EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000001823 (Gene tree)
Gene ID: 102911439
Gene Symbol: Srrm4
Alias: -
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 157500 bases
Position: chrKI615323.1:11573079-11730578
Accession: 102911439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000001915	SRRM_C	PF15230.6	3.2e-21	1	1
ENSPEMP00000001919	SRRM_C	PF15230.6	3.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000002372	-	3680	-	ENSPEMP00000001919	552 (aa)	-	-
ENSPEMT00000002368	-	1803	XM_006970816	ENSPEMP00000001915	600 (aa)	XP_006970878	UPI00042ACABD

Gene Model

Click here to download ENSPEMG00000001823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000001823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000001823	Srrm4	86	84.321	ENSG00000139767	SRRM4	85	83.109	Homo_sapiens
ENSPEMG00000001823	Srrm4	66	53.140	ENSAPLG00000009202	SRRM4	91	55.985	Anas_platyrhynchos
ENSPEMG00000001823	Srrm4	58	86.646	ENSANAG00000020333	SRRM4	83	64.286	Aotus_nancymaae
ENSPEMG00000001823	Srrm4	86	80.880	ENSBTAG00000008676	SRRM4	86	80.422	Bos_taurus
ENSPEMG00000001823	Srrm4	86	84.130	ENSCJAG00000009146	SRRM4	85	82.917	Callithrix_jacchus
ENSPEMG00000001823	Srrm4	86	86.180	ENSCAFG00000023113	SRRM4	85	82.342	Canis_familiaris
ENSPEMG00000001823	Srrm4	57	84.543	ENSCAFG00020018665	SRRM4	55	80.126	Canis_lupus_dingo
ENSPEMG00000001823	Srrm4	84	70.488	ENSCHIG00000019151	SRRM4	85	63.208	Capra_hircus
ENSPEMG00000001823	Srrm4	85	81.474	ENSTSYG00000012239	SRRM4	84	80.126	Carlito_syrichta
ENSPEMG00000001823	Srrm4	91	75.542	ENSCAPG00000008729	SRRM4	88	79.828	Cavia_aperea
ENSPEMG00000001823	Srrm4	86	82.759	ENSCPOG00000003544	SRRM4	85	81.346	Cavia_porcellus
ENSPEMG00000001823	Srrm4	86	82.983	ENSCCAG00000022479	SRRM4	85	81.766	Cebus_capucinus
ENSPEMG00000001823	Srrm4	86	83.174	ENSCATG00000036343	SRRM4	85	81.958	Cercocebus_atys
ENSPEMG00000001823	Srrm4	86	82.917	ENSCLAG00000009764	SRRM4	85	82.500	Chinchilla_lanigera
ENSPEMG00000001823	Srrm4	86	83.556	ENSCSAG00000002300	SRRM4	85	82.342	Chlorocebus_sabaeus
ENSPEMG00000001823	Srrm4	57	60.234	ENSCPBG00000012293	SRRM4	87	62.847	Chrysemys_picta_bellii
ENSPEMG00000001823	Srrm4	58	86.335	ENSCANG00000031719	SRRM4	85	81.888	Colobus_angolensis_palliatus
ENSPEMG00000001823	Srrm4	86	96.699	ENSCGRG00001000544	Srrm4	100	96.678	Cricetulus_griseus_chok1gshd
ENSPEMG00000001823	Srrm4	86	89.168	ENSCGRG00000006973	Srrm4	100	96.522	Cricetulus_griseus_crigri
ENSPEMG00000001823	Srrm4	86	80.916	ENSDNOG00000000260	SRRM4	88	78.654	Dasypus_novemcinctus
ENSPEMG00000001823	Srrm4	86	77.500	ENSDORG00000015243	Srrm4	87	77.176	Dipodomys_ordii
ENSPEMG00000001823	Srrm4	85	81.853	ENSEASG00005008759	SRRM4	87	83.877	Equus_asinus_asinus
ENSPEMG00000001823	Srrm4	85	85.135	ENSECAG00000021729	SRRM4	87	81.382	Equus_caballus
ENSPEMG00000001823	Srrm4	85	83.398	ENSFCAG00000010536	SRRM4	83	82.534	Felis_catus
ENSPEMG00000001823	Srrm4	85	78.764	ENSFDAG00000007218	SRRM4	85	80.998	Fukomys_damarensis
ENSPEMG00000001823	Srrm4	86	84.512	ENSGGOG00000005338	SRRM4	85	83.301	Gorilla_gorilla
ENSPEMG00000001823	Srrm4	86	82.659	ENSHGLG00000007830	SRRM4	86	82.342	Heterocephalus_glaber_female
ENSPEMG00000001823	Srrm4	56	80.063	ENSHGLG00100008549	SRRM4	90	77.263	Heterocephalus_glaber_male
ENSPEMG00000001823	Srrm4	85	74.255	ENSSTOG00000026642	SRRM4	83	74.262	Ictidomys_tridecemlineatus
ENSPEMG00000001823	Srrm4	84	81.237	ENSJJAG00000016448	Srrm4	81	82.809	Jaculus_jaculus
ENSPEMG00000001823	Srrm4	86	84.139	ENSLAFG00000003731	SRRM4	84	79.191	Loxodonta_africana
ENSPEMG00000001823	Srrm4	86	83.748	ENSMFAG00000041271	SRRM4	84	82.534	Macaca_fascicularis
ENSPEMG00000001823	Srrm4	84	74.370	ENSMMUG00000021230	SRRM4	76	75.316	Macaca_mulatta
ENSPEMG00000001823	Srrm4	86	83.748	ENSMNEG00000044154	SRRM4	84	82.534	Macaca_nemestrina
ENSPEMG00000001823	Srrm4	86	83.748	ENSMLEG00000034455	SRRM4	85	82.534	Mandrillus_leucophaeus
ENSPEMG00000001823	Srrm4	85	60.038	ENSMGAG00000009082	SRRM4	87	61.007	Meleagris_gallopavo
ENSPEMG00000001823	Srrm4	100	96.667	ENSMAUG00000013203	Srrm4	100	96.667	Mesocricetus_auratus
ENSPEMG00000001823	Srrm4	86	82.218	ENSMICG00000012386	SRRM4	85	82.150	Microcebus_murinus
ENSPEMG00000001823	Srrm4	86	91.650	ENSMOCG00000006737	Srrm4	86	94.757	Microtus_ochrogaster
ENSPEMG00000001823	Srrm4	85	57.398	ENSMODG00000015283	SRRM4	86	54.078	Monodelphis_domestica
ENSPEMG00000001823	Srrm4	86	94.584	MGP_CAROLIEiJ_G0027638	Srrm4	85	92.070	Mus_caroli
ENSPEMG00000001823	Srrm4	86	93.992	ENSMUSG00000063919	Srrm4	85	91.489	Mus_musculus
ENSPEMG00000001823	Srrm4	86	90.329	MGP_PahariEiJ_G0024219	Srrm4	85	90.716	Mus_pahari
ENSPEMG00000001823	Srrm4	86	94.197	MGP_SPRETEiJ_G0028637	Srrm4	85	91.683	Mus_spretus
ENSPEMG00000001823	Srrm4	85	82.432	ENSMPUG00000002930	SRRM4	86	82.342	Mustela_putorius_furo
ENSPEMG00000001823	Srrm4	86	88.528	ENSNGAG00000020807	Srrm4	86	86.756	Nannospalax_galili
ENSPEMG00000001823	Srrm4	86	84.321	ENSNLEG00000000200	SRRM4	85	83.109	Nomascus_leucogenys
ENSPEMG00000001823	Srrm4	54	80.645	ENSMEUG00000010419	-	50	85.455	Notamacropus_eugenii
ENSPEMG00000001823	Srrm4	85	76.381	ENSOPRG00000016981	SRRM4	77	72.917	Ochotona_princeps
ENSPEMG00000001823	Srrm4	86	81.923	ENSODEG00000006291	SRRM4	85	81.538	Octodon_degus
ENSPEMG00000001823	Srrm4	85	83.815	ENSOCUG00000004503	SRRM4	77	82.184	Oryctolagus_cuniculus
ENSPEMG00000001823	Srrm4	86	82.027	ENSOGAG00000015431	SRRM4	85	81.574	Otolemur_garnettii
ENSPEMG00000001823	Srrm4	86	80.688	ENSOARG00000002063	SRRM4	86	80.230	Ovis_aries
ENSPEMG00000001823	Srrm4	84	83.686	ENSPPAG00000028134	SRRM4	84	82.180	Pan_paniscus
ENSPEMG00000001823	Srrm4	85	83.012	ENSPPRG00000002659	SRRM4	84	82.150	Panthera_pardus
ENSPEMG00000001823	Srrm4	63	65.230	ENSPTIG00000011414	SRRM4	62	74.763	Panthera_tigris_altaica
ENSPEMG00000001823	Srrm4	86	84.512	ENSPTRG00000005517	SRRM4	85	83.301	Pan_troglodytes
ENSPEMG00000001823	Srrm4	86	83.939	ENSPANG00000022544	SRRM4	99	82.387	Papio_anubis
ENSPEMG00000001823	Srrm4	84	76.383	ENSPCAG00000016401	SRRM4	68	71.158	Procavia_capensis
ENSPEMG00000001823	Srrm4	86	82.218	ENSPCOG00000013803	SRRM4	86	81.958	Propithecus_coquereli
ENSPEMG00000001823	Srrm4	85	81.474	ENSPVAG00000017487	SRRM4	85	83.229	Pteropus_vampyrus
ENSPEMG00000001823	Srrm4	86	94.584	ENSRNOG00000001141	Srrm4	86	92.070	Rattus_norvegicus
ENSPEMG00000001823	Srrm4	58	84.783	ENSRBIG00000040107	SRRM4	56	80.625	Rhinopithecus_bieti
ENSPEMG00000001823	Srrm4	58	86.025	ENSRROG00000035868	SRRM4	56	81.875	Rhinopithecus_roxellana
ENSPEMG00000001823	Srrm4	86	76.673	ENSSBOG00000035310	SRRM4	85	75.432	Saimiri_boliviensis_boliviensis
ENSPEMG00000001823	Srrm4	85	65.859	ENSSHAG00000017330	SRRM4	87	62.651	Sarcophilus_harrisii
ENSPEMG00000001823	Srrm4	67	77.673	ENSSARG00000012647	SRRM4	66	77.532	Sorex_araneus
ENSPEMG00000001823	Srrm4	86	84.512	ENSSSCG00000009845	SRRM4	85	80.614	Sus_scrofa
ENSPEMG00000001823	Srrm4	64	56.186	ENSTGUG00000009228	SRRM4	91	58.679	Taeniopygia_guttata
ENSPEMG00000001823	Srrm4	77	88.276	ENSVPAG00000007937	SRRM4	71	87.023	Vicugna_pacos
ENSPEMG00000001823	Srrm4	55	52.381	ENSXETG00000019934	SRRM4	97	51.032	Xenopus_tropicalis