EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000006336 (Gene tree)
Gene ID: 102918474
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 561 bases
Position: chrKI619448.1:927-1487
Accession: 102918474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000004160	RNA_pol_L_2	PF13656.6	9.1e-29	1	1
ENSPEMP00000004160	RNA_pol_L	PF01193.24	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000007548	-	393	XM_006998710	ENSPEMP00000004160	130 (aa)	XP_006998772	-

Gene Model

Click here to download ENSPEMG00000006336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000006336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000006336	-	79	32.039	ENSPEMG00000015733	Polr2j	85	32.039
ENSPEMG00000006336	-	100	96.992	ENSPEMG00000006799	-	100	96.992

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000006336	-	100	93.233	ENSG00000186184	POLR1D	100	94.828	Homo_sapiens
ENSPEMG00000006336	-	85	68.468	ENSAPOG00000021882	polr1d	98	68.468	Acanthochromis_polyacanthus
ENSPEMG00000006336	-	95	93.548	ENSAMEG00000019095	POLR1D	99	93.548	Ailuropoda_melanoleuca
ENSPEMG00000006336	-	82	69.444	ENSACIG00000013328	polr1d	94	69.444	Amphilophus_citrinellus
ENSPEMG00000006336	-	86	67.857	ENSAOCG00000018500	polr1d	98	67.857	Amphiprion_ocellaris
ENSPEMG00000006336	-	86	66.964	ENSAPEG00000009489	polr1d	98	66.964	Amphiprion_percula
ENSPEMG00000006336	-	88	64.035	ENSATEG00000019322	polr1d	94	66.355	Anabas_testudineus
ENSPEMG00000006336	-	85	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSPEMG00000006336	-	100	91.729	ENSANAG00000024486	POLR1D	100	91.729	Aotus_nancymaae
ENSPEMG00000006336	-	82	70.093	ENSACLG00000023805	polr1d	94	70.093	Astatotilapia_calliptera
ENSPEMG00000006336	-	82	67.925	ENSAMXG00000036118	polr1d	92	67.925	Astyanax_mexicanus
ENSPEMG00000006336	-	100	88.722	ENSBTAG00000008642	POLR1D	100	88.722	Bos_taurus
ENSPEMG00000006336	-	100	88.722	ENSBTAG00000033252	-	100	88.722	Bos_taurus
ENSPEMG00000006336	-	63	36.585	WBGene00010230	rpac-19	57	36.585	Caenorhabditis_elegans
ENSPEMG00000006336	-	100	90.977	ENSCJAG00000044669	POLR1D	100	90.977	Callithrix_jacchus
ENSPEMG00000006336	-	100	91.729	ENSCAFG00000006755	POLR1D	100	91.729	Canis_familiaris
ENSPEMG00000006336	-	100	89.474	ENSCHIG00000021910	POLR1D	100	89.474	Capra_hircus
ENSPEMG00000006336	-	98	77.692	ENSTSYG00000034852	-	98	79.832	Carlito_syrichta
ENSPEMG00000006336	-	95	89.516	ENSTSYG00000026817	-	93	89.516	Carlito_syrichta
ENSPEMG00000006336	-	53	75.362	ENSCAPG00000006058	-	70	75.362	Cavia_aperea
ENSPEMG00000006336	-	53	76.812	ENSCPOG00000030450	-	70	76.812	Cavia_porcellus
ENSPEMG00000006336	-	100	90.226	ENSCCAG00000021349	-	100	90.226	Cebus_capucinus
ENSPEMG00000006336	-	100	75.940	ENSCCAG00000020191	-	100	75.940	Cebus_capucinus
ENSPEMG00000006336	-	100	81.955	ENSCATG00000022900	-	100	81.955	Cercocebus_atys
ENSPEMG00000006336	-	100	91.729	ENSCATG00000030710	-	100	91.729	Cercocebus_atys
ENSPEMG00000006336	-	95	91.935	ENSCLAG00000017623	POLR1D	100	91.935	Chinchilla_lanigera
ENSPEMG00000006336	-	75	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSPEMG00000006336	-	100	90.226	ENSCANG00000037694	-	100	90.226	Colobus_angolensis_palliatus
ENSPEMG00000006336	-	100	91.729	ENSCANG00000028632	-	100	91.729	Colobus_angolensis_palliatus
ENSPEMG00000006336	-	100	94.737	ENSCGRG00001021251	Polr1d	100	94.737	Cricetulus_griseus_chok1gshd
ENSPEMG00000006336	-	100	94.737	ENSCGRG00000011639	Polr1d	100	94.737	Cricetulus_griseus_crigri
ENSPEMG00000006336	-	87	65.487	ENSCSEG00000018268	polr1d	97	65.487	Cynoglossus_semilaevis
ENSPEMG00000006336	-	81	70.476	ENSCVAG00000018527	polr1d	92	70.476	Cyprinodon_variegatus
ENSPEMG00000006336	-	85	64.545	ENSDARG00000037570	polr1d	98	64.545	Danio_rerio
ENSPEMG00000006336	-	100	90.226	ENSDNOG00000043676	-	100	90.226	Dasypus_novemcinctus
ENSPEMG00000006336	-	100	88.806	ENSDNOG00000046247	-	100	88.806	Dasypus_novemcinctus
ENSPEMG00000006336	-	100	90.226	ENSDORG00000029155	Polr1d	100	90.226	Dipodomys_ordii
ENSPEMG00000006336	-	66	44.186	FBgn0086447	l(2)37Cg	81	44.186	Drosophila_melanogaster
ENSPEMG00000006336	-	95	85.484	ENSETEG00000012797	POLR1D	100	85.484	Echinops_telfairi
ENSPEMG00000006336	-	66	72.093	ENSEBUG00000011748	polr1d	60	72.093	Eptatretus_burgeri
ENSPEMG00000006336	-	96	91.406	ENSEASG00005022487	POLR1D	99	91.406	Equus_asinus_asinus
ENSPEMG00000006336	-	95	92.742	ENSEEUG00000013144	POLR1D	100	92.742	Erinaceus_europaeus
ENSPEMG00000006336	-	82	64.151	ENSELUG00000005105	rpac2	93	64.151	Esox_lucius
ENSPEMG00000006336	-	100	91.729	ENSFCAG00000030162	POLR1D	100	91.729	Felis_catus
ENSPEMG00000006336	-	74	76.042	ENSFALG00000011463	POLR1D	95	76.042	Ficedula_albicollis
ENSPEMG00000006336	-	100	90.226	ENSFDAG00000004463	POLR1D	100	90.226	Fukomys_damarensis
ENSPEMG00000006336	-	84	70.909	ENSFHEG00000015410	polr1d	96	70.909	Fundulus_heteroclitus
ENSPEMG00000006336	-	81	71.429	ENSGAFG00000001693	polr1d	92	71.429	Gambusia_affinis
ENSPEMG00000006336	-	90	66.949	ENSGACG00000018585	polr1d	100	66.949	Gasterosteus_aculeatus
ENSPEMG00000006336	-	83	75.000	ENSGAGG00000008503	POLR1D	95	75.000	Gopherus_agassizii
ENSPEMG00000006336	-	100	93.233	ENSGGOG00000004235	POLR1D	100	93.233	Gorilla_gorilla
ENSPEMG00000006336	-	82	70.093	ENSHBUG00000002111	polr1d	94	70.093	Haplochromis_burtoni
ENSPEMG00000006336	-	100	88.722	ENSHGLG00000003202	POLR1D	100	88.722	Heterocephalus_glaber_female
ENSPEMG00000006336	-	100	88.722	ENSHGLG00100009393	POLR1D	100	88.722	Heterocephalus_glaber_male
ENSPEMG00000006336	-	82	67.290	ENSHCOG00000003258	polr1d	94	67.290	Hippocampus_comes
ENSPEMG00000006336	-	84	70.642	ENSIPUG00000014810	polr1d	95	70.642	Ictalurus_punctatus
ENSPEMG00000006336	-	100	92.481	ENSSTOG00000013877	POLR1D	100	92.481	Ictidomys_tridecemlineatus
ENSPEMG00000006336	-	97	75.397	ENSJJAG00000021667	-	75	75.397	Jaculus_jaculus
ENSPEMG00000006336	-	95	92.742	ENSJJAG00000022671	-	100	92.500	Jaculus_jaculus
ENSPEMG00000006336	-	82	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSPEMG00000006336	-	81	71.429	ENSLBEG00000015919	polr1d	92	71.429	Labrus_bergylta
ENSPEMG00000006336	-	88	62.609	ENSLACG00000006810	POLR1D	95	62.609	Latimeria_chalumnae
ENSPEMG00000006336	-	55	78.378	ENSLOCG00000014976	polr1d	100	78.378	Lepisosteus_oculatus
ENSPEMG00000006336	-	100	83.459	ENSLAFG00000032290	POLR1D	100	83.459	Loxodonta_africana
ENSPEMG00000006336	-	98	92.188	ENSMFAG00000045264	POLR1D	99	92.188	Macaca_fascicularis
ENSPEMG00000006336	-	89	93.966	ENSMMUG00000020386	POLR1D	100	93.966	Macaca_mulatta
ENSPEMG00000006336	-	100	73.684	ENSMMUG00000041570	-	100	73.684	Macaca_mulatta
ENSPEMG00000006336	-	100	92.481	ENSMNEG00000008630	-	100	92.481	Macaca_nemestrina
ENSPEMG00000006336	-	100	76.692	ENSMNEG00000038120	-	100	76.692	Macaca_nemestrina
ENSPEMG00000006336	-	100	82.707	ENSMLEG00000032251	-	100	82.707	Mandrillus_leucophaeus
ENSPEMG00000006336	-	100	92.481	ENSMLEG00000041048	-	100	92.481	Mandrillus_leucophaeus
ENSPEMG00000006336	-	78	70.297	ENSMAMG00000014834	polr1d	94	70.297	Mastacembelus_armatus
ENSPEMG00000006336	-	78	73.529	ENSMZEG00005006638	polr1d	90	73.529	Maylandia_zebra
ENSPEMG00000006336	-	71	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSPEMG00000006336	-	100	93.985	ENSMAUG00000001946	Polr1d	100	93.985	Mesocricetus_auratus
ENSPEMG00000006336	-	100	90.226	ENSMICG00000016883	-	100	90.226	Microcebus_murinus
ENSPEMG00000006336	-	99	73.485	ENSMICG00000007349	-	100	73.485	Microcebus_murinus
ENSPEMG00000006336	-	99	93.939	ENSMOCG00000021288	Polr1d	99	93.939	Microtus_ochrogaster
ENSPEMG00000006336	-	82	69.159	ENSMMOG00000009605	polr1d	94	69.159	Mola_mola
ENSPEMG00000006336	-	82	83.962	ENSMODG00000023881	POLR1D	93	83.962	Monodelphis_domestica
ENSPEMG00000006336	-	82	66.355	ENSMALG00000010652	polr1d	94	66.355	Monopterus_albus
ENSPEMG00000006336	-	100	87.970	MGP_CAROLIEiJ_G0028034	Polr1d	100	87.970	Mus_caroli
ENSPEMG00000006336	-	100	87.970	ENSMUSG00000029642	Polr1d	100	87.970	Mus_musculus
ENSPEMG00000006336	-	100	87.218	MGP_PahariEiJ_G0024600	Polr1d	100	87.218	Mus_pahari
ENSPEMG00000006336	-	100	87.218	MGP_SPRETEiJ_G0029032	Polr1d	100	87.218	Mus_spretus
ENSPEMG00000006336	-	98	82.031	ENSMLUG00000004118	-	96	82.031	Myotis_lucifugus
ENSPEMG00000006336	-	100	90.226	ENSMLUG00000027169	-	100	90.226	Myotis_lucifugus
ENSPEMG00000006336	-	89	93.103	ENSNGAG00000006014	Polr1d	100	93.103	Nannospalax_galili
ENSPEMG00000006336	-	82	70.093	ENSNBRG00000020327	polr1d	94	70.093	Neolamprologus_brichardi
ENSPEMG00000006336	-	100	93.233	ENSNLEG00000000358	POLR1D	100	93.233	Nomascus_leucogenys
ENSPEMG00000006336	-	100	75.940	ENSODEG00000014801	-	100	75.940	Octodon_degus
ENSPEMG00000006336	-	100	88.722	ENSODEG00000005294	-	100	88.722	Octodon_degus
ENSPEMG00000006336	-	81	80.952	ENSOANG00000008708	-	97	80.952	Ornithorhynchus_anatinus
ENSPEMG00000006336	-	100	89.474	ENSOCUG00000015706	POLR1D	82	89.474	Oryctolagus_cuniculus
ENSPEMG00000006336	-	82	68.224	ENSORLG00000010257	polr1d	94	68.224	Oryzias_latipes
ENSPEMG00000006336	-	85	66.667	ENSORLG00020000533	polr1d	75	66.667	Oryzias_latipes_hni
ENSPEMG00000006336	-	88	66.667	ENSORLG00015013267	polr1d	75	66.667	Oryzias_latipes_hsok
ENSPEMG00000006336	-	91	65.254	ENSOMEG00000014912	polr1d	79	65.254	Oryzias_melastigma
ENSPEMG00000006336	-	100	91.729	ENSOGAG00000014601	POLR1D	100	91.729	Otolemur_garnettii
ENSPEMG00000006336	-	95	91.129	ENSOARG00000017005	POLR1D	95	91.129	Ovis_aries
ENSPEMG00000006336	-	100	92.481	ENSPPAG00000028138	POLR1D	100	92.481	Pan_paniscus
ENSPEMG00000006336	-	99	91.667	ENSPPRG00000003381	POLR1D	99	91.667	Panthera_pardus
ENSPEMG00000006336	-	95	93.548	ENSPTIG00000018137	POLR1D	93	93.548	Panthera_tigris_altaica
ENSPEMG00000006336	-	100	93.233	ENSPTRG00000005734	POLR1D	100	93.233	Pan_troglodytes
ENSPEMG00000006336	-	100	92.481	ENSPANG00000020259	-	100	92.481	Papio_anubis
ENSPEMG00000006336	-	100	82.707	ENSPANG00000035051	-	100	82.707	Papio_anubis
ENSPEMG00000006336	-	88	60.870	ENSPKIG00000021891	polr1d	90	52.212	Paramormyrops_kingsleyae
ENSPEMG00000006336	-	95	68.548	ENSPSIG00000011822	POLR1D	96	68.548	Pelodiscus_sinensis
ENSPEMG00000006336	-	89	55.172	ENSPMGG00000012998	POLR1D	85	55.172	Periophthalmus_magnuspinnatus
ENSPEMG00000006336	-	86	64.286	ENSPMGG00000010359	polr1d	97	64.286	Periophthalmus_magnuspinnatus
ENSPEMG00000006336	-	83	59.259	ENSPMAG00000004228	polr1d	91	59.259	Petromyzon_marinus
ENSPEMG00000006336	-	82	83.962	ENSPCIG00000001673	POLR1D	93	83.962	Phascolarctos_cinereus
ENSPEMG00000006336	-	81	71.429	ENSPFOG00000023343	polr1d	92	72.500	Poecilia_formosa
ENSPEMG00000006336	-	81	71.429	ENSPLAG00000009675	polr1d	92	71.429	Poecilia_latipinna
ENSPEMG00000006336	-	81	71.429	ENSPMEG00000004628	polr1d	92	71.429	Poecilia_mexicana
ENSPEMG00000006336	-	81	71.429	ENSPREG00000022032	polr1d	92	71.429	Poecilia_reticulata
ENSPEMG00000006336	-	100	91.729	ENSPCOG00000028175	POLR1D	100	91.729	Propithecus_coquereli
ENSPEMG00000006336	-	82	70.093	ENSPNYG00000000107	polr1d	94	70.093	Pundamilia_nyererei
ENSPEMG00000006336	-	78	68.317	ENSPNAG00000001512	polr1d	87	67.308	Pygocentrus_nattereri
ENSPEMG00000006336	-	100	89.474	ENSRBIG00000000336	-	100	89.474	Rhinopithecus_bieti
ENSPEMG00000006336	-	100	92.481	ENSRBIG00000036378	-	100	92.481	Rhinopithecus_bieti
ENSPEMG00000006336	-	100	92.481	ENSRROG00000042232	-	100	92.481	Rhinopithecus_roxellana
ENSPEMG00000006336	-	100	89.474	ENSRROG00000026751	-	100	89.474	Rhinopithecus_roxellana
ENSPEMG00000006336	-	70	53.846	YNL113W	RPC19	82	47.414	Saccharomyces_cerevisiae
ENSPEMG00000006336	-	100	91.729	ENSSBOG00000028482	-	100	91.729	Saimiri_boliviensis_boliviensis
ENSPEMG00000006336	-	85	86.842	ENSSBOG00000030146	-	84	86.842	Saimiri_boliviensis_boliviensis
ENSPEMG00000006336	-	88	77.193	ENSSHAG00000001190	POLR1D	88	77.193	Sarcophilus_harrisii
ENSPEMG00000006336	-	84	73.394	ENSSFOG00015011375	polr1d	96	73.394	Scleropages_formosus
ENSPEMG00000006336	-	82	67.290	ENSSMAG00000011861	polr1d	94	67.290	Scophthalmus_maximus
ENSPEMG00000006336	-	82	66.355	ENSSDUG00000011930	polr1d	94	66.355	Seriola_dumerili
ENSPEMG00000006336	-	88	62.609	ENSSLDG00000023871	polr1d	97	62.609	Seriola_lalandi_dorsalis
ENSPEMG00000006336	-	100	90.226	ENSSARG00000007840	POLR1D	100	90.226	Sorex_araneus
ENSPEMG00000006336	-	81	75.238	ENSSPUG00000005786	POLR1D	95	72.072	Sphenodon_punctatus
ENSPEMG00000006336	-	81	71.429	ENSSPAG00000011764	polr1d	92	71.429	Stegastes_partitus
ENSPEMG00000006336	-	100	87.970	ENSSSCG00000009310	POLR1D	100	87.970	Sus_scrofa
ENSPEMG00000006336	-	74	76.042	ENSTGUG00000005450	POLR1D	100	76.042	Taeniopygia_guttata
ENSPEMG00000006336	-	80	66.346	ENSTRUG00000019741	polr1d	91	66.346	Takifugu_rubripes
ENSPEMG00000006336	-	95	91.129	ENSTBEG00000007006	POLR1D	100	91.129	Tupaia_belangeri
ENSPEMG00000006336	-	100	91.729	ENSUAMG00000011413	POLR1D	100	91.729	Ursus_americanus
ENSPEMG00000006336	-	96	93.600	ENSUMAG00000016968	POLR1D	98	93.600	Ursus_maritimus
ENSPEMG00000006336	-	100	91.729	ENSVVUG00000009216	POLR1D	100	91.729	Vulpes_vulpes
ENSPEMG00000006336	-	75	74.490	ENSXCOG00000011731	polr1d	75	74.490	Xiphophorus_couchianus
ENSPEMG00000006336	-	75	74.490	ENSXMAG00000017538	polr1d	75	74.490	Xiphophorus_maculatus