EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000003395 (Gene tree)
Gene ID: 102925816
Gene Symbol: Ddx28
Alias: -
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 1629 bases
Position: chrKI615625.1:1296688-1298316
Accession: 102925816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000002747	DEAD	PF00270.29	2.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000004189	-	1629	XM_006986835	ENSPEMP00000002747	542 (aa)	XP_006986897	-

Gene Model

Click here to download ENSPEMG00000003395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000003395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000003395	Ddx28	74	31.358	ENSPEMG00000023986	Ddx43	66	31.111
ENSPEMG00000003395	Ddx28	67	38.710	ENSPEMG00000016389	Ddx1	53	38.710
ENSPEMG00000003395	Ddx28	72	34.684	ENSPEMG00000009746	Ddx47	78	34.684
ENSPEMG00000003395	Ddx28	66	32.320	ENSPEMG00000021115	Ddx17	51	32.320
ENSPEMG00000003395	Ddx28	69	31.759	ENSPEMG00000010715	Ddx59	58	30.964
ENSPEMG00000003395	Ddx28	67	31.781	ENSPEMG00000016502	Ddx5	55	32.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000003395	Ddx28	99	80.185	ENSG00000182810	DDX28	99	80.185	Homo_sapiens
ENSPEMG00000003395	Ddx28	94	47.977	ENSAPOG00000000991	ddx28	89	47.977	Acanthochromis_polyacanthus
ENSPEMG00000003395	Ddx28	99	80.037	ENSAMEG00000019426	DDX28	99	79.852	Ailuropoda_melanoleuca
ENSPEMG00000003395	Ddx28	98	46.863	ENSACIG00000021615	ddx28	94	46.863	Amphilophus_citrinellus
ENSPEMG00000003395	Ddx28	94	48.170	ENSAOCG00000004610	ddx28	89	48.170	Amphiprion_ocellaris
ENSPEMG00000003395	Ddx28	94	48.170	ENSAPEG00000002143	ddx28	89	48.170	Amphiprion_percula
ENSPEMG00000003395	Ddx28	96	48.015	ENSATEG00000018691	ddx28	92	48.015	Anabas_testudineus
ENSPEMG00000003395	Ddx28	94	53.502	ENSACAG00000009755	DDX28	94	54.369	Anolis_carolinensis
ENSPEMG00000003395	Ddx28	93	46.899	ENSACLG00000012984	ddx28	89	46.899	Astatotilapia_calliptera
ENSPEMG00000003395	Ddx28	94	47.834	ENSAMXG00000005878	ddx28	91	47.834	Astyanax_mexicanus
ENSPEMG00000003395	Ddx28	96	81.071	ENSBTAG00000004290	DDX28	99	80.407	Bos_taurus
ENSPEMG00000003395	Ddx28	98	80.414	ENSCAFG00000020327	DDX28	99	80.226	Canis_familiaris
ENSPEMG00000003395	Ddx28	98	80.414	ENSCAFG00020019785	DDX28	99	80.226	Canis_lupus_dingo
ENSPEMG00000003395	Ddx28	96	80.998	ENSCHIG00000009658	DDX28	99	80.000	Capra_hircus
ENSPEMG00000003395	Ddx28	98	79.057	ENSCPOG00000013746	DDX28	98	79.057	Cavia_porcellus
ENSPEMG00000003395	Ddx28	99	78.373	ENSCSAG00000018472	DDX28	99	78.373	Chlorocebus_sabaeus
ENSPEMG00000003395	Ddx28	87	59.197	ENSCPBG00000012105	DDX28	85	58.430	Chrysemys_picta_bellii
ENSPEMG00000003395	Ddx28	68	39.842	ENSCSAVG00000006341	-	94	40.107	Ciona_savignyi
ENSPEMG00000003395	Ddx28	97	91.635	ENSCGRG00001024412	Ddx28	100	92.205	Cricetulus_griseus_chok1gshd
ENSPEMG00000003395	Ddx28	97	48.030	ENSCSEG00000011651	ddx28	92	48.030	Cynoglossus_semilaevis
ENSPEMG00000003395	Ddx28	94	49.903	ENSCVAG00000004044	ddx28	90	49.903	Cyprinodon_variegatus
ENSPEMG00000003395	Ddx28	93	49.027	ENSDARG00000060411	ddx28	90	49.027	Danio_rerio
ENSPEMG00000003395	Ddx28	68	81.622	ENSDNOG00000033593	DDX28	99	81.622	Dasypus_novemcinctus
ENSPEMG00000003395	Ddx28	99	79.482	ENSDORG00000028868	Ddx28	99	79.482	Dipodomys_ordii
ENSPEMG00000003395	Ddx28	88	33.196	FBgn0086130	Dbp21E2	87	32.992	Drosophila_melanogaster
ENSPEMG00000003395	Ddx28	100	78.413	ENSETEG00000001062	-	100	78.413	Echinops_telfairi
ENSPEMG00000003395	Ddx28	80	44.271	ENSEBUG00000004791	ddx28	66	44.560	Eptatretus_burgeri
ENSPEMG00000003395	Ddx28	100	82.841	ENSEASG00005020387	DDX28	100	82.841	Equus_asinus_asinus
ENSPEMG00000003395	Ddx28	100	82.841	ENSECAG00000006451	DDX28	99	82.994	Equus_caballus
ENSPEMG00000003395	Ddx28	77	72.143	ENSEEUG00000005017	DDX28	98	72.143	Erinaceus_europaeus
ENSPEMG00000003395	Ddx28	93	49.130	ENSELUG00000005302	ddx28	96	49.130	Esox_lucius
ENSPEMG00000003395	Ddx28	99	80.961	ENSFCAG00000012858	DDX28	99	80.961	Felis_catus
ENSPEMG00000003395	Ddx28	94	49.709	ENSFHEG00000012573	ddx28	91	49.709	Fundulus_heteroclitus
ENSPEMG00000003395	Ddx28	93	46.887	ENSGMOG00000017045	ddx28	95	47.184	Gadus_morhua
ENSPEMG00000003395	Ddx28	94	49.811	ENSGALG00000048700	DDX28	89	50.951	Gallus_gallus
ENSPEMG00000003395	Ddx28	94	48.062	ENSGAFG00000009249	ddx28	90	48.062	Gambusia_affinis
ENSPEMG00000003395	Ddx28	93	48.638	ENSGACG00000016367	ddx28	94	48.638	Gasterosteus_aculeatus
ENSPEMG00000003395	Ddx28	79	58.430	ENSGAGG00000004565	DDX28	93	58.430	Gopherus_agassizii
ENSPEMG00000003395	Ddx28	99	80.556	ENSGGOG00000001220	DDX28	99	80.556	Gorilla_gorilla
ENSPEMG00000003395	Ddx28	93	48.649	ENSHBUG00000001016	ddx28	90	48.649	Haplochromis_burtoni
ENSPEMG00000003395	Ddx28	94	45.560	ENSHCOG00000017590	ddx28	92	45.174	Hippocampus_comes
ENSPEMG00000003395	Ddx28	94	48.269	ENSIPUG00000017350	Ddx28	90	48.077	Ictalurus_punctatus
ENSPEMG00000003395	Ddx28	100	79.705	ENSSTOG00000002064	DDX28	100	79.705	Ictidomys_tridecemlineatus
ENSPEMG00000003395	Ddx28	100	79.779	ENSJJAG00000012460	-	100	79.779	Jaculus_jaculus
ENSPEMG00000003395	Ddx28	94	47.399	ENSKMAG00000018183	ddx28	90	47.399	Kryptolebias_marmoratus
ENSPEMG00000003395	Ddx28	94	47.868	ENSLBEG00000006072	ddx28	90	47.868	Labrus_bergylta
ENSPEMG00000003395	Ddx28	93	54.331	ENSLACG00000005578	DDX28	87	54.331	Latimeria_chalumnae
ENSPEMG00000003395	Ddx28	96	51.692	ENSLOCG00000017604	ddx28	93	51.692	Lepisosteus_oculatus
ENSPEMG00000003395	Ddx28	99	80.961	ENSLAFG00000031239	DDX28	99	80.961	Loxodonta_africana
ENSPEMG00000003395	Ddx28	99	78.373	ENSMMUG00000010836	DDX28	99	78.373	Macaca_mulatta
ENSPEMG00000003395	Ddx28	93	48.362	ENSMAMG00000020220	ddx28	90	48.362	Mastacembelus_armatus
ENSPEMG00000003395	Ddx28	93	48.837	ENSMZEG00005009292	ddx28	90	48.837	Maylandia_zebra
ENSPEMG00000003395	Ddx28	96	68.893	ENSMICG00000012346	-	99	67.712	Microcebus_murinus
ENSPEMG00000003395	Ddx28	100	91.144	ENSMOCG00000009815	Ddx28	100	91.144	Microtus_ochrogaster
ENSPEMG00000003395	Ddx28	95	48.555	ENSMMOG00000000270	ddx28	92	48.555	Mola_mola
ENSPEMG00000003395	Ddx28	96	69.942	ENSMODG00000005303	DDX28	98	68.889	Monodelphis_domestica
ENSPEMG00000003395	Ddx28	94	48.177	ENSMALG00000008864	ddx28	90	47.409	Monopterus_albus
ENSPEMG00000003395	Ddx28	100	87.638	MGP_CAROLIEiJ_G0031510	Ddx28	100	87.638	Mus_caroli
ENSPEMG00000003395	Ddx28	100	87.638	ENSMUSG00000045538	Ddx28	100	87.638	Mus_musculus
ENSPEMG00000003395	Ddx28	100	88.192	MGP_PahariEiJ_G0023110	Ddx28	100	88.192	Mus_pahari
ENSPEMG00000003395	Ddx28	100	87.638	MGP_SPRETEiJ_G0032628	Ddx28	100	87.638	Mus_spretus
ENSPEMG00000003395	Ddx28	75	80.247	ENSMPUG00000006915	DDX28	100	80.247	Mustela_putorius_furo
ENSPEMG00000003395	Ddx28	98	78.879	ENSMLUG00000005899	DDX28	98	78.879	Myotis_lucifugus
ENSPEMG00000003395	Ddx28	96	85.249	ENSNGAG00000015762	Ddx28	99	84.259	Nannospalax_galili
ENSPEMG00000003395	Ddx28	93	48.444	ENSNBRG00000001337	ddx28	91	48.444	Neolamprologus_brichardi
ENSPEMG00000003395	Ddx28	93	48.643	ENSONIG00000020597	ddx28	90	48.643	Oreochromis_niloticus
ENSPEMG00000003395	Ddx28	51	64.260	ENSOANG00000003551	-	96	64.260	Ornithorhynchus_anatinus
ENSPEMG00000003395	Ddx28	100	78.598	ENSOCUG00000023074	DDX28	100	78.598	Oryctolagus_cuniculus
ENSPEMG00000003395	Ddx28	93	48.438	ENSORLG00000011968	ddx28	90	48.438	Oryzias_latipes
ENSPEMG00000003395	Ddx28	93	48.242	ENSORLG00020001951	ddx28	91	48.242	Oryzias_latipes_hni
ENSPEMG00000003395	Ddx28	93	47.656	ENSORLG00015023030	ddx28	91	47.656	Oryzias_latipes_hsok
ENSPEMG00000003395	Ddx28	94	47.481	ENSOMEG00000012445	ddx28	90	47.481	Oryzias_melastigma
ENSPEMG00000003395	Ddx28	97	80.529	ENSOGAG00000016895	DDX28	99	79.889	Otolemur_garnettii
ENSPEMG00000003395	Ddx28	82	77.578	ENSOARG00000003313	DDX28	99	77.578	Ovis_aries
ENSPEMG00000003395	Ddx28	99	76.667	ENSPPAG00000036971	DDX28	99	76.667	Pan_paniscus
ENSPEMG00000003395	Ddx28	99	82.255	ENSPPRG00000018322	DDX28	99	82.255	Panthera_pardus
ENSPEMG00000003395	Ddx28	99	78.743	ENSPTIG00000006444	DDX28	99	78.743	Panthera_tigris_altaica
ENSPEMG00000003395	Ddx28	99	80.185	ENSPTRG00000008258	DDX28	99	80.185	Pan_troglodytes
ENSPEMG00000003395	Ddx28	93	50.000	ENSPKIG00000021200	ddx28	93	49.806	Paramormyrops_kingsleyae
ENSPEMG00000003395	Ddx28	55	61.074	ENSPSIG00000001127	DDX28	94	62.021	Pelodiscus_sinensis
ENSPEMG00000003395	Ddx28	92	44.922	ENSPMGG00000007908	ddx28	88	44.727	Periophthalmus_magnuspinnatus
ENSPEMG00000003395	Ddx28	53	46.875	ENSPMAG00000006983	DDX28	95	46.875	Petromyzon_marinus
ENSPEMG00000003395	Ddx28	94	48.263	ENSPFOG00000020952	ddx28	89	48.263	Poecilia_formosa
ENSPEMG00000003395	Ddx28	94	48.263	ENSPFOG00000020838	DDX28	90	48.456	Poecilia_formosa
ENSPEMG00000003395	Ddx28	94	48.456	ENSPLAG00000016292	ddx28	89	48.456	Poecilia_latipinna
ENSPEMG00000003395	Ddx28	94	48.263	ENSPMEG00000011311	ddx28	88	48.263	Poecilia_mexicana
ENSPEMG00000003395	Ddx28	94	48.249	ENSPREG00000002899	ddx28	88	48.249	Poecilia_reticulata
ENSPEMG00000003395	Ddx28	99	80.185	ENSPPYG00000007481	DDX28	100	80.185	Pongo_abelii
ENSPEMG00000003395	Ddx28	100	82.873	ENSPCOG00000024632	DDX28	100	82.873	Propithecus_coquereli
ENSPEMG00000003395	Ddx28	93	48.842	ENSPNYG00000018804	ddx28	90	48.842	Pundamilia_nyererei
ENSPEMG00000003395	Ddx28	93	48.846	ENSPNAG00000014597	ddx28	94	48.654	Pygocentrus_nattereri
ENSPEMG00000003395	Ddx28	99	88.725	ENSRNOG00000019817	Ddx28	99	88.725	Rattus_norvegicus
ENSPEMG00000003395	Ddx28	93	49.042	ENSSFOG00015010181	ddx28	92	48.851	Scleropages_formosus
ENSPEMG00000003395	Ddx28	93	48.450	ENSSMAG00000006831	ddx28	90	50.204	Scophthalmus_maximus
ENSPEMG00000003395	Ddx28	93	47.389	ENSSDUG00000003257	ddx28	89	47.389	Seriola_dumerili
ENSPEMG00000003395	Ddx28	93	46.990	ENSSLDG00000004513	ddx28	89	46.990	Seriola_lalandi_dorsalis
ENSPEMG00000003395	Ddx28	99	78.373	ENSSARG00000014169	DDX28	99	78.373	Sorex_araneus
ENSPEMG00000003395	Ddx28	99	46.435	ENSSPAG00000000988	ddx28	95	46.435	Stegastes_partitus
ENSPEMG00000003395	Ddx28	100	81.365	ENSSSCG00000026038	DDX28	100	81.365	Sus_scrofa
ENSPEMG00000003395	Ddx28	96	47.901	ENSTRUG00000007815	ddx28	94	47.901	Takifugu_rubripes
ENSPEMG00000003395	Ddx28	94	47.937	ENSTNIG00000011352	ddx28	99	47.937	Tetraodon_nigroviridis
ENSPEMG00000003395	Ddx28	87	87.215	ENSTBEG00000017695	DDX28	82	87.215	Tupaia_belangeri
ENSPEMG00000003395	Ddx28	99	82.070	ENSUAMG00000016116	DDX28	99	82.070	Ursus_americanus
ENSPEMG00000003395	Ddx28	81	82.955	ENSUMAG00000019200	DDX28	89	82.955	Ursus_maritimus
ENSPEMG00000003395	Ddx28	81	78.360	ENSVVUG00000012876	DDX28	86	78.132	Vulpes_vulpes
ENSPEMG00000003395	Ddx28	94	50.784	ENSXETG00000005435	ddx28	99	50.295	Xenopus_tropicalis
ENSPEMG00000003395	Ddx28	94	48.654	ENSXCOG00000012364	ddx28	90	48.654	Xiphophorus_couchianus
ENSPEMG00000003395	Ddx28	93	49.023	ENSXMAG00000019603	ddx28	91	49.023	Xiphophorus_maculatus