EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000006226 (Gene tree)
Gene ID: 102913699
Gene Symbol: Mbd4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 8932 bases
Position: chrKI615421.1:1342011-1350942
Accession: 102913699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000004117	MBD	PF01429.19	3.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000007456	-	1554	XM_015997257	ENSPEMP00000004117	518 (aa)	XP_015852743	-
ENSPEMT00000007461	-	417	-	ENSPEMP00000004121	139 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000006226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000006226's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000006226	Mbd4	97	61.524	ENSG00000129071	MBD4	95	61.942	Homo_sapiens
ENSPEMG00000006226	Mbd4	99	58.410	ENSAMEG00000004562	MBD4	93	58.226	Ailuropoda_melanoleuca
ENSPEMG00000006226	Mbd4	97	56.455	ENSBTAG00000021645	MBD4	91	56.069	Bos_taurus
ENSPEMG00000006226	Mbd4	99	59.083	ENSCJAG00000017293	MBD4	94	59.083	Callithrix_jacchus
ENSPEMG00000006226	Mbd4	99	58.195	ENSCAFG00000004867	MBD4	94	57.459	Canis_familiaris
ENSPEMG00000006226	Mbd4	99	58.195	ENSCAFG00020007082	MBD4	94	57.459	Canis_lupus_dingo
ENSPEMG00000006226	Mbd4	97	56.238	ENSCHIG00000009760	MBD4	91	56.238	Capra_hircus
ENSPEMG00000006226	Mbd4	97	59.733	ENSCCAG00000029796	MBD4	90	59.733	Cebus_capucinus
ENSPEMG00000006226	Mbd4	97	61.877	ENSCATG00000035211	MBD4	90	61.877	Cercocebus_atys
ENSPEMG00000006226	Mbd4	99	56.425	ENSCLAG00000008974	MBD4	94	56.530	Chinchilla_lanigera
ENSPEMG00000006226	Mbd4	97	62.261	ENSCSAG00000009037	MBD4	90	62.261	Chlorocebus_sabaeus
ENSPEMG00000006226	Mbd4	97	61.877	ENSCANG00000007120	MBD4	90	61.877	Colobus_angolensis_palliatus
ENSPEMG00000006226	Mbd4	99	74.906	ENSCGRG00001003507	Mbd4	94	75.468	Cricetulus_griseus_chok1gshd
ENSPEMG00000006226	Mbd4	99	74.906	ENSCGRG00000010974	Mbd4	94	75.468	Cricetulus_griseus_crigri
ENSPEMG00000006226	Mbd4	99	58.011	ENSDNOG00000049619	MBD4	94	57.328	Dasypus_novemcinctus
ENSPEMG00000006226	Mbd4	86	58.797	ENSDORG00000000902	-	96	56.652	Dipodomys_ordii
ENSPEMG00000006226	Mbd4	99	60.221	ENSEASG00005014800	MBD4	94	60.444	Equus_asinus_asinus
ENSPEMG00000006226	Mbd4	99	60.221	ENSECAG00000022106	MBD4	94	60.444	Equus_caballus
ENSPEMG00000006226	Mbd4	94	56.522	ENSEEUG00000011459	MBD4	94	56.522	Erinaceus_europaeus
ENSPEMG00000006226	Mbd4	97	59.579	ENSFCAG00000000083	MBD4	90	59.579	Felis_catus
ENSPEMG00000006226	Mbd4	86	37.634	ENSGMOG00000013830	mbd4	93	37.634	Gadus_morhua
ENSPEMG00000006226	Mbd4	97	43.590	ENSGAGG00000018644	MBD4	84	45.325	Gopherus_agassizii
ENSPEMG00000006226	Mbd4	97	60.952	ENSGGOG00000010698	MBD4	94	60.952	Gorilla_gorilla
ENSPEMG00000006226	Mbd4	99	57.542	ENSHGLG00000009034	MBD4	94	57.542	Heterocephalus_glaber_female
ENSPEMG00000006226	Mbd4	99	57.542	ENSHGLG00100000135	MBD4	94	57.542	Heterocephalus_glaber_male
ENSPEMG00000006226	Mbd4	97	59.345	ENSSTOG00000020663	MBD4	91	59.345	Ictidomys_tridecemlineatus
ENSPEMG00000006226	Mbd4	87	39.351	ENSLOCG00000013054	MBD4	93	38.105	Lepisosteus_oculatus
ENSPEMG00000006226	Mbd4	97	60.721	ENSLAFG00000010609	MBD4	89	60.194	Loxodonta_africana
ENSPEMG00000006226	Mbd4	97	61.686	ENSMFAG00000002266	MBD4	90	61.686	Macaca_fascicularis
ENSPEMG00000006226	Mbd4	97	61.143	ENSMMUG00000012723	MBD4	90	61.143	Macaca_mulatta
ENSPEMG00000006226	Mbd4	97	61.686	ENSMNEG00000029752	MBD4	94	61.686	Macaca_nemestrina
ENSPEMG00000006226	Mbd4	97	61.686	ENSMLEG00000024859	MBD4	90	61.686	Mandrillus_leucophaeus
ENSPEMG00000006226	Mbd4	99	60.185	ENSMICG00000008022	MBD4	94	60.185	Microcebus_murinus
ENSPEMG00000006226	Mbd4	72	67.102	ENSMOCG00000002466	-	98	64.230	Microtus_ochrogaster
ENSPEMG00000006226	Mbd4	86	52.128	ENSMODG00000006399	-	92	52.128	Monodelphis_domestica
ENSPEMG00000006226	Mbd4	99	71.082	MGP_CAROLIEiJ_G0028760	Mbd4	94	70.654	Mus_caroli
ENSPEMG00000006226	Mbd4	99	72.814	ENSMUSG00000030322	Mbd4	94	72.381	Mus_musculus
ENSPEMG00000006226	Mbd4	99	70.446	MGP_PahariEiJ_G0022511	-	94	70.074	Mus_pahari
ENSPEMG00000006226	Mbd4	99	72.624	MGP_SPRETEiJ_G0029788	Mbd4	94	72.243	Mus_spretus
ENSPEMG00000006226	Mbd4	99	58.487	ENSMPUG00000017195	MBD4	94	57.934	Mustela_putorius_furo
ENSPEMG00000006226	Mbd4	95	61.240	ENSMLUG00000014766	MBD4	94	61.089	Myotis_lucifugus
ENSPEMG00000006226	Mbd4	97	60.803	ENSNLEG00000005337	MBD4	90	60.803	Nomascus_leucogenys
ENSPEMG00000006226	Mbd4	99	52.788	ENSOPRG00000000473	MBD4	93	52.788	Ochotona_princeps
ENSPEMG00000006226	Mbd4	86	39.746	ENSONIG00000017212	mbd4	93	39.746	Oreochromis_niloticus
ENSPEMG00000006226	Mbd4	80	42.729	ENSOANG00000004589	-	96	41.892	Ornithorhynchus_anatinus
ENSPEMG00000006226	Mbd4	99	51.642	ENSOCUG00000013006	MBD4	94	50.733	Oryctolagus_cuniculus
ENSPEMG00000006226	Mbd4	99	56.343	ENSOGAG00000010236	MBD4	94	56.343	Otolemur_garnettii
ENSPEMG00000006226	Mbd4	99	55.268	ENSOARG00000014699	MBD4	94	55.268	Ovis_aries
ENSPEMG00000006226	Mbd4	97	60.994	ENSPPAG00000036528	MBD4	90	60.994	Pan_paniscus
ENSPEMG00000006226	Mbd4	97	59.501	ENSPPRG00000016480	MBD4	90	59.501	Panthera_pardus
ENSPEMG00000006226	Mbd4	97	61.333	ENSPTRG00000015377	MBD4	90	61.333	Pan_troglodytes
ENSPEMG00000006226	Mbd4	97	62.333	ENSPANG00000015047	MBD4	90	62.333	Papio_anubis
ENSPEMG00000006226	Mbd4	95	43.173	ENSPSIG00000007892	MBD4	90	43.068	Pelodiscus_sinensis
ENSPEMG00000006226	Mbd4	90	49.393	ENSPCIG00000002276	-	92	48.479	Phascolarctos_cinereus
ENSPEMG00000006226	Mbd4	97	60.345	ENSPPYG00000013417	MBD4	90	60.345	Pongo_abelii
ENSPEMG00000006226	Mbd4	97	57.524	ENSPCAG00000012915	MBD4	94	57.361	Procavia_capensis
ENSPEMG00000006226	Mbd4	99	59.704	ENSPVAG00000005238	MBD4	94	59.704	Pteropus_vampyrus
ENSPEMG00000006226	Mbd4	99	71.985	ENSRNOG00000010919	Mbd4	94	71.614	Rattus_norvegicus
ENSPEMG00000006226	Mbd4	97	61.686	ENSRBIG00000027722	MBD4	90	61.686	Rhinopithecus_bieti
ENSPEMG00000006226	Mbd4	97	61.494	ENSRROG00000029136	MBD4	90	61.494	Rhinopithecus_roxellana
ENSPEMG00000006226	Mbd4	99	59.158	ENSSBOG00000016810	MBD4	94	59.007	Saimiri_boliviensis_boliviensis
ENSPEMG00000006226	Mbd4	90	49.197	ENSSHAG00000012953	MBD4	84	49.598	Sarcophilus_harrisii
ENSPEMG00000006226	Mbd4	86	39.159	ENSSDUG00000001365	mbd4	86	38.717	Seriola_dumerili
ENSPEMG00000006226	Mbd4	82	40.000	ENSSLDG00000010295	MBD4	80	39.535	Seriola_lalandi_dorsalis
ENSPEMG00000006226	Mbd4	81	48.037	ENSSARG00000004496	-	75	48.037	Sorex_araneus
ENSPEMG00000006226	Mbd4	91	42.607	ENSSPUG00000017344	MBD4	91	42.105	Sphenodon_punctatus
ENSPEMG00000006226	Mbd4	99	58.272	ENSSSCG00000033303	MBD4	96	58.118	Sus_scrofa
ENSPEMG00000006226	Mbd4	76	89.796	ENSTBEG00000003041	-	70	89.796	Tupaia_belangeri
ENSPEMG00000006226	Mbd4	96	60.425	ENSTTRG00000011265	MBD4	92	60.271	Tursiops_truncatus
ENSPEMG00000006226	Mbd4	87	61.884	ENSUAMG00000000814	MBD4	93	61.670	Ursus_americanus
ENSPEMG00000006226	Mbd4	99	59.300	ENSUMAG00000017542	MBD4	94	58.965	Ursus_maritimus
ENSPEMG00000006226	Mbd4	64	60.825	ENSVPAG00000004040	-	62	58.763	Vicugna_pacos
ENSPEMG00000006226	Mbd4	99	58.011	ENSVVUG00000014222	MBD4	94	57.459	Vulpes_vulpes
ENSPEMG00000006226	Mbd4	86	41.758	ENSXETG00000026622	mbd4	82	41.319	Xenopus_tropicalis