EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000006521 (Gene tree)
Gene ID: 102904897
Gene Symbol: -
Alias: -
Full Name: density regulated re-initiation and release factor
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 18486 bases
Position: chrKI615323.1:4004912-4023397
Accession: 102904897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000004270	SUI1	PF01253.22	6.6e-17	1	1
ENSPEMP00000004273	SUI1	PF01253.22	6.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000007769	-	909	XM_006970706	ENSPEMP00000004270	198 (aa)	XP_006970768	UPI00042ACA47
ENSPEMT00000007772	-	609	-	ENSPEMP00000004273	202 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000006521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000006521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000006521	-	90	71.910	ENSPEMG00000012893	-	100	76.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000006521	-	100	97.980	ENSG00000139726	DENR	100	97.980	Homo_sapiens
ENSPEMG00000006521	-	100	76.263	ENSAPOG00000021065	denr	100	76.263	Acanthochromis_polyacanthus
ENSPEMG00000006521	-	100	92.611	ENSAMEG00000014851	DENR	99	92.611	Ailuropoda_melanoleuca
ENSPEMG00000006521	-	91	81.319	ENSACIG00000007705	denr	100	76.382	Amphilophus_citrinellus
ENSPEMG00000006521	-	100	76.263	ENSAOCG00000004767	denr	100	76.263	Amphiprion_ocellaris
ENSPEMG00000006521	-	100	76.263	ENSAPEG00000006323	denr	100	76.263	Amphiprion_percula
ENSPEMG00000006521	-	89	81.564	ENSATEG00000004198	denr	91	82.123	Anabas_testudineus
ENSPEMG00000006521	-	100	89.899	ENSAPLG00000003750	DENR	99	89.899	Anas_platyrhynchos
ENSPEMG00000006521	-	97	90.155	ENSACAG00000016012	DENR	98	90.155	Anolis_carolinensis
ENSPEMG00000006521	-	100	76.263	ENSANAG00000011753	-	99	76.263	Aotus_nancymaae
ENSPEMG00000006521	-	100	97.475	ENSANAG00000033479	-	100	97.475	Aotus_nancymaae
ENSPEMG00000006521	-	100	76.263	ENSACLG00000024786	denr	100	76.263	Astatotilapia_calliptera
ENSPEMG00000006521	-	91	77.838	ENSAMXG00000019387	denr	92	81.622	Astyanax_mexicanus
ENSPEMG00000006521	-	100	94.949	ENSBTAG00000032433	DENR	100	94.949	Bos_taurus
ENSPEMG00000006521	-	100	94.949	ENSBTAG00000049723	DENR	100	94.949	Bos_taurus
ENSPEMG00000006521	-	87	44.767	WBGene00012932	Y47D3A.21	89	44.767	Caenorhabditis_elegans
ENSPEMG00000006521	-	78	85.161	ENSCJAG00000042372	-	95	85.161	Callithrix_jacchus
ENSPEMG00000006521	-	100	97.475	ENSCJAG00000020488	DENR	100	97.475	Callithrix_jacchus
ENSPEMG00000006521	-	100	94.949	ENSCAFG00000032380	DENR	72	94.949	Canis_familiaris
ENSPEMG00000006521	-	100	94.949	ENSCAFG00020016334	DENR	100	94.949	Canis_lupus_dingo
ENSPEMG00000006521	-	100	94.949	ENSCHIG00000025489	DENR	100	94.949	Capra_hircus
ENSPEMG00000006521	-	100	97.475	ENSTSYG00000028003	-	100	97.475	Carlito_syrichta
ENSPEMG00000006521	-	100	94.444	ENSTSYG00000035451	-	100	94.444	Carlito_syrichta
ENSPEMG00000006521	-	82	95.062	ENSCAPG00000002873	DENR	100	95.062	Cavia_aperea
ENSPEMG00000006521	-	100	94.949	ENSCPOG00000031356	DENR	100	94.949	Cavia_porcellus
ENSPEMG00000006521	-	100	81.818	ENSCCAG00000026516	-	100	79.798	Cebus_capucinus
ENSPEMG00000006521	-	99	79.188	ENSCCAG00000033248	-	100	80.203	Cebus_capucinus
ENSPEMG00000006521	-	100	97.980	ENSCATG00000032375	-	100	97.980	Cercocebus_atys
ENSPEMG00000006521	-	100	93.434	ENSCLAG00000014586	DENR	100	93.434	Chinchilla_lanigera
ENSPEMG00000006521	-	77	98.684	ENSCSAG00000002095	DENR	100	98.684	Chlorocebus_sabaeus
ENSPEMG00000006521	-	100	78.894	ENSCHOG00000011505	DENR	100	78.894	Choloepus_hoffmanni
ENSPEMG00000006521	-	100	90.404	ENSCPBG00000026018	DENR	100	90.404	Chrysemys_picta_bellii
ENSPEMG00000006521	-	87	54.598	ENSCING00000022096	-	85	54.598	Ciona_intestinalis
ENSPEMG00000006521	-	87	51.149	ENSCSAVG00000008066	-	95	47.938	Ciona_savignyi
ENSPEMG00000006521	-	100	96.465	ENSCGRG00001022427	Denr	100	96.465	Cricetulus_griseus_chok1gshd
ENSPEMG00000006521	-	100	96.465	ENSCGRG00000014376	Denr	100	96.465	Cricetulus_griseus_crigri
ENSPEMG00000006521	-	100	77.612	ENSCSEG00000012090	denr	100	77.612	Cynoglossus_semilaevis
ENSPEMG00000006521	-	100	78.607	ENSCVAG00000006732	denr	100	78.283	Cyprinodon_variegatus
ENSPEMG00000006521	-	91	77.083	ENSDARG00000037229	denr	92	78.646	Danio_rerio
ENSPEMG00000006521	-	100	92.424	ENSDNOG00000036413	-	100	92.424	Dasypus_novemcinctus
ENSPEMG00000006521	-	77	98.026	ENSDNOG00000001447	DENR	100	98.026	Dasypus_novemcinctus
ENSPEMG00000006521	-	87	50.289	FBgn0030802	DENR	87	50.289	Drosophila_melanogaster
ENSPEMG00000006521	-	100	74.874	ENSETEG00000013029	DENR	100	74.874	Echinops_telfairi
ENSPEMG00000006521	-	100	95.455	ENSEASG00005012513	DENR	100	95.455	Equus_asinus_asinus
ENSPEMG00000006521	-	100	95.455	ENSECAG00000021824	DENR	72	95.455	Equus_caballus
ENSPEMG00000006521	-	97	77.041	ENSELUG00000002656	denr	97	77.041	Esox_lucius
ENSPEMG00000006521	-	100	94.444	ENSFCAG00000006126	DENR	100	94.444	Felis_catus
ENSPEMG00000006521	-	100	86.000	ENSFALG00000009235	DENR	100	88.500	Ficedula_albicollis
ENSPEMG00000006521	-	100	75.253	ENSFDAG00000018403	-	100	75.253	Fukomys_damarensis
ENSPEMG00000006521	-	100	94.949	ENSFDAG00000016899	-	100	94.949	Fukomys_damarensis
ENSPEMG00000006521	-	92	82.796	ENSFHEG00000007729	denr	94	83.333	Fundulus_heteroclitus
ENSPEMG00000006521	-	97	76.923	ENSGMOG00000017892	denr	97	77.949	Gadus_morhua
ENSPEMG00000006521	-	100	89.899	ENSGALG00000003795	DENR	100	89.899	Gallus_gallus
ENSPEMG00000006521	-	100	76.884	ENSGAFG00000004297	denr	100	76.884	Gambusia_affinis
ENSPEMG00000006521	-	100	75.622	ENSGACG00000015614	denr	100	76.119	Gasterosteus_aculeatus
ENSPEMG00000006521	-	100	90.909	ENSGAGG00000023819	DENR	100	90.909	Gopherus_agassizii
ENSPEMG00000006521	-	100	97.980	ENSGGOG00000005562	DENR	100	97.980	Gorilla_gorilla
ENSPEMG00000006521	-	100	77.612	ENSHBUG00000011606	denr	100	77.612	Haplochromis_burtoni
ENSPEMG00000006521	-	100	94.949	ENSHGLG00000009606	DENR	100	94.949	Heterocephalus_glaber_female
ENSPEMG00000006521	-	100	94.949	ENSHGLG00100019201	DENR	100	94.949	Heterocephalus_glaber_male
ENSPEMG00000006521	-	88	82.222	ENSHCOG00000003310	denr	92	82.222	Hippocampus_comes
ENSPEMG00000006521	-	100	75.238	ENSIPUG00000016199	denr	100	75.238	Ictalurus_punctatus
ENSPEMG00000006521	-	100	96.970	ENSSTOG00000014128	DENR	100	96.970	Ictidomys_tridecemlineatus
ENSPEMG00000006521	-	100	89.394	ENSJJAG00000008721	-	100	89.394	Jaculus_jaculus
ENSPEMG00000006521	-	100	95.960	ENSJJAG00000012558	-	100	95.960	Jaculus_jaculus
ENSPEMG00000006521	-	79	93.082	ENSJJAG00000013822	-	92	93.082	Jaculus_jaculus
ENSPEMG00000006521	-	91	83.516	ENSKMAG00000008452	denr	99	80.208	Kryptolebias_marmoratus
ENSPEMG00000006521	-	88	84.270	ENSLBEG00000021674	denr	100	77.114	Labrus_bergylta
ENSPEMG00000006521	-	65	86.719	ENSLACG00000022178	DENR	96	86.719	Latimeria_chalumnae
ENSPEMG00000006521	-	97	82.902	ENSLOCG00000005501	denr	100	81.313	Lepisosteus_oculatus
ENSPEMG00000006521	-	100	92.500	ENSLAFG00000031728	DENR	100	92.500	Loxodonta_africana
ENSPEMG00000006521	-	100	97.980	ENSMFAG00000038312	DENR	100	97.980	Macaca_fascicularis
ENSPEMG00000006521	-	100	97.980	ENSMMUG00000046801	DENR	100	97.980	Macaca_mulatta
ENSPEMG00000006521	-	79	75.159	ENSMNEG00000030944	-	99	71.066	Macaca_nemestrina
ENSPEMG00000006521	-	100	97.980	ENSMNEG00000034844	-	100	97.980	Macaca_nemestrina
ENSPEMG00000006521	-	100	97.980	ENSMLEG00000032214	DENR	100	97.980	Mandrillus_leucophaeus
ENSPEMG00000006521	-	91	81.768	ENSMAMG00000011386	denr	100	76.768	Mastacembelus_armatus
ENSPEMG00000006521	-	100	76.263	ENSMZEG00005007982	denr	100	76.263	Maylandia_zebra
ENSPEMG00000006521	-	100	89.899	ENSMGAG00000003720	DENR	99	89.899	Meleagris_gallopavo
ENSPEMG00000006521	-	100	84.848	ENSMAUG00000020940	Denr	100	84.848	Mesocricetus_auratus
ENSPEMG00000006521	-	100	95.960	ENSMICG00000046263	DENR	100	95.960	Microcebus_murinus
ENSPEMG00000006521	-	100	98.485	ENSMOCG00000019231	Denr	100	98.485	Microtus_ochrogaster
ENSPEMG00000006521	-	88	79.429	ENSMMOG00000009357	denr	89	79.429	Mola_mola
ENSPEMG00000006521	-	100	91.414	ENSMODG00000012302	DENR	100	91.414	Monodelphis_domestica
ENSPEMG00000006521	-	91	83.978	ENSMALG00000018416	denr	100	78.788	Monopterus_albus
ENSPEMG00000006521	-	100	96.465	MGP_CAROLIEiJ_G0027737	Denr	100	96.465	Mus_caroli
ENSPEMG00000006521	-	100	96.465	ENSMUSG00000023106	Denr	100	96.465	Mus_musculus
ENSPEMG00000006521	-	100	96.465	MGP_PahariEiJ_G0024317	Denr	100	96.465	Mus_pahari
ENSPEMG00000006521	-	100	96.465	MGP_SPRETEiJ_G0028735	Denr	100	96.465	Mus_spretus
ENSPEMG00000006521	-	100	93.500	ENSMPUG00000001826	DENR	73	93.500	Mustela_putorius_furo
ENSPEMG00000006521	-	100	93.000	ENSMLUG00000002088	DENR	100	93.000	Myotis_lucifugus
ENSPEMG00000006521	-	100	96.970	ENSNGAG00000013775	Denr	100	96.970	Nannospalax_galili
ENSPEMG00000006521	-	100	78.788	ENSNBRG00000018898	denr	100	78.788	Neolamprologus_brichardi
ENSPEMG00000006521	-	100	97.980	ENSNLEG00000029880	DENR	100	97.980	Nomascus_leucogenys
ENSPEMG00000006521	-	100	77.778	ENSODEG00000005378	-	100	81.818	Octodon_degus
ENSPEMG00000006521	-	98	91.327	ENSODEG00000009408	-	97	91.327	Octodon_degus
ENSPEMG00000006521	-	100	68.182	ENSODEG00000006563	-	100	68.182	Octodon_degus
ENSPEMG00000006521	-	96	79.793	ENSONIG00000015319	denr	96	79.793	Oreochromis_niloticus
ENSPEMG00000006521	-	100	91.500	ENSOANG00000011417	-	100	91.500	Ornithorhynchus_anatinus
ENSPEMG00000006521	-	100	95.455	ENSOCUG00000008150	-	100	95.455	Oryctolagus_cuniculus
ENSPEMG00000006521	-	96	82.632	ENSOCUG00000027291	-	100	81.053	Oryctolagus_cuniculus
ENSPEMG00000006521	-	93	78.804	ENSORLG00000001495	denr	96	79.348	Oryzias_latipes
ENSPEMG00000006521	-	93	78.804	ENSORLG00020015485	denr	96	79.348	Oryzias_latipes_hni
ENSPEMG00000006521	-	93	78.378	ENSORLG00015002890	denr	96	78.919	Oryzias_latipes_hsok
ENSPEMG00000006521	-	93	78.804	ENSOMEG00000021836	denr	96	79.348	Oryzias_melastigma
ENSPEMG00000006521	-	100	97.475	ENSOGAG00000012426	DENR	100	97.475	Otolemur_garnettii
ENSPEMG00000006521	-	100	92.611	ENSOARG00000008511	DENR	99	92.611	Ovis_aries
ENSPEMG00000006521	-	100	92.233	ENSPPAG00000031425	DENR	100	92.233	Pan_paniscus
ENSPEMG00000006521	-	100	63.366	ENSPPRG00000020005	-	100	65.657	Panthera_pardus
ENSPEMG00000006521	-	100	94.444	ENSPPRG00000009664	-	100	94.444	Panthera_pardus
ENSPEMG00000006521	-	100	93.939	ENSPTIG00000014761	-	100	93.939	Panthera_tigris_altaica
ENSPEMG00000006521	-	93	74.054	ENSPTIG00000021643	-	90	80.473	Panthera_tigris_altaica
ENSPEMG00000006521	-	100	97.980	ENSPTRG00000005584	DENR	100	97.980	Pan_troglodytes
ENSPEMG00000006521	-	82	98.773	ENSPANG00000035364	-	100	98.773	Papio_anubis
ENSPEMG00000006521	-	100	97.980	ENSPANG00000030074	-	100	97.980	Papio_anubis
ENSPEMG00000006521	-	100	77.778	ENSPKIG00000001107	denr	100	75.377	Paramormyrops_kingsleyae
ENSPEMG00000006521	-	100	91.414	ENSPSIG00000008249	DENR	95	91.414	Pelodiscus_sinensis
ENSPEMG00000006521	-	74	82.192	ENSPMGG00000017214	denr	61	82.192	Periophthalmus_magnuspinnatus
ENSPEMG00000006521	-	85	70.349	ENSPMAG00000008589	denr	91	70.930	Petromyzon_marinus
ENSPEMG00000006521	-	100	91.414	ENSPCIG00000022523	DENR	100	91.414	Phascolarctos_cinereus
ENSPEMG00000006521	-	100	80.808	ENSPFOG00000023419	denr	100	80.808	Poecilia_formosa
ENSPEMG00000006521	-	100	80.808	ENSPLAG00000014807	denr	100	80.808	Poecilia_latipinna
ENSPEMG00000006521	-	100	75.490	ENSPMEG00000020699	denr	100	75.490	Poecilia_mexicana
ENSPEMG00000006521	-	100	80.808	ENSPREG00000016795	denr	100	80.808	Poecilia_reticulata
ENSPEMG00000006521	-	100	89.447	ENSPCAG00000012039	DENR	100	89.447	Procavia_capensis
ENSPEMG00000006521	-	100	96.465	ENSPCOG00000015933	DENR	100	96.465	Propithecus_coquereli
ENSPEMG00000006521	-	100	92.965	ENSPVAG00000001291	DENR	100	92.965	Pteropus_vampyrus
ENSPEMG00000006521	-	100	78.788	ENSPNYG00000003833	denr	100	78.788	Pundamilia_nyererei
ENSPEMG00000006521	-	91	80.435	ENSPNAG00000021662	denr	92	80.435	Pygocentrus_nattereri
ENSPEMG00000006521	-	100	91.414	ENSRNOG00000001106	Denr	100	91.414	Rattus_norvegicus
ENSPEMG00000006521	-	100	78.283	ENSRBIG00000041357	DENR	100	77.778	Rhinopithecus_bieti
ENSPEMG00000006521	-	100	97.980	ENSRROG00000044446	DENR	100	97.980	Rhinopithecus_roxellana
ENSPEMG00000006521	-	78	31.395	YJR014W	TMA22	85	31.395	Saccharomyces_cerevisiae
ENSPEMG00000006521	-	99	67.005	ENSSBOG00000024171	-	100	67.000	Saimiri_boliviensis_boliviensis
ENSPEMG00000006521	-	78	95.455	ENSSBOG00000030149	-	87	95.455	Saimiri_boliviensis_boliviensis
ENSPEMG00000006521	-	99	89.899	ENSSHAG00000012064	DENR	99	89.899	Sarcophilus_harrisii
ENSPEMG00000006521	-	100	79.293	ENSSFOG00015018494	denr	100	79.293	Scleropages_formosus
ENSPEMG00000006521	-	88	82.286	ENSSMAG00000010563	denr	96	75.758	Scophthalmus_maximus
ENSPEMG00000006521	-	100	77.114	ENSSDUG00000023551	denr	100	77.114	Seriola_dumerili
ENSPEMG00000006521	-	100	76.617	ENSSLDG00000011430	denr	100	76.617	Seriola_lalandi_dorsalis
ENSPEMG00000006521	-	79	99.359	ENSSARG00000004446	DENR	100	99.359	Sorex_araneus
ENSPEMG00000006521	-	100	93.434	ENSSPUG00000012205	DENR	100	93.434	Sphenodon_punctatus
ENSPEMG00000006521	-	100	78.109	ENSSPAG00000019529	denr	100	78.109	Stegastes_partitus
ENSPEMG00000006521	-	100	94.444	ENSSSCG00000009788	-	100	94.444	Sus_scrofa
ENSPEMG00000006521	-	100	83.333	ENSTGUG00000005674	DENR	100	83.333	Taeniopygia_guttata
ENSPEMG00000006521	-	91	77.901	ENSTRUG00000020621	denr	91	77.901	Takifugu_rubripes
ENSPEMG00000006521	-	91	82.873	ENSTNIG00000013510	denr	91	82.873	Tetraodon_nigroviridis
ENSPEMG00000006521	-	100	76.884	ENSTTRG00000015856	DENR	100	76.884	Tursiops_truncatus
ENSPEMG00000006521	-	100	56.784	ENSUAMG00000011200	-	100	56.784	Ursus_americanus
ENSPEMG00000006521	-	100	94.949	ENSUAMG00000003667	-	100	94.949	Ursus_americanus
ENSPEMG00000006521	-	100	56.784	ENSUMAG00000023866	-	100	56.784	Ursus_maritimus
ENSPEMG00000006521	-	100	94.949	ENSUMAG00000005166	-	100	94.949	Ursus_maritimus
ENSPEMG00000006521	-	100	72.683	ENSVPAG00000011472	DENR	100	72.683	Vicugna_pacos
ENSPEMG00000006521	-	100	94.949	ENSVVUG00000028097	DENR	72	94.949	Vulpes_vulpes
ENSPEMG00000006521	-	100	84.848	ENSXETG00000005791	denr	99	84.848	Xenopus_tropicalis
ENSPEMG00000006521	-	100	74.242	ENSXCOG00000017611	denr	100	74.242	Xiphophorus_couchianus
ENSPEMG00000006521	-	100	80.303	ENSXMAG00000019247	denr	100	80.303	Xiphophorus_maculatus