcd2	84	86.684	Cricetulus_griseus_chok1gshd
ENSPEMG00000000884	Ptcd2	100	86.684	ENSCGRG00000006193	Ptcd2	84	86.684	Cricetulus_griseus_crigri
ENSPEMG00000000884	Ptcd2	91	46.286	ENSCVAG00000001285	ptcd2	89	46.286	Cyprinodon_variegatus
ENSPEMG00000000884	Ptcd2	97	44.744	ENSDARG00000035391	ptcd2	96	44.744	Danio_rerio
ENSPEMG00000000884	Ptcd2	100	71.948	ENSDNOG00000008719	PTCD2	100	71.948	Dasypus_novemcinctus
ENSPEMG00000000884	Ptcd2	100	72.494	ENSDORG00000004921	Ptcd2	100	72.494	Dipodomys_ordii
ENSPEMG00000000884	Ptcd2	100	65.544	ENSETEG00000016542	PTCD2	99	65.544	Echinops_telfairi
ENSPEMG00000000884	Ptcd2	100	75.000	ENSEASG00005018038	PTCD2	100	75.000	Equus_asinus_asinus
ENSPEMG00000000884	Ptcd2	100	74.479	ENSECAG00000007022	PTCD2	98	74.479	Equus_caballus
ENSPEMG00000000884	Ptcd2	100	65.974	ENSEEUG00000014031	PTCD2	99	65.974	Erinaceus_europaeus
ENSPEMG00000000884	Ptcd2	93	50.704	ENSELUG00000003584	ptcd2	92	50.704	Esox_lucius
ENSPEMG00000000884	Ptcd2	96	68.937	ENSFCAG00000045432	PTCD2	78	68.937	Felis_catus
ENSPEMG00000000884	Ptcd2	86	54.103	ENSFALG00000010299	PTCD2	99	54.103	Ficedula_albicollis
ENSPEMG00000000884	Ptcd2	100	71.429	ENSFDAG00000018461	PTCD2	100	71.429	Fukomys_damarensis
ENSPEMG00000000884	Ptcd2	91	48.725	ENSGMOG00000003637	ptcd2	91	48.725	Gadus_morhua
ENSPEMG00000000884	Ptcd2	88	53.412	ENSGALG00000038260	PTCD2	88	53.412	Gallus_gallus
ENSPEMG00000000884	Ptcd2	95	61.035	ENSGAGG00000021952	PTCD2	94	61.035	Gopherus_agassizii
ENSPEMG00000000884	Ptcd2	100	73.766	ENSGGOG00000010695	PTCD2	99	73.766	Gorilla_gorilla
ENSPEMG00000000884	Ptcd2	97	46.649	ENSHBUG00000009191	ptcd2	95	46.649	Haplochromis_burtoni
ENSPEMG00000000884	Ptcd2	100	73.247	ENSHGLG00000001234	PTCD2	100	73.247	Heterocephalus_glaber_female
ENSPEMG00000000884	Ptcd2	100	73.247	ENSHGLG00100015419	PTCD2	100	73.247	Heterocephalus_glaber_male
ENSPEMG00000000884	Ptcd2	91	49.573	ENSHCOG00000001703	ptcd2	90	50.427	Hippocampus_comes
ENSPEMG00000000884	Ptcd2	85	47.401	ENSIPUG00000006080	ptcd2	91	47.278	Ictalurus_punctatus
ENSPEMG00000000884	Ptcd2	99	75.196	ENSSTOG00000006596	PTCD2	99	75.196	Ictidomys_tridecemlineatus
ENSPEMG00000000884	Ptcd2	100	77.143	ENSJJAG00000024388	Ptcd2	100	77.143	Jaculus_jaculus
ENSPEMG00000000884	Ptcd2	94	43.750	ENSKMAG00000009329	ptcd2	95	43.750	Kryptolebias_marmoratus
ENSPEMG00000000884	Ptcd2	97	45.576	ENSLBEG00000024871	ptcd2	94	45.576	Labrus_bergylta
ENSPEMG00000000884	Ptcd2	100	54.167	ENSLOCG00000011122	ptcd2	99	54.167	Lepisosteus_oculatus
ENSPEMG00000000884	Ptcd2	81	73.633	ENSLAFG00000004115	PTCD2	100	73.633	Loxodonta_africana
ENSPEMG00000000884	Ptcd2	100	72.727	ENSMFAG00000031516	PTCD2	99	72.727	Macaca_fascicularis
ENSPEMG00000000884	Ptcd2	100	72.468	ENSMNEG00000007537	PTCD2	100	72.468	Macaca_nemestrina
ENSPEMG00000000884	Ptcd2	100	72.987	ENSMLEG00000031093	PTCD2	99	72.987	Mandrillus_leucophaeus
ENSPEMG00000000884	Ptcd2	96	49.319	ENSMAMG00000018529	ptcd2	94	49.319	Mastacembelus_armatus
ENSPEMG00000000884	Ptcd2	97	46.649	ENSMZEG00005003625	ptcd2	95	46.649	Maylandia_zebra
ENSPEMG00000000884	Ptcd2	91	52.286	ENSMGAG00000005033	PTCD2	100	52.286	Meleagris_gallopavo
ENSPEMG00000000884	Ptcd2	100	68.912	ENSMAUG00000020253	Ptcd2	100	68.912	Mesocricetus_auratus
ENSPEMG00000000884	Ptcd2	100	75.844	ENSMICG00000004535	PTCD2	99	75.844	Microcebus_murinus
ENSPEMG00000000884	Ptcd2	100	88.773	ENSMOCG00000019985	Ptcd2	100	88.773	Microtus_ochrogaster
ENSPEMG00000000884	Ptcd2	93	58.146	ENSMODG00000001695	PTCD2	92	58.146	Monodelphis_domestica
ENSPEMG00000000884	Ptcd2	93	48.459	ENSMALG00000022372	ptcd2	93	48.459	Monopterus_albus
ENSPEMG00000000884	Ptcd2	100	80.157	MGP_CAROLIEiJ_G0018829	Ptcd2	100	80.157	Mus_caroli
ENSPEMG00000000884	Ptcd2	100	79.112	ENSMUSG00000021650	Ptcd2	100	79.112	Mus_musculus
ENSPEMG00000000884	Ptcd2	100	81.984	MGP_PahariEiJ_G0015904	Ptcd2	100	81.984	Mus_pahari
ENSPEMG00000000884	Ptcd2	100	79.373	MGP_SPRETEiJ_G0019711	Ptcd2	100	79.373	Mus_spretus
ENSPEMG00000000884	Ptcd2	97	73.995	ENSMPUG00000014401	PTCD2	97	73.995	Mustela_putorius_furo
ENSPEMG00000000884	Ptcd2	100	73.506	ENSMLUG00000007374	PTCD2	99	73.506	Myotis_lucifugus
ENSPEMG00000000884	Ptcd2	100	76.364	ENSNGAG00000005027	Ptcd2	100	76.364	Nannospalax_galili
ENSPEMG00000000884	Ptcd2	87	46.687	ENSNBRG00000000092	-	100	46.687	Neolamprologus_brichardi
ENSPEMG00000000884	Ptcd2	97	47.027	ENSNBRG00000008174	ptcd2	96	47.027	Neolamprologus_brichardi
ENSPEMG00000000884	Ptcd2	100	72.987	ENSNLEG00000004516	PTCD2	99	72.987	Nomascus_leucogenys
ENSPEMG00000000884	Ptcd2	83	50.633	ENSMEUG00000014012	-	82	50.633	Notamacropus_eugenii
ENSPEMG00000000884	Ptcd2	100	69.351	ENSOPRG00000007290	PTCD2	99	69.351	Ochotona_princeps
ENSPEMG00000000884	Ptcd2	100	72.727	ENSODEG00000016417	PTCD2	100	72.727	Octodon_degus
ENSPEMG00000000884	Ptcd2	81	47.896	ENSONIG00000011269	ptcd2	90	47.896	Oreochromis_niloticus
ENSPEMG00000000884	Ptcd2	96	73.025	ENSOCUG00000007970	PTCD2	100	72.468	Oryctolagus_cuniculus
ENSPEMG00000000884	Ptcd2	96	47.154	ENSORLG00000003851	ptcd2	92	47.154	Oryzias_latipes
ENSPEMG00000000884	Ptcd2	96	46.341	ENSORLG00020009823	ptcd2	94	46.341	Oryzias_latipes_hni
ENSPEMG00000000884	Ptcd2	91	47.414	ENSORLG00015016777	ptcd2	99	47.414	Oryzias_latipes_hsok
ENSPEMG00000000884	Ptcd2	91	45.690	ENSOMEG00000012396	ptcd2	84	45.690	Oryzias_melastigma
ENSPEMG00000000884	Ptcd2	100	71.429	ENSOGAG00000008390	PTCD2	99	71.429	Otolemur_garnettii
ENSPEMG00000000884	Ptcd2	100	75.130	ENSOARG00000005087	PTCD2	99	75.130	Ovis_aries
ENSPEMG00000000884	Ptcd2	100	73.766	ENSPPAG00000028480	PTCD2	99	73.766	Pan_paniscus
ENSPEMG00000000884	Ptcd2	100	73.506	ENSPTRG00000016968	PTCD2	99	73.506	Pan_troglodytes
ENSPEMG00000000884	Ptcd2	91	75.216	ENSPANG00000006611	PTCD2	89	75.216	Papio_anubis
ENSPEMG00000000884	Ptcd2	93	47.911	ENSPKIG00000019896	ptcd2	93	47.911	Paramormyrops_kingsleyae
ENSPEMG00000000884	Ptcd2	83	60.883	ENSPSIG00000014559	PTCD2	98	60.883	Pelodiscus_sinensis
ENSPEMG00000000884	Ptcd2	100	56.995	ENSPCIG00000029047	PTCD2	100	56.995	Phascolarctos_cinereus
ENSPEMG00000000884	Ptcd2	91	44.857	ENSPLAG00000010456	ptcd2	96	44.504	Poecilia_latipinna
ENSPEMG00000000884	Ptcd2	91	46.286	ENSPREG00000021797	ptcd2	88	46.286	Poecilia_reticulata
ENSPEMG00000000884	Ptcd2	100	63.896	ENSPPYG00000015543	PTCD2	99	63.896	Pongo_abelii
ENSPEMG00000000884	Ptcd2	75	62.153	ENSPCAG00000006806	PTCD2	92	62.153	Procavia_capensis
ENSPEMG00000000884	Ptcd2	100	71.169	ENSPVAG00000010935	PTCD2	99	71.169	Pteropus_vampyrus
ENSPEMG00000000884	Ptcd2	97	46.649	ENSPNYG00000003122	ptcd2	95	46.649	Pundamilia_nyererei
ENSPEMG00000000884	Ptcd2	95	49.176	ENSPNAG00000021490	ptcd2	94	49.176	Pygocentrus_nattereri
ENSPEMG00000000884	Ptcd2	100	81.723	ENSRNOG00000028403	Ptcd2	100	81.723	Rattus_norvegicus
ENSPEMG00000000884	Ptcd2	100	68.571	ENSRBIG00000032929	PTCD2	99	68.571	Rhinopithecus_bieti
ENSPEMG00000000884	Ptcd2	100	72.208	ENSRROG00000000080	PTCD2	100	72.208	Rhinopithecus_roxellana
ENSPEMG00000000884	Ptcd2	100	72.727	ENSSBOG00000018911	PTCD2	100	72.727	Saimiri_boliviensis_boliviensis
ENSPEMG00000000884	Ptcd2	93	59.551	ENSSHAG00000003833	PTCD2	91	59.551	Sarcophilus_harrisii
ENSPEMG00000000884	Ptcd2	84	49.226	ENSSFOG00015015415	ptcd2	84	49.226	Scleropages_formosus
ENSPEMG00000000884	Ptcd2	91	44.986	ENSSMAG00000010350	ptcd2	90	44.986	Scophthalmus_maximus
ENSPEMG00000000884	Ptcd2	96	49.727	ENSSDUG00000008142	ptcd2	89	49.727	Seriola_dumerili
ENSPEMG00000000884	Ptcd2	96	49.727	ENSSLDG00000015284	ptcd2	93	49.727	Seriola_lalandi_dorsalis
ENSPEMG00000000884	Ptcd2	80	63.107	ENSSARG00000004983	PTCD2	99	63.107	Sorex_araneus
ENSPEMG00000000884	Ptcd2	85	55.692	ENSSPUG00000000176	PTCD2	83	55.692	Sphenodon_punctatus
ENSPEMG00000000884	Ptcd2	96	46.721	ENSSPAG00000008591	ptcd2	92	46.721	Stegastes_partitus
ENSPEMG00000000884	Ptcd2	100	74.674	ENSSSCG00000016975	PTCD2	90	74.674	Sus_scrofa
ENSPEMG00000000884	Ptcd2	86	54.545	ENSTGUG00000005705	PTCD2	95	54.545	Taeniopygia_guttata
ENSPEMG00000000884	Ptcd2	100	71.688	ENSTBEG00000016559	PTCD2	99	71.688	Tupaia_belangeri
ENSPEMG00000000884	Ptcd2	100	73.834	ENSTTRG00000011851	PTCD2	99	73.834	Tursiops_truncatus
ENSPEMG00000000884	Ptcd2	97	72.118	ENSUAMG00000007583	PTCD2	87	72.118	Ursus_americanus
ENSPEMG00000000884	Ptcd2	97	71.850	ENSUMAG00000007666	PTCD2	97	71.850	Ursus_maritimus
ENSPEMG00000000884	Ptcd2	100	72.021	ENSVPAG00000009597	PTCD2	99	72.021	Vicugna_pacos
ENSPEMG00000000884	Ptcd2	100	71.169	ENSVVUG00000007299	-	100	71.169	Vulpes_vulpes
ENSPEMG00000000884	Ptcd2	92	55.524	ENSXETG00000031652	PTCD2	92	55.524	Xenopus_tropicalis
ENSPEMG00000000884	Ptcd2	85	46.483	ENSXMAG00000005940	ptcd2	82	46.000	Xiphophorus_maculatus