EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000001854 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: -
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 81048 bases
Position: chrKI615621.1:888898-969945
Accession: 102917792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000002029	ResIII	PF04851.15	3.4e-08	1	1
ENSPEMP00000002019	ResIII	PF04851.15	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000002485	-	2733	XM_016005257	ENSPEMP00000002029	910 (aa)	XP_015860743	-
ENSPEMT00000002475	-	2748	-	ENSPEMP00000002019	915 (aa)	-	-
ENSPEMT00000002508	-	219	-	ENSPEMP00000002043	72 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000001854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000001854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000001854	Smarcad1	50	33.678	ENSPEMG00000021081	-	52	33.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000001854	Smarcad1	100	79.045	ENSG00000163104	SMARCAD1	90	96.825	Homo_sapiens
ENSPEMG00000001854	Smarcad1	100	54.494	ENSAPOG00000011446	smarcad1a	97	53.498	Acanthochromis_polyacanthus
ENSPEMG00000001854	Smarcad1	100	78.307	ENSAMEG00000005844	SMARCAD1	100	77.519	Ailuropoda_melanoleuca
ENSPEMG00000001854	Smarcad1	75	51.753	ENSACIG00000018326	smarcad1a	100	52.308	Amphilophus_citrinellus
ENSPEMG00000001854	Smarcad1	100	54.266	ENSAOCG00000019762	smarcad1a	100	53.361	Amphiprion_ocellaris
ENSPEMG00000001854	Smarcad1	100	54.494	ENSAPEG00000003889	smarcad1a	96	54.494	Amphiprion_percula
ENSPEMG00000001854	Smarcad1	84	55.603	ENSATEG00000015608	smarcad1a	90	55.603	Anabas_testudineus
ENSPEMG00000001854	Smarcad1	90	63.407	ENSAPLG00000004630	SMARCAD1	92	65.062	Anas_platyrhynchos
ENSPEMG00000001854	Smarcad1	100	60.938	ENSACAG00000013554	SMARCAD1	100	60.585	Anolis_carolinensis
ENSPEMG00000001854	Smarcad1	100	78.696	ENSANAG00000020488	SMARCAD1	98	81.614	Aotus_nancymaae
ENSPEMG00000001854	Smarcad1	97	54.816	ENSACLG00000017063	smarcad1a	98	53.444	Astatotilapia_calliptera
ENSPEMG00000001854	Smarcad1	81	50.540	ENSAMXG00000019130	smarcad1b	83	53.238	Astyanax_mexicanus
ENSPEMG00000001854	Smarcad1	70	54.008	ENSAMXG00000015470	smarcad1a	98	54.008	Astyanax_mexicanus
ENSPEMG00000001854	Smarcad1	100	77.843	ENSBTAG00000017061	SMARCAD1	100	77.648	Bos_taurus
ENSPEMG00000001854	Smarcad1	59	37.255	WBGene00010845	M03C11.8	82	33.131	Caenorhabditis_elegans
ENSPEMG00000001854	Smarcad1	100	79.122	ENSCJAG00000006778	SMARCAD1	100	78.829	Callithrix_jacchus
ENSPEMG00000001854	Smarcad1	100	78.113	ENSCAFG00000010026	SMARCAD1	100	77.326	Canis_familiaris
ENSPEMG00000001854	Smarcad1	88	82.353	ENSCAFG00020003994	SMARCAD1	99	82.014	Canis_lupus_dingo
ENSPEMG00000001854	Smarcad1	100	77.918	ENSCHIG00000012905	SMARCAD1	100	77.724	Capra_hircus
ENSPEMG00000001854	Smarcad1	100	79.260	ENSTSYG00000002706	SMARCAD1	100	79.065	Carlito_syrichta
ENSPEMG00000001854	Smarcad1	88	64.600	ENSCAPG00000016744	SMARCAD1	91	66.276	Cavia_aperea
ENSPEMG00000001854	Smarcad1	100	77.616	ENSCPOG00000011398	SMARCAD1	100	77.132	Cavia_porcellus
ENSPEMG00000001854	Smarcad1	100	78.947	ENSCCAG00000022264	SMARCAD1	100	83.389	Cebus_capucinus
ENSPEMG00000001854	Smarcad1	100	79.142	ENSCATG00000035663	SMARCAD1	100	82.002	Cercocebus_atys
ENSPEMG00000001854	Smarcad1	83	81.905	ENSCSAG00000004186	SMARCAD1	100	81.548	Chlorocebus_sabaeus
ENSPEMG00000001854	Smarcad1	100	62.186	ENSCPBG00000013203	SMARCAD1	100	62.863	Chrysemys_picta_bellii
ENSPEMG00000001854	Smarcad1	64	41.742	ENSCING00000001688	-	99	42.042	Ciona_intestinalis
ENSPEMG00000001854	Smarcad1	100	79.045	ENSCANG00000003556	SMARCAD1	100	83.221	Colobus_angolensis_palliatus
ENSPEMG00000001854	Smarcad1	100	81.525	ENSCGRG00001015056	Smarcad1	100	81.525	Cricetulus_griseus_chok1gshd
ENSPEMG00000001854	Smarcad1	100	81.525	ENSCGRG00000014087	Smarcad1	100	81.525	Cricetulus_griseus_crigri
ENSPEMG00000001854	Smarcad1	99	52.381	ENSCSEG00000014419	-	100	41.583	Cynoglossus_semilaevis
ENSPEMG00000001854	Smarcad1	100	54.891	ENSCSEG00000017903	smarcad1a	90	44.813	Cynoglossus_semilaevis
ENSPEMG00000001854	Smarcad1	75	51.567	ENSDARG00000073721	smarcad1b	80	52.214	Danio_rerio
ENSPEMG00000001854	Smarcad1	100	43.365	ENSDARG00000014041	smarcad1a	100	44.509	Danio_rerio
ENSPEMG00000001854	Smarcad1	100	77.680	ENSDNOG00000000806	-	100	78.363	Dasypus_novemcinctus
ENSPEMG00000001854	Smarcad1	100	76.511	ENSDORG00000012331	Smarcad1	100	75.922	Dipodomys_ordii
ENSPEMG00000001854	Smarcad1	63	39.070	FBgn0032157	Etl1	80	38.848	Drosophila_melanogaster
ENSPEMG00000001854	Smarcad1	62	38.957	ENSEBUG00000003969	smarcad1a	96	39.580	Eptatretus_burgeri
ENSPEMG00000001854	Smarcad1	100	78.307	ENSEASG00005012382	SMARCAD1	100	77.432	Equus_asinus_asinus
ENSPEMG00000001854	Smarcad1	100	78.307	ENSECAG00000011562	SMARCAD1	100	77.432	Equus_caballus
ENSPEMG00000001854	Smarcad1	80	49.757	ENSELUG00000019154	smarcad1b	77	52.111	Esox_lucius
ENSPEMG00000001854	Smarcad1	100	45.739	ENSELUG00000018535	smarcad1a	100	45.222	Esox_lucius
ENSPEMG00000001854	Smarcad1	100	77.897	ENSFCAG00000003958	SMARCAD1	100	82.886	Felis_catus
ENSPEMG00000001854	Smarcad1	100	57.977	ENSFALG00000006089	SMARCAD1	100	57.879	Ficedula_albicollis
ENSPEMG00000001854	Smarcad1	100	78.146	ENSFDAG00000017027	SMARCAD1	100	77.648	Fukomys_damarensis
ENSPEMG00000001854	Smarcad1	94	56.000	ENSFHEG00000012778	smarcad1a	86	55.636	Fundulus_heteroclitus
ENSPEMG00000001854	Smarcad1	85	50.519	ENSGMOG00000018995	smarcad1a	97	50.289	Gadus_morhua
ENSPEMG00000001854	Smarcad1	88	59.613	ENSGALG00000037339	SMARCAD1	99	58.589	Gallus_gallus
ENSPEMG00000001854	Smarcad1	89	57.595	ENSGAFG00000013498	smarcad1a	60	57.595	Gambusia_affinis
ENSPEMG00000001854	Smarcad1	87	51.027	ENSGACG00000007327	smarcad1a	99	51.256	Gasterosteus_aculeatus
ENSPEMG00000001854	Smarcad1	100	61.859	ENSGAGG00000008582	SMARCAD1	100	62.196	Gopherus_agassizii
ENSPEMG00000001854	Smarcad1	100	79.142	ENSGGOG00000023001	SMARCAD1	100	78.850	Gorilla_gorilla
ENSPEMG00000001854	Smarcad1	97	54.533	ENSHBUG00000011042	smarcad1a	98	53.232	Haplochromis_burtoni
ENSPEMG00000001854	Smarcad1	100	78.523	ENSHGLG00000005070	SMARCAD1	100	78.025	Heterocephalus_glaber_female
ENSPEMG00000001854	Smarcad1	100	78.523	ENSHGLG00100006812	SMARCAD1	100	78.025	Heterocephalus_glaber_male
ENSPEMG00000001854	Smarcad1	63	55.763	ENSHCOG00000007848	smarcad1a	64	52.468	Hippocampus_comes
ENSPEMG00000001854	Smarcad1	90	56.149	ENSIPUG00000000242	smarcad1a	94	52.479	Ictalurus_punctatus
ENSPEMG00000001854	Smarcad1	82	50.362	ENSIPUG00000022817	smarcad1b	82	53.553	Ictalurus_punctatus
ENSPEMG00000001854	Smarcad1	100	78.870	ENSSTOG00000001227	SMARCAD1	100	78.578	Ictidomys_tridecemlineatus
ENSPEMG00000001854	Smarcad1	100	78.850	ENSJJAG00000022342	Smarcad1	100	78.558	Jaculus_jaculus
ENSPEMG00000001854	Smarcad1	93	55.038	ENSKMAG00000021351	smarcad1a	97	52.712	Kryptolebias_marmoratus
ENSPEMG00000001854	Smarcad1	97	55.683	ENSLBEG00000008088	smarcad1a	94	55.683	Labrus_bergylta
ENSPEMG00000001854	Smarcad1	100	48.657	ENSLOCG00000012909	smarcad1a	100	49.060	Lepisosteus_oculatus
ENSPEMG00000001854	Smarcad1	100	76.608	ENSLAFG00000000040	SMARCAD1	100	76.316	Loxodonta_africana
ENSPEMG00000001854	Smarcad1	100	78.947	ENSMFAG00000042606	SMARCAD1	100	81.890	Macaca_fascicularis
ENSPEMG00000001854	Smarcad1	88	82.227	ENSMMUG00000022242	SMARCAD1	100	81.890	Macaca_mulatta
ENSPEMG00000001854	Smarcad1	100	78.850	ENSMNEG00000038117	SMARCAD1	100	83.054	Macaca_nemestrina
ENSPEMG00000001854	Smarcad1	100	79.045	ENSMLEG00000038333	SMARCAD1	100	83.221	Mandrillus_leucophaeus
ENSPEMG00000001854	Smarcad1	98	55.278	ENSMAMG00000000933	smarcad1a	96	55.292	Mastacembelus_armatus
ENSPEMG00000001854	Smarcad1	100	44.929	ENSMZEG00005005203	smarcad1a	100	44.972	Maylandia_zebra
ENSPEMG00000001854	Smarcad1	90	57.221	ENSMGAG00000005577	SMARCAD1	92	58.072	Meleagris_gallopavo
ENSPEMG00000001854	Smarcad1	100	81.232	ENSMAUG00000008417	Smarcad1	100	81.232	Mesocricetus_auratus
ENSPEMG00000001854	Smarcad1	100	77.886	ENSMICG00000009746	SMARCAD1	100	78.037	Microcebus_murinus
ENSPEMG00000001854	Smarcad1	100	81.152	ENSMOCG00000017142	Smarcad1	100	81.232	Microtus_ochrogaster
ENSPEMG00000001854	Smarcad1	76	52.185	ENSMMOG00000000275	smarcad1a	99	52.185	Mola_mola
ENSPEMG00000001854	Smarcad1	100	68.406	ENSMODG00000019268	SMARCAD1	100	68.406	Monodelphis_domestica
ENSPEMG00000001854	Smarcad1	91	90.625	MGP_CAROLIEiJ_G0028458	-	72	90.625	Mus_caroli
ENSPEMG00000001854	Smarcad1	100	79.746	ENSMUSG00000029920	Smarcad1	100	79.843	Mus_musculus
ENSPEMG00000001854	Smarcad1	100	80.333	MGP_PahariEiJ_G0022198	Smarcad1	100	80.333	Mus_pahari
ENSPEMG00000001854	Smarcad1	100	79.843	MGP_SPRETEiJ_G0029462	Smarcad1	100	79.941	Mus_spretus
ENSPEMG00000001854	Smarcad1	100	78.113	ENSMPUG00000002111	SMARCAD1	100	77.616	Mustela_putorius_furo
ENSPEMG00000001854	Smarcad1	100	76.654	ENSMLUG00000000425	SMARCAD1	100	76.654	Myotis_lucifugus
ENSPEMG00000001854	Smarcad1	100	79.122	ENSNGAG00000000810	Smarcad1	100	79.122	Nannospalax_galili
ENSPEMG00000001854	Smarcad1	66	55.244	ENSNBRG00000012749	smarcad1a	84	53.315	Neolamprologus_brichardi
ENSPEMG00000001854	Smarcad1	100	79.142	ENSNLEG00000014225	SMARCAD1	100	83.221	Nomascus_leucogenys
ENSPEMG00000001854	Smarcad1	100	77.940	ENSODEG00000004334	SMARCAD1	100	77.843	Octodon_degus
ENSPEMG00000001854	Smarcad1	100	46.965	ENSONIG00000015059	smarcad1a	100	47.705	Oreochromis_niloticus
ENSPEMG00000001854	Smarcad1	81	71.256	ENSOANG00000013764	SMARCAD1	100	71.256	Ornithorhynchus_anatinus
ENSPEMG00000001854	Smarcad1	100	79.220	ENSOCUG00000017283	SMARCAD1	100	78.927	Oryctolagus_cuniculus
ENSPEMG00000001854	Smarcad1	65	56.712	ENSORLG00000004869	smarcad1a	98	53.232	Oryzias_latipes
ENSPEMG00000001854	Smarcad1	65	57.014	ENSORLG00020020569	smarcad1a	69	53.434	Oryzias_latipes_hni
ENSPEMG00000001854	Smarcad1	65	56.863	ENSORLG00015009045	smarcad1a	69	53.425	Oryzias_latipes_hsok
ENSPEMG00000001854	Smarcad1	96	57.078	ENSOMEG00000023032	smarcad1a	95	53.709	Oryzias_melastigma
ENSPEMG00000001854	Smarcad1	100	78.502	ENSOGAG00000011444	SMARCAD1	100	78.502	Otolemur_garnettii
ENSPEMG00000001854	Smarcad1	100	78.016	ENSOARG00000017851	SMARCAD1	100	77.326	Ovis_aries
ENSPEMG00000001854	Smarcad1	100	79.045	ENSPPAG00000035715	SMARCAD1	100	78.752	Pan_paniscus
ENSPEMG00000001854	Smarcad1	100	77.897	ENSPPRG00000024756	SMARCAD1	100	82.886	Panthera_pardus
ENSPEMG00000001854	Smarcad1	100	77.745	ENSPTIG00000017868	SMARCAD1	100	76.960	Panthera_tigris_altaica
ENSPEMG00000001854	Smarcad1	100	79.142	ENSPTRG00000023126	SMARCAD1	100	83.221	Pan_troglodytes
ENSPEMG00000001854	Smarcad1	100	77.843	ENSPANG00000019757	SMARCAD1	100	77.648	Papio_anubis
ENSPEMG00000001854	Smarcad1	100	61.219	ENSPSIG00000010255	SMARCAD1	100	61.315	Pelodiscus_sinensis
ENSPEMG00000001854	Smarcad1	63	57.232	ENSPMGG00000010735	smarcad1a	95	55.769	Periophthalmus_magnuspinnatus
ENSPEMG00000001854	Smarcad1	99	42.775	ENSPMAG00000003516	smarcad1a	99	42.885	Petromyzon_marinus
ENSPEMG00000001854	Smarcad1	75	77.177	ENSPCIG00000008137	SMARCAD1	98	76.511	Phascolarctos_cinereus
ENSPEMG00000001854	Smarcad1	94	57.656	ENSPFOG00000019116	smarcad1a	88	55.267	Poecilia_formosa
ENSPEMG00000001854	Smarcad1	94	57.656	ENSPLAG00000000108	smarcad1a	88	55.267	Poecilia_latipinna
ENSPEMG00000001854	Smarcad1	94	57.656	ENSPMEG00000009155	smarcad1a	88	55.267	Poecilia_mexicana
ENSPEMG00000001854	Smarcad1	100	54.208	ENSPREG00000018185	smarcad1a	100	53.022	Poecilia_reticulata
ENSPEMG00000001854	Smarcad1	100	78.578	ENSPPYG00000014935	SMARCAD1	100	78.286	Pongo_abelii
ENSPEMG00000001854	Smarcad1	88	95.312	ENSPCOG00000020478	SMARCAD1	91	95.312	Propithecus_coquereli
ENSPEMG00000001854	Smarcad1	100	76.093	ENSPVAG00000001760	SMARCAD1	100	76.676	Pteropus_vampyrus
ENSPEMG00000001854	Smarcad1	68	54.136	ENSPNYG00000010087	smarcad1a	85	52.750	Pundamilia_nyererei
ENSPEMG00000001854	Smarcad1	100	45.058	ENSPNAG00000001663	smarcad1a	100	44.737	Pygocentrus_nattereri
ENSPEMG00000001854	Smarcad1	77	51.960	ENSPNAG00000010099	smarcad1b	84	52.207	Pygocentrus_nattereri
ENSPEMG00000001854	Smarcad1	100	80.859	ENSRNOG00000006391	Smarcad1	100	80.859	Rattus_norvegicus
ENSPEMG00000001854	Smarcad1	100	79.240	ENSRBIG00000041989	SMARCAD1	100	78.947	Rhinopithecus_bieti
ENSPEMG00000001854	Smarcad1	100	79.240	ENSRROG00000035309	SMARCAD1	100	78.947	Rhinopithecus_roxellana
ENSPEMG00000001854	Smarcad1	100	78.947	ENSSBOG00000032114	SMARCAD1	100	83.389	Saimiri_boliviensis_boliviensis
ENSPEMG00000001854	Smarcad1	100	69.052	ENSSHAG00000001279	SMARCAD1	100	69.052	Sarcophilus_harrisii
ENSPEMG00000001854	Smarcad1	75	51.245	ENSSFOG00015020909	smarcad1a	99	51.245	Scleropages_formosus
ENSPEMG00000001854	Smarcad1	86	48.508	ENSSFOG00015016814	smarcad1b	88	49.282	Scleropages_formosus
ENSPEMG00000001854	Smarcad1	97	56.241	ENSSMAG00000001326	smarcad1a	98	54.434	Scophthalmus_maximus
ENSPEMG00000001854	Smarcad1	68	54.741	ENSSDUG00000022338	smarcad1a	86	53.571	Seriola_dumerili
ENSPEMG00000001854	Smarcad1	96	54.598	ENSSLDG00000024986	smarcad1a	98	52.885	Seriola_lalandi_dorsalis
ENSPEMG00000001854	Smarcad1	58	71.859	ENSSPUG00000004633	SMARCAD1	100	71.859	Sphenodon_punctatus
ENSPEMG00000001854	Smarcad1	96	55.237	ENSSPAG00000001970	smarcad1a	99	52.681	Stegastes_partitus
ENSPEMG00000001854	Smarcad1	100	78.696	ENSSSCG00000009193	SMARCAD1	100	81.451	Sus_scrofa
ENSPEMG00000001854	Smarcad1	75	67.885	ENSTGUG00000003127	SMARCAD1	97	68.146	Taeniopygia_guttata
ENSPEMG00000001854	Smarcad1	86	49.320	ENSTNIG00000017585	smarcad1a	99	50.058	Tetraodon_nigroviridis
ENSPEMG00000001854	Smarcad1	94	89.442	ENSTBEG00000002789	SMARCAD1	90	89.442	Tupaia_belangeri
ENSPEMG00000001854	Smarcad1	98	76.564	ENSTTRG00000000226	SMARCAD1	100	75.865	Tursiops_truncatus
ENSPEMG00000001854	Smarcad1	100	78.307	ENSUAMG00000022262	SMARCAD1	100	77.519	Ursus_americanus
ENSPEMG00000001854	Smarcad1	100	78.286	ENSUMAG00000004549	SMARCAD1	100	77.498	Ursus_maritimus
ENSPEMG00000001854	Smarcad1	100	78.307	ENSVVUG00000007271	SMARCAD1	100	81.332	Vulpes_vulpes
ENSPEMG00000001854	Smarcad1	86	61.379	ENSXETG00000019214	smarcad1	100	60.661	Xenopus_tropicalis
ENSPEMG00000001854	Smarcad1	98	44.547	ENSXCOG00000005232	smarcad1a	84	55.117	Xiphophorus_couchianus
ENSPEMG00000001854	Smarcad1	98	55.539	ENSXMAG00000015350	smarcad1a	90	53.288	Xiphophorus_maculatus