EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000001788 (Gene tree)
Gene ID: 102907828
Gene Symbol: Tdp2
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 11531 bases
Position: chrKI615402.1:753034-764564
Accession: 102907828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000001883	Exo_endo_phos	PF03372.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000002322	-	1889	XM_006977130	ENSPEMP00000001883	370 (aa)	XP_006977192	UPI00042AE280

Gene Model

Click here to download ENSPEMG00000001788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000001788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000001788	Tdp2	91	70.088	ENSG00000111802	TDP2	91	74.820	Homo_sapiens
ENSPEMG00000001788	Tdp2	69	55.000	ENSAPOG00000018379	-	90	55.000	Acanthochromis_polyacanthus
ENSPEMG00000001788	Tdp2	75	75.000	ENSAMEG00000010230	TDP2	100	75.000	Ailuropoda_melanoleuca
ENSPEMG00000001788	Tdp2	70	53.030	ENSAPEG00000004208	-	94	52.453	Amphiprion_percula
ENSPEMG00000001788	Tdp2	72	48.227	ENSATEG00000010663	-	92	48.057	Anabas_testudineus
ENSPEMG00000001788	Tdp2	91	60.651	ENSACAG00000002332	TDP2	92	60.767	Anolis_carolinensis
ENSPEMG00000001788	Tdp2	91	70.381	ENSANAG00000020033	TDP2	94	70.381	Aotus_nancymaae
ENSPEMG00000001788	Tdp2	69	51.724	ENSACLG00000016174	tdp2b	88	51.724	Astatotilapia_calliptera
ENSPEMG00000001788	Tdp2	68	55.294	ENSACLG00000016148	tdp2b	92	54.231	Astatotilapia_calliptera
ENSPEMG00000001788	Tdp2	69	51.724	ENSACLG00000016132	tdp2b	88	51.724	Astatotilapia_calliptera
ENSPEMG00000001788	Tdp2	69	51.154	ENSAMXG00000036549	tdp2a	84	51.154	Astyanax_mexicanus
ENSPEMG00000001788	Tdp2	93	47.872	ENSAMXG00000011775	tdp2b	96	48.767	Astyanax_mexicanus
ENSPEMG00000001788	Tdp2	91	69.388	ENSBTAG00000000365	TDP2	94	69.388	Bos_taurus
ENSPEMG00000001788	Tdp2	88	33.131	WBGene00013405	tdpt-1	85	32.733	Caenorhabditis_elegans
ENSPEMG00000001788	Tdp2	94	68.481	ENSCJAG00000006074	TDP2	91	73.741	Callithrix_jacchus
ENSPEMG00000001788	Tdp2	94	68.195	ENSCJAG00000021963	-	94	68.915	Callithrix_jacchus
ENSPEMG00000001788	Tdp2	94	68.481	ENSCAFG00000010428	TDP2	96	76.071	Canis_familiaris
ENSPEMG00000001788	Tdp2	75	76.071	ENSCAFG00020009994	TDP2	96	76.071	Canis_lupus_dingo
ENSPEMG00000001788	Tdp2	78	73.720	ENSCHIG00000015294	-	95	75.887	Capra_hircus
ENSPEMG00000001788	Tdp2	83	68.932	ENSTSYG00000037199	TDP2	100	69.579	Carlito_syrichta
ENSPEMG00000001788	Tdp2	91	70.882	ENSCPOG00000006390	TDP2	95	70.674	Cavia_porcellus
ENSPEMG00000001788	Tdp2	94	69.054	ENSCCAG00000022734	TDP2	91	74.820	Cebus_capucinus
ENSPEMG00000001788	Tdp2	91	70.968	ENSCATG00000022076	TDP2	91	75.899	Cercocebus_atys
ENSPEMG00000001788	Tdp2	94	68.571	ENSCLAG00000002072	TDP2	95	69.501	Chinchilla_lanigera
ENSPEMG00000001788	Tdp2	94	70.487	ENSCSAG00000007769	TDP2	96	70.725	Chlorocebus_sabaeus
ENSPEMG00000001788	Tdp2	91	59.587	ENSCPBG00000006551	TDP2	87	59.412	Chrysemys_picta_bellii
ENSPEMG00000001788	Tdp2	91	70.674	ENSCANG00000040122	TDP2	92	75.540	Colobus_angolensis_palliatus
ENSPEMG00000001788	Tdp2	100	91.081	ENSCGRG00001000384	Tdp2	100	90.270	Cricetulus_griseus_chok1gshd
ENSPEMG00000001788	Tdp2	92	85.965	ENSCGRG00000010250	Tdp2	95	86.842	Cricetulus_griseus_crigri
ENSPEMG00000001788	Tdp2	91	48.870	ENSCVAG00000003114	tdp2b	96	48.870	Cyprinodon_variegatus
ENSPEMG00000001788	Tdp2	66	49.597	ENSDARG00000069941	tdp2a	55	49.597	Danio_rerio
ENSPEMG00000001788	Tdp2	90	47.253	ENSDARG00000035954	tdp2b	94	47.383	Danio_rerio
ENSPEMG00000001788	Tdp2	96	67.590	ENSDNOG00000044082	TDP2	93	69.208	Dasypus_novemcinctus
ENSPEMG00000001788	Tdp2	74	73.665	ENSETEG00000019096	TDP2	100	73.665	Echinops_telfairi
ENSPEMG00000001788	Tdp2	75	49.110	ENSEBUG00000006535	tdp2a	65	49.110	Eptatretus_burgeri
ENSPEMG00000001788	Tdp2	91	69.208	ENSEASG00005007656	TDP2	94	69.208	Equus_asinus_asinus
ENSPEMG00000001788	Tdp2	91	68.915	ENSECAG00000014264	TDP2	94	68.915	Equus_caballus
ENSPEMG00000001788	Tdp2	91	67.647	ENSEEUG00000010776	TDP2	94	67.647	Erinaceus_europaeus
ENSPEMG00000001788	Tdp2	90	49.862	ENSELUG00000016449	tdp2b	95	49.862	Esox_lucius
ENSPEMG00000001788	Tdp2	86	41.945	ENSELUG00000009321	tdp2a	87	45.714	Esox_lucius
ENSPEMG00000001788	Tdp2	96	66.759	ENSFCAG00000025612	TDP2	94	69.208	Felis_catus
ENSPEMG00000001788	Tdp2	91	55.294	ENSFALG00000004710	TDP2	94	55.425	Ficedula_albicollis
ENSPEMG00000001788	Tdp2	75	74.296	ENSFDAG00000006512	TDP2	98	74.296	Fukomys_damarensis
ENSPEMG00000001788	Tdp2	66	52.209	ENSFHEG00000013560	-	85	52.000	Fundulus_heteroclitus
ENSPEMG00000001788	Tdp2	91	59.706	ENSGALG00000013637	TDP2	92	59.531	Gallus_gallus
ENSPEMG00000001788	Tdp2	96	58.380	ENSGAGG00000002853	TDP2	87	59.706	Gopherus_agassizii
ENSPEMG00000001788	Tdp2	91	69.795	ENSGGOG00000014237	TDP2	91	74.460	Gorilla_gorilla
ENSPEMG00000001788	Tdp2	52	59.162	ENSHBUG00000005421	-	79	59.162	Haplochromis_burtoni
ENSPEMG00000001788	Tdp2	99	50.000	ENSHBUG00000002714	tdp2b	96	51.124	Haplochromis_burtoni
ENSPEMG00000001788	Tdp2	94	67.529	ENSHGLG00000008655	TDP2	95	68.732	Heterocephalus_glaber_female
ENSPEMG00000001788	Tdp2	94	67.529	ENSHGLG00100019087	TDP2	95	68.529	Heterocephalus_glaber_male
ENSPEMG00000001788	Tdp2	90	51.955	ENSIPUG00000013691	tdp2b	94	51.955	Ictalurus_punctatus
ENSPEMG00000001788	Tdp2	94	71.060	ENSJJAG00000021685	Tdp2	97	72.836	Jaculus_jaculus
ENSPEMG00000001788	Tdp2	68	52.157	ENSKMAG00000015485	-	82	52.157	Kryptolebias_marmoratus
ENSPEMG00000001788	Tdp2	91	56.484	ENSLACG00000008852	TDP2	95	55.840	Latimeria_chalumnae
ENSPEMG00000001788	Tdp2	74	57.455	ENSLOCG00000005817	tdp2b	98	57.455	Lepisosteus_oculatus
ENSPEMG00000001788	Tdp2	91	70.349	ENSLAFG00000002567	TDP2	97	70.349	Loxodonta_africana
ENSPEMG00000001788	Tdp2	91	71.261	ENSMFAG00000045296	TDP2	91	76.259	Macaca_fascicularis
ENSPEMG00000001788	Tdp2	91	71.261	ENSMMUG00000009803	TDP2	95	71.261	Macaca_mulatta
ENSPEMG00000001788	Tdp2	91	71.261	ENSMNEG00000038003	TDP2	91	76.259	Macaca_nemestrina
ENSPEMG00000001788	Tdp2	91	70.968	ENSMLEG00000028883	TDP2	91	75.899	Mandrillus_leucophaeus
ENSPEMG00000001788	Tdp2	92	50.142	ENSMAMG00000013654	tdp2b	96	50.571	Mastacembelus_armatus
ENSPEMG00000001788	Tdp2	62	48.707	ENSMZEG00005003980	-	75	48.707	Maylandia_zebra
ENSPEMG00000001788	Tdp2	74	49.640	ENSMZEG00005004126	tdp2b	91	49.640	Maylandia_zebra
ENSPEMG00000001788	Tdp2	67	52.778	ENSMZEG00005004055	tdp2b	83	52.778	Maylandia_zebra
ENSPEMG00000001788	Tdp2	69	54.789	ENSMZEG00005004153	tdp2b	92	54.789	Maylandia_zebra
ENSPEMG00000001788	Tdp2	69	49.808	ENSMZEG00005004103	tdp2b	87	49.808	Maylandia_zebra
ENSPEMG00000001788	Tdp2	99	49.479	ENSMZEG00005003950	tdp2b	96	50.562	Maylandia_zebra
ENSPEMG00000001788	Tdp2	66	56.855	ENSMZEG00005004077	tdp2b	97	51.049	Maylandia_zebra
ENSPEMG00000001788	Tdp2	91	60.767	ENSMGAG00000008014	TDP2	91	60.588	Meleagris_gallopavo
ENSPEMG00000001788	Tdp2	100	92.432	ENSMAUG00000014451	Tdp2	100	91.622	Mesocricetus_auratus
ENSPEMG00000001788	Tdp2	94	69.516	ENSMICG00000000039	TDP2	94	75.180	Microcebus_murinus
ENSPEMG00000001788	Tdp2	100	89.189	ENSMOCG00000002823	Tdp2	100	88.919	Microtus_ochrogaster
ENSPEMG00000001788	Tdp2	84	58.307	ENSMODG00000011653	TDP2	94	59.740	Monodelphis_domestica
ENSPEMG00000001788	Tdp2	66	51.200	ENSMALG00000005368	-	84	51.200	Monopterus_albus
ENSPEMG00000001788	Tdp2	100	86.757	MGP_CAROLIEiJ_G0018354	Tdp2	100	86.757	Mus_caroli
ENSPEMG00000001788	Tdp2	100	86.486	ENSMUSG00000035958	Tdp2	100	86.486	Mus_musculus
ENSPEMG00000001788	Tdp2	100	84.054	MGP_PahariEiJ_G0019417	Tdp2	100	84.054	Mus_pahari
ENSPEMG00000001788	Tdp2	100	86.400	MGP_SPRETEiJ_G0019220	Tdp2	100	85.753	Mus_spretus
ENSPEMG00000001788	Tdp2	91	70.554	ENSMPUG00000004516	TDP2	95	70.554	Mustela_putorius_furo
ENSPEMG00000001788	Tdp2	94	64.387	ENSMLUG00000013506	TDP2	95	65.116	Myotis_lucifugus
ENSPEMG00000001788	Tdp2	99	78.378	ENSNGAG00000001375	Tdp2	93	81.871	Nannospalax_galili
ENSPEMG00000001788	Tdp2	91	71.261	ENSNLEG00000002447	TDP2	96	71.261	Nomascus_leucogenys
ENSPEMG00000001788	Tdp2	92	69.275	ENSOPRG00000016299	TDP2	99	69.275	Ochotona_princeps
ENSPEMG00000001788	Tdp2	74	76.259	ENSODEG00000014018	TDP2	95	76.259	Octodon_degus
ENSPEMG00000001788	Tdp2	93	66.857	ENSOCUG00000013773	TDP2	94	67.442	Oryctolagus_cuniculus
ENSPEMG00000001788	Tdp2	68	49.020	ENSORLG00000001661	-	93	49.020	Oryzias_latipes
ENSPEMG00000001788	Tdp2	68	49.020	ENSORLG00020004634	-	93	49.020	Oryzias_latipes_hni
ENSPEMG00000001788	Tdp2	68	44.531	ENSORLG00015008190	-	92	44.531	Oryzias_latipes_hsok
ENSPEMG00000001788	Tdp2	68	51.181	ENSOMEG00000015899	-	92	51.626	Oryzias_melastigma
ENSPEMG00000001788	Tdp2	97	65.385	ENSOGAG00000025303	TDP2	94	67.052	Otolemur_garnettii
ENSPEMG00000001788	Tdp2	91	70.088	ENSPPAG00000029023	TDP2	92	74.820	Pan_paniscus
ENSPEMG00000001788	Tdp2	96	66.482	ENSPPRG00000015398	TDP2	94	68.915	Panthera_pardus
ENSPEMG00000001788	Tdp2	74	74.820	ENSPTIG00000018574	TDP2	95	74.820	Panthera_tigris_altaica
ENSPEMG00000001788	Tdp2	91	70.088	ENSPTRG00000017778	TDP2	91	74.820	Pan_troglodytes
ENSPEMG00000001788	Tdp2	91	70.674	ENSPANG00000017590	TDP2	91	75.540	Papio_anubis
ENSPEMG00000001788	Tdp2	90	50.712	ENSPKIG00000006483	tdp2b	95	50.568	Paramormyrops_kingsleyae
ENSPEMG00000001788	Tdp2	78	62.630	ENSPSIG00000004948	TDP2	99	62.630	Pelodiscus_sinensis
ENSPEMG00000001788	Tdp2	67	46.067	ENSPMAG00000001570	tdp2b	97	46.067	Petromyzon_marinus
ENSPEMG00000001788	Tdp2	91	59.012	ENSPCIG00000007316	TDP2	90	58.501	Phascolarctos_cinereus
ENSPEMG00000001788	Tdp2	72	48.718	ENSPFOG00000017990	-	98	48.718	Poecilia_formosa
ENSPEMG00000001788	Tdp2	66	50.800	ENSPLAG00000019439	-	79	50.800	Poecilia_latipinna
ENSPEMG00000001788	Tdp2	66	51.200	ENSPMEG00000010824	-	84	51.200	Poecilia_mexicana
ENSPEMG00000001788	Tdp2	91	70.088	ENSPPYG00000016282	TDP2	87	70.088	Pongo_abelii
ENSPEMG00000001788	Tdp2	91	69.706	ENSPCOG00000021415	TDP2	98	74.194	Propithecus_coquereli
ENSPEMG00000001788	Tdp2	69	51.264	ENSPNYG00000011504	tdp2b	90	51.449	Pundamilia_nyererei
ENSPEMG00000001788	Tdp2	99	48.042	ENSPNYG00000011532	tdp2b	97	48.739	Pundamilia_nyererei
ENSPEMG00000001788	Tdp2	66	52.439	ENSPNAG00000022162	tdp2a	63	52.439	Pygocentrus_nattereri
ENSPEMG00000001788	Tdp2	100	85.676	ENSRNOG00000018246	Tdp2	100	85.405	Rattus_norvegicus
ENSPEMG00000001788	Tdp2	91	70.381	ENSRBIG00000037119	TDP2	92	75.540	Rhinopithecus_bieti
ENSPEMG00000001788	Tdp2	91	70.381	ENSRROG00000005025	TDP2	92	75.180	Rhinopithecus_roxellana
ENSPEMG00000001788	Tdp2	96	67.590	ENSSBOG00000028734	TDP2	91	75.180	Saimiri_boliviensis_boliviensis
ENSPEMG00000001788	Tdp2	99	57.838	ENSSHAG00000002506	TDP2	91	59.475	Sarcophilus_harrisii
ENSPEMG00000001788	Tdp2	69	50.397	ENSSFOG00015011322	-	71	50.397	Scleropages_formosus
ENSPEMG00000001788	Tdp2	74	70.609	ENSSARG00000013547	TDP2	100	70.609	Sorex_araneus
ENSPEMG00000001788	Tdp2	91	59.829	ENSSPUG00000008288	TDP2	95	59.829	Sphenodon_punctatus
ENSPEMG00000001788	Tdp2	91	69.795	ENSSSCG00000001092	TDP2	94	69.795	Sus_scrofa
ENSPEMG00000001788	Tdp2	70	64.368	ENSTGUG00000009035	TDP2	100	64.368	Taeniopygia_guttata
ENSPEMG00000001788	Tdp2	75	48.057	ENSTRUG00000012218	-	94	48.057	Takifugu_rubripes
ENSPEMG00000001788	Tdp2	94	48.468	ENSTRUG00000014347	tdp2b	95	50.581	Takifugu_rubripes
ENSPEMG00000001788	Tdp2	95	47.826	ENSTNIG00000017792	tdp2b	96	48.876	Tetraodon_nigroviridis
ENSPEMG00000001788	Tdp2	68	51.562	ENSTNIG00000010260	TDP2	97	51.362	Tetraodon_nigroviridis
ENSPEMG00000001788	Tdp2	91	69.208	ENSTTRG00000016376	TDP2	94	69.501	Tursiops_truncatus
ENSPEMG00000001788	Tdp2	95	66.479	ENSUAMG00000025939	TDP2	95	67.742	Ursus_americanus
ENSPEMG00000001788	Tdp2	75	75.000	ENSUMAG00000020111	TDP2	93	75.000	Ursus_maritimus
ENSPEMG00000001788	Tdp2	97	57.407	ENSXETG00000014826	tdp2	95	59.270	Xenopus_tropicalis
ENSPEMG00000001788	Tdp2	68	50.965	ENSXCOG00000010778	-	72	50.965	Xiphophorus_couchianus
ENSPEMG00000001788	Tdp2	68	51.163	ENSXMAG00000022252	-	74	51.163	Xiphophorus_maculatus