EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPEMG00000004969 (Gene tree)
Gene ID: 102920853
Gene Symbol: -
Alias: -
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 1071 bases
Position: chrKI615550.1:1416702-1417772
Accession: 102920853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000003477	KH_1	PF00013.29	1.5e-51	1	3
ENSPEMP00000003477	KH_1	PF00013.29	1.5e-51	2	3
ENSPEMP00000003477	KH_1	PF00013.29	1.5e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000005986	-	1071	XM_006984584	ENSPEMP00000003477	356 (aa)	XP_006984646	UPI000000029F

Gene Model

Click here to download ENSPEMG00000004969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000004969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000004969	-	60	32.335	ENSPEMG00000019195	Fubp3	72	31.138
ENSPEMG00000004969	-	70	40.541	ENSPEMG00000006503	Nova1	57	40.541
ENSPEMG00000004969	-	100	100.000	ENSPEMG00000009197	-	100	100.000
ENSPEMG00000004969	-	69	34.667	ENSPEMG00000022853	Khsrp	61	34.667
ENSPEMG00000004969	-	98	53.541	ENSPEMG00000009276	Pcbp4	77	53.541
ENSPEMG00000004969	-	99	66.301	ENSPEMG00000000587	Pcbp3	91	66.301
ENSPEMG00000004969	-	96	75.942	ENSPEMG00000002413	-	100	75.942
ENSPEMG00000004969	-	100	81.744	ENSPEMG00000013236	Pcbp2	100	81.744