EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000006639 (Gene tree)
Gene ID: 102914614
Gene Symbol: Vars
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 14493 bases
Position: chrKI616225.1:369647-384139
Accession: 102914614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000004441	tRNA-synt_1g	PF09334.11	4.2e-11	1	1
ENSPEMP00000004434	tRNA-synt_1g	PF09334.11	4.3e-11	1	1
ENSPEMP00000004441	Anticodon_1	PF08264.13	2e-32	1	1
ENSPEMP00000004434	Anticodon_1	PF08264.13	2.1e-32	1	1
ENSPEMP00000004434	tRNA-synt_1	PF00133.22	6.7e-202	1	1
ENSPEMP00000004441	tRNA-synt_1	PF00133.22	5.4e-194	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000008039	-	3989	XM_006995584	ENSPEMP00000004434	1264 (aa)	XP_006995646	UPI00042AB973
ENSPEMT00000008053	-	3741	-	ENSPEMP00000004441	1246 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000006639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000006639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000006639	Vars	81	50.920	ENSPEMG00000014691	Vars2	92	52.371

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000006639	Vars	100	93.671	ENSG00000204394	VARS	100	93.671	Homo_sapiens
ENSPEMG00000006639	Vars	98	64.555	ENSAPOG00000020691	vars	99	64.234	Acanthochromis_polyacanthus
ENSPEMG00000006639	Vars	98	64.555	ENSAPOG00000020921	vars	99	64.234	Acanthochromis_polyacanthus
ENSPEMG00000006639	Vars	100	93.518	ENSAMEG00000006417	VARS	100	93.518	Ailuropoda_melanoleuca
ENSPEMG00000006639	Vars	100	65.333	ENSACIG00000013752	vars	100	65.016	Amphilophus_citrinellus
ENSPEMG00000006639	Vars	100	64.391	ENSAOCG00000002447	vars	100	64.044	Amphiprion_ocellaris
ENSPEMG00000006639	Vars	100	64.469	ENSAPEG00000010638	vars	99	64.408	Amphiprion_percula
ENSPEMG00000006639	Vars	100	64.145	ENSATEG00000020219	vars	100	63.830	Anabas_testudineus
ENSPEMG00000006639	Vars	90	70.052	ENSACAG00000029133	-	99	70.512	Anolis_carolinensis
ENSPEMG00000006639	Vars	100	93.434	ENSANAG00000015453	VARS	100	93.434	Aotus_nancymaae
ENSPEMG00000006639	Vars	100	64.574	ENSACLG00000025699	vars	97	64.258	Astatotilapia_calliptera
ENSPEMG00000006639	Vars	94	66.389	ENSAMXG00000017716	vars	95	66.389	Astyanax_mexicanus
ENSPEMG00000006639	Vars	100	93.671	ENSBTAG00000005631	VARS	100	93.671	Bos_taurus
ENSPEMG00000006639	Vars	100	93.434	ENSCJAG00000002604	VARS	100	93.434	Callithrix_jacchus
ENSPEMG00000006639	Vars	100	92.801	ENSCAFG00000000636	VARS	100	92.801	Canis_familiaris
ENSPEMG00000006639	Vars	94	93.074	ENSCAFG00020020790	VARS	96	93.074	Canis_lupus_dingo
ENSPEMG00000006639	Vars	100	93.829	ENSCHIG00000011008	VARS	100	93.829	Capra_hircus
ENSPEMG00000006639	Vars	100	94.146	ENSTSYG00000001567	VARS	100	94.146	Carlito_syrichta
ENSPEMG00000006639	Vars	91	90.830	ENSCAPG00000013736	VARS	99	90.830	Cavia_aperea
ENSPEMG00000006639	Vars	100	91.772	ENSCPOG00000000870	VARS	100	91.772	Cavia_porcellus
ENSPEMG00000006639	Vars	100	93.434	ENSCCAG00000035656	VARS	100	93.781	Cebus_capucinus
ENSPEMG00000006639	Vars	100	93.592	ENSCATG00000022394	VARS	100	93.592	Cercocebus_atys
ENSPEMG00000006639	Vars	93	87.054	ENSCLAG00000009470	VARS	96	87.054	Chinchilla_lanigera
ENSPEMG00000006639	Vars	100	93.908	ENSCSAG00000008784	VARS	100	93.908	Chlorocebus_sabaeus
ENSPEMG00000006639	Vars	77	74.435	ENSCPBG00000007943	VARS	96	74.333	Chrysemys_picta_bellii
ENSPEMG00000006639	Vars	100	93.908	ENSCANG00000033570	VARS	100	93.908	Colobus_angolensis_palliatus
ENSPEMG00000006639	Vars	100	96.915	ENSCGRG00001005686	Vars	100	96.915	Cricetulus_griseus_chok1gshd
ENSPEMG00000006639	Vars	92	91.541	ENSCGRG00000013352	Vars	78	91.541	Cricetulus_griseus_crigri
ENSPEMG00000006639	Vars	100	64.190	ENSCSEG00000019652	vars	100	64.032	Cynoglossus_semilaevis
ENSPEMG00000006639	Vars	100	64.880	ENSCVAG00000022398	vars	100	64.802	Cyprinodon_variegatus
ENSPEMG00000006639	Vars	100	65.012	ENSDARG00000044575	vars	100	65.163	Danio_rerio
ENSPEMG00000006639	Vars	83	94.253	ENSDORG00000016433	Vars	93	94.253	Dipodomys_ordii
ENSPEMG00000006639	Vars	69	86.842	ENSETEG00000003824	VARS	77	87.117	Echinops_telfairi
ENSPEMG00000006639	Vars	57	62.637	ENSEBUG00000004637	vars	100	62.912	Eptatretus_burgeri
ENSPEMG00000006639	Vars	50	71.558	ENSEBUG00000007086	vars	84	70.506	Eptatretus_burgeri
ENSPEMG00000006639	Vars	100	94.541	ENSEASG00005015673	VARS	100	94.541	Equus_asinus_asinus
ENSPEMG00000006639	Vars	100	93.755	ENSECAG00000014620	VARS	100	94.071	Equus_caballus
ENSPEMG00000006639	Vars	78	91.349	ENSEEUG00000004116	VARS	80	91.349	Erinaceus_europaeus
ENSPEMG00000006639	Vars	100	64.302	ENSELUG00000006550	vars	97	64.071	Esox_lucius
ENSPEMG00000006639	Vars	100	93.196	ENSFCAG00000004510	VARS	100	93.196	Felis_catus
ENSPEMG00000006639	Vars	85	89.852	ENSFDAG00000011401	VARS	100	89.852	Fukomys_damarensis
ENSPEMG00000006639	Vars	100	65.190	ENSFHEG00000010672	vars	100	65.113	Fundulus_heteroclitus
ENSPEMG00000006639	Vars	92	66.583	ENSGMOG00000014908	vars	97	66.417	Gadus_morhua
ENSPEMG00000006639	Vars	100	65.525	ENSGAFG00000021630	vars	100	65.447	Gambusia_affinis
ENSPEMG00000006639	Vars	92	65.831	ENSGACG00000009601	vars	98	65.417	Gasterosteus_aculeatus
ENSPEMG00000006639	Vars	50	65.087	ENSGAGG00000006508	-	91	64.455	Gopherus_agassizii
ENSPEMG00000006639	Vars	100	93.750	ENSGGOG00000011364	VARS	100	93.750	Gorilla_gorilla
ENSPEMG00000006639	Vars	100	64.574	ENSHBUG00000017151	vars	97	64.258	Haplochromis_burtoni
ENSPEMG00000006639	Vars	100	91.297	ENSHGLG00000011646	VARS	100	90.981	Heterocephalus_glaber_female
ENSPEMG00000006639	Vars	93	83.721	ENSHGLG00100018062	VARS	100	83.721	Heterocephalus_glaber_male
ENSPEMG00000006639	Vars	99	64.884	ENSHCOG00000012198	vars	99	64.747	Hippocampus_comes
ENSPEMG00000006639	Vars	100	64.981	ENSIPUG00000005218	vars	100	64.981	Ictalurus_punctatus
ENSPEMG00000006639	Vars	100	94.229	ENSSTOG00000013112	VARS	100	94.229	Ictidomys_tridecemlineatus
ENSPEMG00000006639	Vars	100	92.326	ENSJJAG00000019749	-	100	91.693	Jaculus_jaculus
ENSPEMG00000006639	Vars	100	72.785	ENSJJAG00000015343	-	99	73.735	Jaculus_jaculus
ENSPEMG00000006639	Vars	100	65.245	ENSKMAG00000009455	vars	100	64.929	Kryptolebias_marmoratus
ENSPEMG00000006639	Vars	100	64.534	ENSLBEG00000010341	vars	100	64.376	Labrus_bergylta
ENSPEMG00000006639	Vars	94	62.829	ENSLACG00000015232	VARS	99	63.240	Latimeria_chalumnae
ENSPEMG00000006639	Vars	100	67.371	ENSLOCG00000004240	vars	100	67.214	Lepisosteus_oculatus
ENSPEMG00000006639	Vars	100	92.326	ENSLAFG00000023090	VARS	100	91.930	Loxodonta_africana
ENSPEMG00000006639	Vars	100	93.908	ENSMFAG00000001032	VARS	100	93.908	Macaca_fascicularis
ENSPEMG00000006639	Vars	100	93.908	ENSMMUG00000006828	VARS	100	93.908	Macaca_mulatta
ENSPEMG00000006639	Vars	100	93.908	ENSMNEG00000042072	VARS	100	93.908	Macaca_nemestrina
ENSPEMG00000006639	Vars	100	93.750	ENSMLEG00000039307	VARS	100	93.750	Mandrillus_leucophaeus
ENSPEMG00000006639	Vars	100	64.534	ENSMAMG00000003949	vars	100	64.536	Mastacembelus_armatus
ENSPEMG00000006639	Vars	100	64.651	ENSMZEG00005018327	vars	100	64.167	Maylandia_zebra
ENSPEMG00000006639	Vars	100	96.123	ENSMAUG00000006715	Vars	100	96.123	Mesocricetus_auratus
ENSPEMG00000006639	Vars	100	93.038	ENSMICG00000003548	VARS	100	93.284	Microcebus_murinus
ENSPEMG00000006639	Vars	100	93.671	ENSMOCG00000015404	Vars	100	93.354	Microtus_ochrogaster
ENSPEMG00000006639	Vars	100	63.915	ENSMMOG00000015801	vars	100	63.758	Mola_mola
ENSPEMG00000006639	Vars	100	86.076	ENSMODG00000015204	-	100	86.076	Monodelphis_domestica
ENSPEMG00000006639	Vars	99	64.756	ENSMALG00000022532	vars	99	64.441	Monopterus_albus
ENSPEMG00000006639	Vars	100	96.361	MGP_CAROLIEiJ_G0021491	Vars	100	96.361	Mus_caroli
ENSPEMG00000006639	Vars	100	96.519	ENSMUSG00000007029	Vars	100	96.519	Mus_musculus
ENSPEMG00000006639	Vars	100	95.570	MGP_PahariEiJ_G0020486	Vars	100	95.174	Mus_pahari
ENSPEMG00000006639	Vars	100	96.598	MGP_SPRETEiJ_G0022396	Vars	100	96.598	Mus_spretus
ENSPEMG00000006639	Vars	100	93.354	ENSMPUG00000010821	VARS	100	93.354	Mustela_putorius_furo
ENSPEMG00000006639	Vars	78	92.713	ENSMLUG00000013126	VARS	100	93.117	Myotis_lucifugus
ENSPEMG00000006639	Vars	100	93.987	ENSNGAG00000012151	Vars	100	94.304	Nannospalax_galili
ENSPEMG00000006639	Vars	100	64.341	ENSNBRG00000020520	vars	100	64.025	Neolamprologus_brichardi
ENSPEMG00000006639	Vars	100	93.117	ENSNLEG00000006351	VARS	100	93.117	Nomascus_leucogenys
ENSPEMG00000006639	Vars	100	82.991	ENSMEUG00000011378	VARS	100	82.991	Notamacropus_eugenii
ENSPEMG00000006639	Vars	100	93.829	ENSOPRG00000003607	VARS	100	93.829	Ochotona_princeps
ENSPEMG00000006639	Vars	100	91.693	ENSODEG00000017681	VARS	100	91.139	Octodon_degus
ENSPEMG00000006639	Vars	100	65.129	ENSONIG00000013064	vars	99	67.388	Oreochromis_niloticus
ENSPEMG00000006639	Vars	77	78.954	ENSOANG00000005400	VARS	98	78.121	Ornithorhynchus_anatinus
ENSPEMG00000006639	Vars	100	90.600	ENSOCUG00000022463	VARS	100	90.758	Oryctolagus_cuniculus
ENSPEMG00000006639	Vars	100	64.950	ENSORLG00000013063	vars	100	64.892	Oryzias_latipes
ENSPEMG00000006639	Vars	100	65.426	ENSORLG00020003504	vars	100	65.349	Oryzias_latipes_hni
ENSPEMG00000006639	Vars	100	65.322	ENSORLG00015009001	vars	100	65.167	Oryzias_latipes_hsok
ENSPEMG00000006639	Vars	100	64.969	ENSOMEG00000015016	vars	100	64.892	Oryzias_melastigma
ENSPEMG00000006639	Vars	100	93.275	ENSOGAG00000007515	VARS	100	93.275	Otolemur_garnettii
ENSPEMG00000006639	Vars	50	89.888	ENSOARG00000004625	-	91	89.888	Ovis_aries
ENSPEMG00000006639	Vars	100	93.908	ENSPPAG00000034012	VARS	100	93.908	Pan_paniscus
ENSPEMG00000006639	Vars	100	93.275	ENSPPRG00000014855	VARS	100	93.275	Panthera_pardus
ENSPEMG00000006639	Vars	85	93.773	ENSPTIG00000010462	VARS	95	93.773	Panthera_tigris_altaica
ENSPEMG00000006639	Vars	100	93.987	ENSPTRG00000017985	VARS	100	93.987	Pan_troglodytes
ENSPEMG00000006639	Vars	100	92.350	ENSPANG00000014565	VARS	100	92.350	Papio_anubis
ENSPEMG00000006639	Vars	100	63.475	ENSPKIG00000016304	vars	100	63.398	Paramormyrops_kingsleyae
ENSPEMG00000006639	Vars	100	65.536	ENSPMGG00000023909	vars	100	65.379	Periophthalmus_magnuspinnatus
ENSPEMG00000006639	Vars	100	85.839	ENSPCIG00000018553	VARS	100	85.839	Phascolarctos_cinereus
ENSPEMG00000006639	Vars	100	65.370	ENSPFOG00000015690	vars	100	65.292	Poecilia_formosa
ENSPEMG00000006639	Vars	100	65.932	ENSPLAG00000009590	vars	100	65.618	Poecilia_latipinna
ENSPEMG00000006639	Vars	100	65.370	ENSPMEG00000004708	vars	100	65.292	Poecilia_mexicana
ENSPEMG00000006639	Vars	100	63.780	ENSPREG00000013264	vars	96	72.802	Poecilia_reticulata
ENSPEMG00000006639	Vars	100	92.009	ENSPPYG00000016460	VARS	100	92.009	Pongo_abelii
ENSPEMG00000006639	Vars	86	91.203	ENSPCAG00000013565	VARS	86	91.203	Procavia_capensis
ENSPEMG00000006639	Vars	100	93.597	ENSPCOG00000010942	VARS	100	93.913	Propithecus_coquereli
ENSPEMG00000006639	Vars	100	90.190	ENSPVAG00000012403	VARS	100	90.190	Pteropus_vampyrus
ENSPEMG00000006639	Vars	100	64.574	ENSPNYG00000022511	vars	100	64.258	Pundamilia_nyererei
ENSPEMG00000006639	Vars	100	65.322	ENSPNAG00000020962	vars	100	65.167	Pygocentrus_nattereri
ENSPEMG00000006639	Vars	100	96.203	ENSRNOG00000000867	Vars	100	96.203	Rattus_norvegicus
ENSPEMG00000006639	Vars	100	93.829	ENSRBIG00000041669	VARS	100	93.829	Rhinopithecus_bieti
ENSPEMG00000006639	Vars	100	93.829	ENSRROG00000045490	VARS	100	93.829	Rhinopithecus_roxellana
ENSPEMG00000006639	Vars	100	93.354	ENSSBOG00000035402	VARS	100	93.354	Saimiri_boliviensis_boliviensis
ENSPEMG00000006639	Vars	100	81.147	ENSSHAG00000006937	VARS	100	81.383	Sarcophilus_harrisii
ENSPEMG00000006639	Vars	100	64.865	ENSSFOG00015014272	vars	100	64.633	Scleropages_formosus
ENSPEMG00000006639	Vars	100	63.467	ENSSMAG00000009596	vars	99	63.305	Scophthalmus_maximus
ENSPEMG00000006639	Vars	100	64.396	ENSSDUG00000014177	vars	100	64.081	Seriola_dumerili
ENSPEMG00000006639	Vars	100	64.396	ENSSLDG00000025316	vars	100	64.158	Seriola_lalandi_dorsalis
ENSPEMG00000006639	Vars	100	64.724	ENSSPAG00000017068	vars	100	64.486	Stegastes_partitus
ENSPEMG00000006639	Vars	100	92.806	ENSSSCG00000038950	VARS	100	93.123	Sus_scrofa
ENSPEMG00000006639	Vars	82	64.334	ENSTRUG00000012307	vars	98	64.279	Takifugu_rubripes
ENSPEMG00000006639	Vars	100	64.816	ENSTNIG00000008011	vars	100	64.577	Tetraodon_nigroviridis
ENSPEMG00000006639	Vars	54	95.880	ENSTBEG00000004728	-	60	95.880	Tupaia_belangeri
ENSPEMG00000006639	Vars	100	85.285	ENSTTRG00000014128	VARS	100	85.285	Tursiops_truncatus
ENSPEMG00000006639	Vars	100	89.780	ENSUAMG00000010424	VARS	100	89.780	Ursus_americanus
ENSPEMG00000006639	Vars	93	93.333	ENSUMAG00000013486	VARS	98	92.857	Ursus_maritimus
ENSPEMG00000006639	Vars	100	92.411	ENSVVUG00000021323	VARS	100	92.174	Vulpes_vulpes
ENSPEMG00000006639	Vars	96	63.379	ENSXETG00000024076	vars	98	62.540	Xenopus_tropicalis
ENSPEMG00000006639	Vars	100	65.566	ENSXCOG00000019172	vars	100	65.487	Xiphophorus_couchianus
ENSPEMG00000006639	Vars	100	65.370	ENSXMAG00000010927	vars	100	65.292	Xiphophorus_maculatus