EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000000918 (Gene tree)
Gene ID: 102906866
Gene Symbol: Zc3h6
Alias: -
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 55594 bases
Position: chrKI615829.1:76392-131985
Accession: 102906866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000001249	zf-CCCH	PF00642.24	1.3e-11	1	2
ENSPEMP00000001249	zf-CCCH	PF00642.24	1.3e-11	2	2
ENSPEMP00000001264	zf-CCCH	PF00642.24	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000001300	-	4540	XM_006991183	ENSPEMP00000001249	1170 (aa)	XP_006991245	-
ENSPEMT00000001321	-	3474	-	ENSPEMP00000001264	1157 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000000918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000000918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000000918	Zc3h6	66	49.533	ENSPEMG00000009762	Zc3h4	75	38.251

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000000918	Zc3h6	100	76.852	ENSG00000188177	ZC3H6	99	76.852	Homo_sapiens
ENSPEMG00000000918	Zc3h6	65	60.699	ENSAPOG00000002681	zc3h6	88	44.681	Acanthochromis_polyacanthus
ENSPEMG00000000918	Zc3h6	100	73.737	ENSAMEG00000016194	ZC3H6	99	73.485	Ailuropoda_melanoleuca
ENSPEMG00000000918	Zc3h6	62	66.495	ENSACIG00000021843	zc3h6	83	43.560	Amphilophus_citrinellus
ENSPEMG00000000918	Zc3h6	81	38.763	ENSATEG00000019063	zc3h6	98	38.076	Anabas_testudineus
ENSPEMG00000000918	Zc3h6	100	59.167	ENSAPLG00000014287	ZC3H6	99	59.833	Anas_platyrhynchos
ENSPEMG00000000918	Zc3h6	100	76.030	ENSANAG00000024229	ZC3H6	99	76.030	Aotus_nancymaae
ENSPEMG00000000918	Zc3h6	63	64.423	ENSACLG00000026343	zc3h6	88	44.636	Astatotilapia_calliptera
ENSPEMG00000000918	Zc3h6	100	76.451	ENSCJAG00000016479	ZC3H6	99	76.451	Callithrix_jacchus
ENSPEMG00000000918	Zc3h6	100	73.968	ENSCAFG00000007160	ZC3H6	99	72.873	Canis_familiaris
ENSPEMG00000000918	Zc3h6	100	72.957	ENSCAFG00020017525	ZC3H6	99	72.265	Canis_lupus_dingo
ENSPEMG00000000918	Zc3h6	82	72.947	ENSCHIG00000019719	-	97	72.421	Capra_hircus
ENSPEMG00000000918	Zc3h6	100	76.599	ENSTSYG00000031857	ZC3H6	99	75.673	Carlito_syrichta
ENSPEMG00000000918	Zc3h6	100	72.458	ENSCPOG00000003445	ZC3H6	100	73.797	Cavia_porcellus
ENSPEMG00000000918	Zc3h6	100	77.273	ENSCATG00000036595	ZC3H6	100	76.645	Cercocebus_atys
ENSPEMG00000000918	Zc3h6	91	75.255	ENSCLAG00000006605	ZC3H6	100	75.255	Chinchilla_lanigera
ENSPEMG00000000918	Zc3h6	91	76.460	ENSCSAG00000016793	ZC3H6	100	76.460	Chlorocebus_sabaeus
ENSPEMG00000000918	Zc3h6	100	77.441	ENSCANG00000041036	ZC3H6	100	77.441	Colobus_angolensis_palliatus
ENSPEMG00000000918	Zc3h6	100	84.987	ENSCGRG00001022022	Zc3h6	99	84.987	Cricetulus_griseus_chok1gshd
ENSPEMG00000000918	Zc3h6	100	88.115	ENSCGRG00000016162	Zc3h6	100	88.115	Cricetulus_griseus_crigri
ENSPEMG00000000918	Zc3h6	68	56.439	ENSCSEG00000012267	zc3h6	86	50.000	Cynoglossus_semilaevis
ENSPEMG00000000918	Zc3h6	100	68.293	ENSDNOG00000044811	ZC3H6	99	68.124	Dasypus_novemcinctus
ENSPEMG00000000918	Zc3h6	100	73.799	ENSDORG00000013967	Zc3h6	100	73.463	Dipodomys_ordii
ENSPEMG00000000918	Zc3h6	85	75.475	ENSEASG00005006493	ZC3H6	99	74.975	Equus_asinus_asinus
ENSPEMG00000000918	Zc3h6	100	75.737	ENSECAG00000023620	ZC3H6	99	75.316	Equus_caballus
ENSPEMG00000000918	Zc3h6	82	68.216	ENSEEUG00000013883	-	84	68.045	Erinaceus_europaeus
ENSPEMG00000000918	Zc3h6	100	75.147	ENSFCAG00000008089	ZC3H6	99	74.810	Felis_catus
ENSPEMG00000000918	Zc3h6	100	59.167	ENSFALG00000011589	ZC3H6	99	59.333	Ficedula_albicollis
ENSPEMG00000000918	Zc3h6	100	75.443	ENSFDAG00000002521	ZC3H6	99	75.612	Fukomys_damarensis
ENSPEMG00000000918	Zc3h6	100	58.784	ENSGALG00000008269	ZC3H6	97	59.700	Gallus_gallus
ENSPEMG00000000918	Zc3h6	62	61.140	ENSGAFG00000006771	zc3h6	72	61.140	Gambusia_affinis
ENSPEMG00000000918	Zc3h6	83	43.939	ENSGACG00000005343	zc3h6	99	38.259	Gasterosteus_aculeatus
ENSPEMG00000000918	Zc3h6	100	61.199	ENSGAGG00000010857	ZC3H6	100	60.601	Gopherus_agassizii
ENSPEMG00000000918	Zc3h6	100	77.020	ENSGGOG00000001665	ZC3H6	99	77.020	Gorilla_gorilla
ENSPEMG00000000918	Zc3h6	63	64.423	ENSHBUG00000010088	zc3h6	88	44.636	Haplochromis_burtoni
ENSPEMG00000000918	Zc3h6	99	75.632	ENSHGLG00000011882	ZC3H6	96	75.801	Heterocephalus_glaber_female
ENSPEMG00000000918	Zc3h6	99	75.236	ENSHGLG00100002559	ZC3H6	100	75.150	Heterocephalus_glaber_male
ENSPEMG00000000918	Zc3h6	82	44.543	ENSHCOG00000012519	zc3h6	86	43.897	Hippocampus_comes
ENSPEMG00000000918	Zc3h6	91	76.766	ENSSTOG00000008120	-	100	76.673	Ictidomys_tridecemlineatus
ENSPEMG00000000918	Zc3h6	100	77.046	ENSJJAG00000013206	Zc3h6	99	77.300	Jaculus_jaculus
ENSPEMG00000000918	Zc3h6	99	41.901	ENSKMAG00000016252	zc3h6	98	45.259	Kryptolebias_marmoratus
ENSPEMG00000000918	Zc3h6	59	64.767	ENSLBEG00000003054	zc3h6	89	40.452	Labrus_bergylta
ENSPEMG00000000918	Zc3h6	100	46.123	ENSLACG00000012014	ZC3H6	99	46.534	Latimeria_chalumnae
ENSPEMG00000000918	Zc3h6	100	43.186	ENSLOCG00000016548	zc3h6	97	43.421	Lepisosteus_oculatus
ENSPEMG00000000918	Zc3h6	93	69.612	ENSLAFG00000001151	ZC3H6	100	69.627	Loxodonta_africana
ENSPEMG00000000918	Zc3h6	100	77.104	ENSMFAG00000036963	ZC3H6	99	77.104	Macaca_fascicularis
ENSPEMG00000000918	Zc3h6	100	77.104	ENSMMUG00000016430	ZC3H6	99	77.104	Macaca_mulatta
ENSPEMG00000000918	Zc3h6	100	76.852	ENSMNEG00000031225	ZC3H6	100	76.274	Macaca_nemestrina
ENSPEMG00000000918	Zc3h6	100	77.273	ENSMLEG00000038821	ZC3H6	99	77.273	Mandrillus_leucophaeus
ENSPEMG00000000918	Zc3h6	100	36.855	ENSMAMG00000021546	zc3h6	92	42.710	Mastacembelus_armatus
ENSPEMG00000000918	Zc3h6	63	64.423	ENSMZEG00005006828	zc3h6	88	44.636	Maylandia_zebra
ENSPEMG00000000918	Zc3h6	100	59.117	ENSMGAG00000003025	ZC3H6	99	59.700	Meleagris_gallopavo
ENSPEMG00000000918	Zc3h6	100	87.436	ENSMAUG00000017009	Zc3h6	99	87.436	Mesocricetus_auratus
ENSPEMG00000000918	Zc3h6	100	77.441	ENSMICG00000036353	ZC3H6	99	77.441	Microcebus_murinus
ENSPEMG00000000918	Zc3h6	100	86.842	ENSMOCG00000002054	Zc3h6	99	86.842	Microtus_ochrogaster
ENSPEMG00000000918	Zc3h6	100	61.679	ENSMODG00000006612	ZC3H6	99	61.809	Monodelphis_domestica
ENSPEMG00000000918	Zc3h6	69	53.929	ENSMALG00000002048	zc3h6	97	41.972	Monopterus_albus
ENSPEMG00000000918	Zc3h6	100	82.119	MGP_CAROLIEiJ_G0024278	Zc3h6	99	82.119	Mus_caroli
ENSPEMG00000000918	Zc3h6	100	82.203	ENSMUSG00000042851	Zc3h6	99	82.203	Mus_musculus
ENSPEMG00000000918	Zc3h6	100	82.881	MGP_PahariEiJ_G0025723	Zc3h6	99	82.881	Mus_pahari
ENSPEMG00000000918	Zc3h6	100	82.797	MGP_SPRETEiJ_G0025198	Zc3h6	99	82.797	Mus_spretus
ENSPEMG00000000918	Zc3h6	91	73.216	ENSMPUG00000009624	ZC3H6	100	73.216	Mustela_putorius_furo
ENSPEMG00000000918	Zc3h6	100	71.801	ENSMLUG00000004896	ZC3H6	99	71.970	Myotis_lucifugus
ENSPEMG00000000918	Zc3h6	95	77.196	ENSNGAG00000013596	Zc3h6	99	77.204	Nannospalax_galili
ENSPEMG00000000918	Zc3h6	60	64.216	ENSNBRG00000015382	zc3h6	82	43.192	Neolamprologus_brichardi
ENSPEMG00000000918	Zc3h6	99	76.610	ENSNLEG00000033657	ZC3H6	99	76.525	Nomascus_leucogenys
ENSPEMG00000000918	Zc3h6	100	71.693	ENSOPRG00000012717	ZC3H6	99	71.609	Ochotona_princeps
ENSPEMG00000000918	Zc3h6	95	74.757	ENSODEG00000009099	ZC3H6	99	74.934	Octodon_degus
ENSPEMG00000000918	Zc3h6	63	63.942	ENSONIG00000009880	zc3h6	88	44.656	Oreochromis_niloticus
ENSPEMG00000000918	Zc3h6	100	63.370	ENSOANG00000012054	-	96	63.705	Ornithorhynchus_anatinus
ENSPEMG00000000918	Zc3h6	96	74.318	ENSOCUG00000011125	ZC3H6	100	74.074	Oryctolagus_cuniculus
ENSPEMG00000000918	Zc3h6	89	40.975	ENSORLG00000011179	zc3h6	89	44.970	Oryzias_latipes
ENSPEMG00000000918	Zc3h6	89	40.614	ENSORLG00020017202	zc3h6	89	44.970	Oryzias_latipes_hni
ENSPEMG00000000918	Zc3h6	89	40.794	ENSORLG00015001664	zc3h6	89	45.168	Oryzias_latipes_hsok
ENSPEMG00000000918	Zc3h6	99	36.990	ENSOMEG00000001296	zc3h6	85	48.026	Oryzias_melastigma
ENSPEMG00000000918	Zc3h6	100	76.515	ENSOGAG00000002556	ZC3H6	99	76.515	Otolemur_garnettii
ENSPEMG00000000918	Zc3h6	100	72.834	ENSOARG00000014503	ZC3H6	99	72.498	Ovis_aries
ENSPEMG00000000918	Zc3h6	100	77.020	ENSPPAG00000030495	ZC3H6	100	77.020	Pan_paniscus
ENSPEMG00000000918	Zc3h6	100	74.895	ENSPPRG00000005673	ZC3H6	99	74.558	Panthera_pardus
ENSPEMG00000000918	Zc3h6	100	73.884	ENSPTIG00000015800	ZC3H6	99	74.361	Panthera_tigris_altaica
ENSPEMG00000000918	Zc3h6	100	77.020	ENSPTRG00000012363	ZC3H6	99	77.020	Pan_troglodytes
ENSPEMG00000000918	Zc3h6	100	77.104	ENSPANG00000025224	ZC3H6	99	77.104	Papio_anubis
ENSPEMG00000000918	Zc3h6	62	67.188	ENSPKIG00000007353	zc3h6	91	42.488	Paramormyrops_kingsleyae
ENSPEMG00000000918	Zc3h6	99	61.274	ENSPSIG00000002520	ZC3H6	100	61.442	Pelodiscus_sinensis
ENSPEMG00000000918	Zc3h6	91	64.516	ENSPCIG00000029741	ZC3H6	100	64.516	Phascolarctos_cinereus
ENSPEMG00000000918	Zc3h6	63	62.500	ENSPFOG00000015748	zc3h6	86	47.692	Poecilia_formosa
ENSPEMG00000000918	Zc3h6	63	62.500	ENSPLAG00000002469	zc3h6	86	47.692	Poecilia_latipinna
ENSPEMG00000000918	Zc3h6	61	65.775	ENSPMEG00000020802	zc3h6	83	65.775	Poecilia_mexicana
ENSPEMG00000000918	Zc3h6	64	60.360	ENSPREG00000023126	zc3h6	89	40.177	Poecilia_reticulata
ENSPEMG00000000918	Zc3h6	78	67.384	ENSPCAG00000015468	ZC3H6	77	67.061	Procavia_capensis
ENSPEMG00000000918	Zc3h6	100	77.104	ENSPCOG00000016627	ZC3H6	99	76.599	Propithecus_coquereli
ENSPEMG00000000918	Zc3h6	70	84.158	ENSPVAG00000013728	ZC3H6	70	84.158	Pteropus_vampyrus
ENSPEMG00000000918	Zc3h6	63	64.216	ENSPNYG00000018130	zc3h6	84	43.192	Pundamilia_nyererei
ENSPEMG00000000918	Zc3h6	100	39.120	ENSPNAG00000009331	zc3h6	97	39.009	Pygocentrus_nattereri
ENSPEMG00000000918	Zc3h6	100	82.373	ENSRNOG00000026277	Zc3h6	99	81.949	Rattus_norvegicus
ENSPEMG00000000918	Zc3h6	100	76.114	ENSSBOG00000033489	ZC3H6	100	75.463	Saimiri_boliviensis_boliviensis
ENSPEMG00000000918	Zc3h6	84	64.136	ENSSHAG00000016634	ZC3H6	99	64.136	Sarcophilus_harrisii
ENSPEMG00000000918	Zc3h6	100	37.945	ENSSFOG00015004488	zc3h6	97	39.148	Scleropages_formosus
ENSPEMG00000000918	Zc3h6	81	38.048	ENSSMAG00000008411	zc3h6	97	37.431	Scophthalmus_maximus
ENSPEMG00000000918	Zc3h6	63	64.734	ENSSDUG00000006105	zc3h6	89	43.738	Seriola_dumerili
ENSPEMG00000000918	Zc3h6	63	64.734	ENSSLDG00000021813	zc3h6	89	43.738	Seriola_lalandi_dorsalis
ENSPEMG00000000918	Zc3h6	100	68.550	ENSSARG00000001035	ZC3H6	99	68.465	Sorex_araneus
ENSPEMG00000000918	Zc3h6	58	59.055	ENSSPUG00000013031	-	70	39.306	Sphenodon_punctatus
ENSPEMG00000000918	Zc3h6	100	75.063	ENSSSCG00000008096	ZC3H6	100	75.800	Sus_scrofa
ENSPEMG00000000918	Zc3h6	100	58.716	ENSTGUG00000007468	ZC3H6	99	59.299	Taeniopygia_guttata
ENSPEMG00000000918	Zc3h6	100	38.294	ENSTRUG00000012901	zc3h6	97	38.214	Takifugu_rubripes
ENSPEMG00000000918	Zc3h6	87	38.159	ENSTNIG00000016608	zc3h6	99	38.528	Tetraodon_nigroviridis
ENSPEMG00000000918	Zc3h6	86	74.182	ENSTBEG00000016232	ZC3H6	91	74.182	Tupaia_belangeri
ENSPEMG00000000918	Zc3h6	76	81.188	ENSTTRG00000013154	ZC3H6	82	68.795	Tursiops_truncatus
ENSPEMG00000000918	Zc3h6	91	73.006	ENSUAMG00000002401	ZC3H6	100	72.727	Ursus_americanus
ENSPEMG00000000918	Zc3h6	91	73.006	ENSUMAG00000008663	ZC3H6	100	74.600	Ursus_maritimus
ENSPEMG00000000918	Zc3h6	100	74.180	ENSVPAG00000005912	ZC3H6	100	74.012	Vicugna_pacos
ENSPEMG00000000918	Zc3h6	91	73.562	ENSVVUG00000028662	ZC3H6	100	73.191	Vulpes_vulpes
ENSPEMG00000000918	Zc3h6	87	52.713	ENSXETG00000013762	zc3h6	97	52.972	Xenopus_tropicalis
ENSPEMG00000000918	Zc3h6	53	60.360	ENSXCOG00000011662	zc3h6	73	51.211	Xiphophorus_couchianus
ENSPEMG00000000918	Zc3h6	63	62.500	ENSXMAG00000020822	zc3h6	85	46.623	Xiphophorus_maculatus