EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000006254 (Gene tree)
Gene ID: 102918755
Gene Symbol: Srrm1
Alias: -
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 31512 bases
Position: chrKI615381.1:5519149-5550660
Accession: 102918755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000004180	PWI	PF01480.17	5.2e-30	1	1
ENSPEMP00000004169	PWI	PF01480.17	6.4e-30	1	1
ENSPEMP00000004164	PWI	PF01480.17	6.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000007582	-	2814	-	ENSPEMP00000004180	937 (aa)	-	-
ENSPEMT00000007557	-	3101	XM_006975667	ENSPEMP00000004164	922 (aa)	XP_006975729	UPI00042AAD2A
ENSPEMT00000007564	-	3059	XM_006975668	ENSPEMP00000004169	908 (aa)	XP_006975730	UPI00042AD992

Gene Model

Click here to download ENSPEMG00000006254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000006254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000006254	Srrm1	74	95.501	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSPEMG00000006254	Srrm1	50	71.573	ENSAPLG00000002066	SRRM1	59	66.330	Anas_platyrhynchos
ENSPEMG00000006254	Srrm1	88	96.030	ENSCAFG00020020948	SRRM1	99	96.030	Canis_lupus_dingo
ENSPEMG00000006254	Srrm1	54	96.552	ENSCCAG00000029474	SRRM1	96	96.957	Cebus_capucinus
ENSPEMG00000006254	Srrm1	52	95.808	ENSCHOG00000000027	SRRM1	51	95.266	Choloepus_hoffmanni
ENSPEMG00000006254	Srrm1	100	98.018	ENSCGRG00001014174	Srrm1	100	98.018	Cricetulus_griseus_chok1gshd
ENSPEMG00000006254	Srrm1	99	98.033	ENSCGRG00000017603	Srrm1	100	98.033	Cricetulus_griseus_crigri
ENSPEMG00000006254	Srrm1	100	98.377	ENSMAUG00000015705	Srrm1	100	98.377	Mesocricetus_auratus
ENSPEMG00000006254	Srrm1	100	98.701	MGP_CAROLIEiJ_G0026636	Srrm1	100	98.701	Mus_caroli
ENSPEMG00000006254	Srrm1	100	98.268	ENSMUSG00000028809	Srrm1	100	98.268	Mus_musculus
ENSPEMG00000006254	Srrm1	100	98.592	MGP_PahariEiJ_G0028969	Srrm1	100	98.592	Mus_pahari
ENSPEMG00000006254	Srrm1	100	98.593	MGP_SPRETEiJ_G0027616	Srrm1	100	98.593	Mus_spretus
ENSPEMG00000006254	Srrm1	100	96.966	ENSNGAG00000014562	Srrm1	100	96.966	Nannospalax_galili
ENSPEMG00000006254	Srrm1	54	97.166	ENSNLEG00000008966	SRRM1	94	97.166	Nomascus_leucogenys
ENSPEMG00000006254	Srrm1	53	86.275	ENSMEUG00000014704	SRRM1	60	79.302	Notamacropus_eugenii
ENSPEMG00000006254	Srrm1	92	96.357	ENSOARG00000006453	SRRM1	99	96.357	Ovis_aries
ENSPEMG00000006254	Srrm1	100	98.350	ENSRNOG00000018194	Srrm1	100	98.350	Rattus_norvegicus
ENSPEMG00000006254	Srrm1	89	96.098	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSPEMG00000006254	Srrm1	61	91.176	ENSSARG00000013718	SRRM1	60	89.542	Sorex_araneus