EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000005321 (Gene tree)
Gene ID: 102904712
Gene Symbol: Patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 19207 bases
Position: chrKI615344.1:1709747-1728953
Accession: 102904712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000003636	zf-C2H2	PF00096.26	2.2e-26	1	5
ENSPEMP00000003636	zf-C2H2	PF00096.26	2.2e-26	2	5
ENSPEMP00000003636	zf-C2H2	PF00096.26	2.2e-26	3	5
ENSPEMP00000003636	zf-C2H2	PF00096.26	2.2e-26	4	5
ENSPEMP00000003636	zf-C2H2	PF00096.26	2.2e-26	5	5
ENSPEMP00000003640	zf-C2H2	PF00096.26	2.7e-20	1	4
ENSPEMP00000003640	zf-C2H2	PF00096.26	2.7e-20	2	4
ENSPEMP00000003640	zf-C2H2	PF00096.26	2.7e-20	3	4
ENSPEMP00000003640	zf-C2H2	PF00096.26	2.7e-20	4	4
ENSPEMP00000003630	zf-C2H2	PF00096.26	1.4e-15	1	3
ENSPEMP00000003630	zf-C2H2	PF00096.26	1.4e-15	2	3
ENSPEMP00000003630	zf-C2H2	PF00096.26	1.4e-15	3	3
ENSPEMP00000003636	zf-met	PF12874.7	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000006421	-	207	-	ENSPEMP00000003657	69 (aa)	-	-
ENSPEMT00000006400	-	309	-	ENSPEMP00000003646	102 (aa)	-	UPI00001B63B0
ENSPEMT00000006386	-	3134	XM_006972911	ENSPEMP00000003640	641 (aa)	XP_006972973	UPI00042AEFF3
ENSPEMT00000006366	-	2977	XM_006972912	ENSPEMP00000003630	537 (aa)	XP_006972974	UPI00042AE7CE
ENSPEMT00000006379	-	3278	XM_006972913	ENSPEMP00000003636	687 (aa)	XP_006972975	UPI00042AE57A

Gene Model

Click here to download ENSPEMG00000005321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000005321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000005321	Patz1	52	35.659	ENSPEMG00000021937	-	77	39.560
ENSPEMG00000005321	Patz1	56	35.065	ENSPEMG00000020736	Zfp672	92	35.065
ENSPEMG00000005321	Patz1	58	30.457	ENSPEMG00000011776	-	68	38.889
ENSPEMG00000005321	Patz1	52	30.672	ENSPEMG00000014281	-	81	30.672
ENSPEMG00000005321	Patz1	53	30.303	ENSPEMG00000023329	-	77	31.667
ENSPEMG00000005321	Patz1	56	34.061	ENSPEMG00000020934	-	79	44.086
ENSPEMG00000005321	Patz1	65	46.429	ENSPEMG00000016932	Bcl6b	56	46.429
ENSPEMG00000005321	Patz1	58	35.294	ENSPEMG00000016507	Zfp26	72	41.489
ENSPEMG00000005321	Patz1	87	30.964	ENSPEMG00000011285	Gzf1	87	33.121
ENSPEMG00000005321	Patz1	53	30.435	ENSPEMG00000009428	Zfp39	58	30.435
ENSPEMG00000005321	Patz1	62	36.283	ENSPEMG00000000870	Repin1	82	36.283
ENSPEMG00000005321	Patz1	85	37.895	ENSPEMG00000016649	Zbtb14	92	38.889
ENSPEMG00000005321	Patz1	53	32.178	ENSPEMG00000000472	Zfp28	50	41.935
ENSPEMG00000005321	Patz1	53	30.303	ENSPEMG00000008173	-	76	32.692
ENSPEMG00000005321	Patz1	52	30.479	ENSPEMG00000020749	-	77	42.105
ENSPEMG00000005321	Patz1	56	30.345	ENSPEMG00000000403	-	60	44.928
ENSPEMG00000005321	Patz1	54	32.450	ENSPEMG00000000860	Zfp94	80	38.298
ENSPEMG00000005321	Patz1	53	30.736	ENSPEMG00000021548	Zfp712	86	43.678
ENSPEMG00000005321	Patz1	71	32.576	ENSPEMG00000021923	Zbtb17	63	33.813
ENSPEMG00000005321	Patz1	51	42.045	ENSPEMG00000001292	Wt1	76	42.045
ENSPEMG00000005321	Patz1	53	31.878	ENSPEMG00000007461	-	90	40.000
ENSPEMG00000005321	Patz1	58	35.333	ENSPEMG00000022834	Zfp709	78	31.679
ENSPEMG00000005321	Patz1	53	30.814	ENSPEMG00000023883	-	70	36.559
ENSPEMG00000005321	Patz1	50	31.250	ENSPEMG00000016745	Zfp319	79	31.250
ENSPEMG00000005321	Patz1	80	35.632	ENSPEMG00000003077	-	89	35.632
ENSPEMG00000005321	Patz1	53	39.024	ENSPEMG00000009113	Zfp628	65	39.024
ENSPEMG00000005321	Patz1	53	32.828	ENSPEMG00000007241	-	76	30.970
ENSPEMG00000005321	Patz1	51	38.690	ENSPEMG00000022945	-	65	44.304
ENSPEMG00000005321	Patz1	52	37.705	ENSPEMG00000014980	Zfp64	67	37.069
ENSPEMG00000005321	Patz1	69	39.815	ENSPEMG00000009212	Zbtb24	57	39.815
ENSPEMG00000005321	Patz1	50	39.326	ENSPEMG00000000548	-	71	39.326
ENSPEMG00000005321	Patz1	53	32.599	ENSPEMG00000018022	-	60	46.316
ENSPEMG00000005321	Patz1	57	30.242	ENSPEMG00000007595	-	79	35.870
ENSPEMG00000005321	Patz1	55	32.423	ENSPEMG00000010242	-	60	41.489
ENSPEMG00000005321	Patz1	80	41.111	ENSPEMG00000000610	Mynn	90	30.841

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000005321	Patz1	100	98.908	ENSG00000100105	PATZ1	100	98.908	Homo_sapiens
ENSPEMG00000005321	Patz1	99	60.421	ENSAPOG00000018447	patz1	100	59.177	Acanthochromis_polyacanthus
ENSPEMG00000005321	Patz1	100	98.544	ENSAMEG00000007074	PATZ1	100	98.544	Ailuropoda_melanoleuca
ENSPEMG00000005321	Patz1	100	59.961	ENSACIG00000016779	patz1	100	59.961	Amphilophus_citrinellus
ENSPEMG00000005321	Patz1	100	57.703	ENSAPEG00000013354	patz1	100	57.703	Amphiprion_percula
ENSPEMG00000005321	Patz1	100	62.745	ENSATEG00000011260	patz1	100	62.353	Anabas_testudineus
ENSPEMG00000005321	Patz1	85	91.096	ENSAPLG00000003934	PATZ1	99	91.096	Anas_platyrhynchos
ENSPEMG00000005321	Patz1	100	98.908	ENSANAG00000029603	PATZ1	100	98.908	Aotus_nancymaae
ENSPEMG00000005321	Patz1	97	62.424	ENSAMXG00000002273	patz1	98	60.682	Astyanax_mexicanus
ENSPEMG00000005321	Patz1	100	98.752	ENSBTAG00000005478	PATZ1	100	98.752	Bos_taurus
ENSPEMG00000005321	Patz1	100	98.908	ENSCJAG00000010978	PATZ1	100	98.908	Callithrix_jacchus
ENSPEMG00000005321	Patz1	100	98.908	ENSCAFG00000013087	PATZ1	100	98.690	Canis_familiaris
ENSPEMG00000005321	Patz1	100	98.284	ENSCHIG00000020203	PATZ1	100	98.284	Capra_hircus
ENSPEMG00000005321	Patz1	100	98.752	ENSTSYG00000033183	PATZ1	100	98.752	Carlito_syrichta
ENSPEMG00000005321	Patz1	100	98.908	ENSCCAG00000028772	PATZ1	100	98.908	Cebus_capucinus
ENSPEMG00000005321	Patz1	100	98.908	ENSCATG00000006101	PATZ1	100	98.908	Cercocebus_atys
ENSPEMG00000005321	Patz1	100	88.696	ENSCPBG00000011277	PATZ1	100	88.551	Chrysemys_picta_bellii
ENSPEMG00000005321	Patz1	100	98.908	ENSCANG00000024972	PATZ1	100	98.908	Colobus_angolensis_palliatus
ENSPEMG00000005321	Patz1	100	97.525	ENSCGRG00001004071	Patz1	100	97.525	Cricetulus_griseus_chok1gshd
ENSPEMG00000005321	Patz1	93	98.325	ENSCGRG00000004814	Patz1	100	98.325	Cricetulus_griseus_crigri
ENSPEMG00000005321	Patz1	100	55.168	ENSCSEG00000001385	patz1	100	55.245	Cynoglossus_semilaevis
ENSPEMG00000005321	Patz1	100	58.997	ENSCVAG00000007684	patz1	100	59.292	Cyprinodon_variegatus
ENSPEMG00000005321	Patz1	97	60.757	ENSDARG00000076584	patz1	98	58.815	Danio_rerio
ENSPEMG00000005321	Patz1	90	98.223	ENSDNOG00000003183	PATZ1	100	98.223	Dasypus_novemcinctus
ENSPEMG00000005321	Patz1	100	98.908	ENSDORG00000023834	Patz1	100	98.908	Dipodomys_ordii
ENSPEMG00000005321	Patz1	100	98.752	ENSECAG00000025030	PATZ1	100	98.752	Equus_caballus
ENSPEMG00000005321	Patz1	99	61.626	ENSELUG00000002333	patz1	100	58.262	Esox_lucius
ENSPEMG00000005321	Patz1	100	98.908	ENSFCAG00000030253	PATZ1	100	98.908	Felis_catus
ENSPEMG00000005321	Patz1	86	91.356	ENSFALG00000007450	PATZ1	99	91.482	Ficedula_albicollis
ENSPEMG00000005321	Patz1	96	97.076	ENSFDAG00000005614	PATZ1	100	97.076	Fukomys_damarensis
ENSPEMG00000005321	Patz1	100	57.625	ENSFHEG00000014755	patz1	100	57.918	Fundulus_heteroclitus
ENSPEMG00000005321	Patz1	98	55.028	ENSGMOG00000001062	patz1	98	54.785	Gadus_morhua
ENSPEMG00000005321	Patz1	100	88.058	ENSGALG00000006934	PATZ1	100	88.345	Gallus_gallus
ENSPEMG00000005321	Patz1	100	59.029	ENSGAFG00000010053	patz1	100	58.003	Gambusia_affinis
ENSPEMG00000005321	Patz1	85	91.595	ENSGAGG00000003214	PATZ1	100	91.595	Gopherus_agassizii
ENSPEMG00000005321	Patz1	100	99.064	ENSGGOG00000017171	PATZ1	100	99.064	Gorilla_gorilla
ENSPEMG00000005321	Patz1	98	62.451	ENSHCOG00000017644	patz1	98	61.121	Hippocampus_comes
ENSPEMG00000005321	Patz1	97	60.285	ENSIPUG00000017653	patz1	97	53.890	Ictalurus_punctatus
ENSPEMG00000005321	Patz1	100	98.908	ENSSTOG00000020707	PATZ1	100	98.908	Ictidomys_tridecemlineatus
ENSPEMG00000005321	Patz1	100	96.952	ENSJJAG00000015259	Patz1	100	96.952	Jaculus_jaculus
ENSPEMG00000005321	Patz1	100	57.632	ENSKMAG00000008157	patz1	100	57.447	Kryptolebias_marmoratus
ENSPEMG00000005321	Patz1	100	97.962	ENSLAFG00000002317	PATZ1	100	97.962	Loxodonta_africana
ENSPEMG00000005321	Patz1	100	98.752	ENSMFAG00000040968	PATZ1	100	98.752	Macaca_fascicularis
ENSPEMG00000005321	Patz1	100	98.752	ENSMNEG00000037588	PATZ1	100	98.752	Macaca_nemestrina
ENSPEMG00000005321	Patz1	100	98.908	ENSMLEG00000030938	PATZ1	100	98.908	Mandrillus_leucophaeus
ENSPEMG00000005321	Patz1	100	57.625	ENSMAMG00000023652	patz1	100	57.625	Mastacembelus_armatus
ENSPEMG00000005321	Patz1	85	87.350	ENSMGAG00000008439	PATZ1	100	87.350	Meleagris_gallopavo
ENSPEMG00000005321	Patz1	100	99.376	ENSMAUG00000004129	Patz1	100	99.376	Mesocricetus_auratus
ENSPEMG00000005321	Patz1	100	98.752	ENSMICG00000005430	PATZ1	100	98.752	Microcebus_murinus
ENSPEMG00000005321	Patz1	100	99.376	ENSMOCG00000014488	Patz1	100	99.376	Microtus_ochrogaster
ENSPEMG00000005321	Patz1	99	55.469	ENSMMOG00000021679	patz1	100	48.656	Mola_mola
ENSPEMG00000005321	Patz1	100	57.143	ENSMALG00000021172	patz1	100	57.143	Monopterus_albus
ENSPEMG00000005321	Patz1	100	98.908	MGP_CAROLIEiJ_G0016007	Patz1	100	98.908	Mus_caroli
ENSPEMG00000005321	Patz1	100	99.064	ENSMUSG00000020453	Patz1	100	99.064	Mus_musculus
ENSPEMG00000005321	Patz1	100	99.064	MGP_PahariEiJ_G0016884	Patz1	100	99.064	Mus_pahari
ENSPEMG00000005321	Patz1	100	99.064	MGP_SPRETEiJ_G0016846	Patz1	100	99.064	Mus_spretus
ENSPEMG00000005321	Patz1	100	98.596	ENSMLUG00000009942	PATZ1	100	98.596	Myotis_lucifugus
ENSPEMG00000005321	Patz1	100	99.376	ENSNGAG00000010268	Patz1	100	99.376	Nannospalax_galili
ENSPEMG00000005321	Patz1	100	59.768	ENSNBRG00000016032	patz1	100	59.768	Neolamprologus_brichardi
ENSPEMG00000005321	Patz1	68	93.978	ENSMEUG00000016293	PATZ1	100	93.978	Notamacropus_eugenii
ENSPEMG00000005321	Patz1	100	98.440	ENSODEG00000003589	PATZ1	100	98.440	Octodon_degus
ENSPEMG00000005321	Patz1	100	58.419	ENSONIG00000004248	patz1	100	58.419	Oreochromis_niloticus
ENSPEMG00000005321	Patz1	100	92.888	ENSOANG00000014654	PATZ1	100	94.049	Ornithorhynchus_anatinus
ENSPEMG00000005321	Patz1	100	58.626	ENSORLG00020010937	patz1	100	58.626	Oryzias_latipes_hni
ENSPEMG00000005321	Patz1	100	58.003	ENSORLG00015007396	patz1	100	58.003	Oryzias_latipes_hsok
ENSPEMG00000005321	Patz1	100	57.459	ENSOMEG00000006636	patz1	100	57.459	Oryzias_melastigma
ENSPEMG00000005321	Patz1	100	98.399	ENSOGAG00000027905	PATZ1	100	98.399	Otolemur_garnettii
ENSPEMG00000005321	Patz1	100	99.064	ENSPPAG00000033227	PATZ1	100	99.064	Pan_paniscus
ENSPEMG00000005321	Patz1	100	98.908	ENSPPRG00000001573	PATZ1	100	98.908	Panthera_pardus
ENSPEMG00000005321	Patz1	86	98.482	ENSPTIG00000007937	PATZ1	91	98.482	Panthera_tigris_altaica
ENSPEMG00000005321	Patz1	100	99.064	ENSPTRG00000014268	PATZ1	100	99.064	Pan_troglodytes
ENSPEMG00000005321	Patz1	100	98.908	ENSPANG00000006821	PATZ1	100	98.836	Papio_anubis
ENSPEMG00000005321	Patz1	100	62.313	ENSPKIG00000019584	patz1	100	62.127	Paramormyrops_kingsleyae
ENSPEMG00000005321	Patz1	60	83.051	ENSPSIG00000016553	-	91	83.051	Pelodiscus_sinensis
ENSPEMG00000005321	Patz1	58	95.455	ENSPSIG00000011562	-	100	96.286	Pelodiscus_sinensis
ENSPEMG00000005321	Patz1	100	57.123	ENSPMGG00000010196	patz1	100	57.123	Periophthalmus_magnuspinnatus
ENSPEMG00000005321	Patz1	100	57.625	ENSPLAG00000010425	patz1	100	57.771	Poecilia_latipinna
ENSPEMG00000005321	Patz1	100	57.709	ENSPMEG00000000255	patz1	100	57.856	Poecilia_mexicana
ENSPEMG00000005321	Patz1	100	57.182	ENSPREG00000002440	patz1	100	57.320	Poecilia_reticulata
ENSPEMG00000005321	Patz1	100	98.690	ENSPPYG00000011732	PATZ1	100	98.690	Pongo_abelii
ENSPEMG00000005321	Patz1	100	98.596	ENSPCOG00000019729	PATZ1	100	98.596	Propithecus_coquereli
ENSPEMG00000005321	Patz1	100	98.544	ENSPVAG00000001749	PATZ1	100	98.544	Pteropus_vampyrus
ENSPEMG00000005321	Patz1	100	58.906	ENSPNYG00000013542	patz1	100	58.906	Pundamilia_nyererei
ENSPEMG00000005321	Patz1	84	60.292	ENSPNAG00000017222	patz1	99	60.292	Pygocentrus_nattereri
ENSPEMG00000005321	Patz1	100	98.908	ENSRBIG00000044231	PATZ1	100	98.908	Rhinopithecus_bieti
ENSPEMG00000005321	Patz1	100	98.908	ENSRROG00000037155	PATZ1	100	98.908	Rhinopithecus_roxellana
ENSPEMG00000005321	Patz1	100	98.908	ENSSBOG00000003894	PATZ1	100	98.908	Saimiri_boliviensis_boliviensis
ENSPEMG00000005321	Patz1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSPEMG00000005321	Patz1	100	86.629	ENSSPUG00000015298	PATZ1	100	86.486	Sphenodon_punctatus
ENSPEMG00000005321	Patz1	85	98.110	ENSSSCG00000010027	PATZ1	100	98.321	Sus_scrofa
ENSPEMG00000005321	Patz1	100	57.989	ENSTRUG00000015366	patz1	100	57.989	Takifugu_rubripes
ENSPEMG00000005321	Patz1	100	98.544	ENSTTRG00000010279	PATZ1	100	98.544	Tursiops_truncatus
ENSPEMG00000005321	Patz1	100	98.908	ENSUAMG00000015014	PATZ1	100	98.908	Ursus_americanus
ENSPEMG00000005321	Patz1	100	72.899	ENSXETG00000004190	patz1	100	72.174	Xenopus_tropicalis
ENSPEMG00000005321	Patz1	100	58.003	ENSXMAG00000015531	patz1	100	58.150	Xiphophorus_maculatus