EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPEMG00000006888 (Gene tree)
Gene ID: 102912898
Gene Symbol: Tarbp1
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 52036 bases
Position: chrKI615496.1:1389853-1441888
Accession: 102912898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000004604	SpoU_methylase	PF00588.19	3.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000008289	-	4509	XM_016001042	ENSPEMP00000004604	1502 (aa)	XP_015856528	-

Gene Model

Click here to download ENSPEMG00000006888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000006888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000006888	Tarbp1	99	77.231	ENSG00000059588	TARBP1	96	76.401	Homo_sapiens
ENSPEMG00000006888	Tarbp1	92	44.153	ENSAPOG00000016419	si:dkey-85a20.4	85	44.318	Acanthochromis_polyacanthus
ENSPEMG00000006888	Tarbp1	90	77.606	ENSAMEG00000003359	TARBP1	99	77.606	Ailuropoda_melanoleuca
ENSPEMG00000006888	Tarbp1	92	44.014	ENSATEG00000020266	si:dkey-85a20.4	85	44.085	Anabas_testudineus
ENSPEMG00000006888	Tarbp1	90	62.930	ENSAPLG00000007666	TARBP1	99	63.616	Anas_platyrhynchos
ENSPEMG00000006888	Tarbp1	98	54.071	ENSACAG00000001142	TARBP1	98	54.153	Anolis_carolinensis
ENSPEMG00000006888	Tarbp1	97	74.766	ENSANAG00000022031	TARBP1	99	70.191	Aotus_nancymaae
ENSPEMG00000006888	Tarbp1	99	74.393	ENSBTAG00000004517	TARBP1	96	77.973	Bos_taurus
ENSPEMG00000006888	Tarbp1	99	76.231	ENSCJAG00000018155	TARBP1	97	75.502	Callithrix_jacchus
ENSPEMG00000006888	Tarbp1	94	75.543	ENSCAFG00000011533	TARBP1	99	75.957	Canis_familiaris
ENSPEMG00000006888	Tarbp1	98	75.599	ENSCAFG00020027141	TARBP1	93	75.702	Canis_lupus_dingo
ENSPEMG00000006888	Tarbp1	99	73.750	ENSCHIG00000011437	TARBP1	96	73.750	Capra_hircus
ENSPEMG00000006888	Tarbp1	87	76.659	ENSTSYG00000010382	TARBP1	97	76.659	Carlito_syrichta
ENSPEMG00000006888	Tarbp1	85	69.599	ENSCAPG00000010831	TARBP1	99	69.678	Cavia_aperea
ENSPEMG00000006888	Tarbp1	99	76.977	ENSCPOG00000013995	TARBP1	99	77.048	Cavia_porcellus
ENSPEMG00000006888	Tarbp1	96	81.742	ENSCCAG00000037278	TARBP1	97	81.742	Cebus_capucinus
ENSPEMG00000006888	Tarbp1	99	76.582	ENSCATG00000011754	TARBP1	97	75.848	Cercocebus_atys
ENSPEMG00000006888	Tarbp1	89	78.440	ENSCLAG00000003655	TARBP1	99	78.517	Chinchilla_lanigera
ENSPEMG00000006888	Tarbp1	85	77.873	ENSCSAG00000010100	TARBP1	99	77.873	Chlorocebus_sabaeus
ENSPEMG00000006888	Tarbp1	93	60.661	ENSCPBG00000005587	TARBP1	98	61.122	Chrysemys_picta_bellii
ENSPEMG00000006888	Tarbp1	90	77.843	ENSCANG00000034343	TARBP1	99	77.843	Colobus_angolensis_palliatus
ENSPEMG00000006888	Tarbp1	100	86.962	ENSCGRG00001016690	Tarbp1	100	86.962	Cricetulus_griseus_chok1gshd
ENSPEMG00000006888	Tarbp1	100	89.362	ENSCGRG00000016893	Tarbp1	100	89.362	Cricetulus_griseus_crigri
ENSPEMG00000006888	Tarbp1	92	41.441	ENSCSEG00000005255	si:dkey-85a20.4	86	45.728	Cynoglossus_semilaevis
ENSPEMG00000006888	Tarbp1	91	46.513	ENSDARG00000079055	si:dkey-85a20.4	99	54.671	Danio_rerio
ENSPEMG00000006888	Tarbp1	99	74.431	ENSDNOG00000008637	TARBP1	96	74.431	Dasypus_novemcinctus
ENSPEMG00000006888	Tarbp1	86	74.730	ENSDORG00000007984	Tarbp1	100	74.730	Dipodomys_ordii
ENSPEMG00000006888	Tarbp1	100	77.219	ENSEASG00005000252	TARBP1	97	77.219	Equus_asinus_asinus
ENSPEMG00000006888	Tarbp1	100	76.955	ENSECAG00000023673	TARBP1	98	76.509	Equus_caballus
ENSPEMG00000006888	Tarbp1	91	44.429	ENSELUG00000012193	si:dkey-85a20.4	86	44.429	Esox_lucius
ENSPEMG00000006888	Tarbp1	100	71.992	ENSFCAG00000014183	TARBP1	95	72.005	Felis_catus
ENSPEMG00000006888	Tarbp1	86	63.929	ENSFALG00000013565	TARBP1	99	63.838	Ficedula_albicollis
ENSPEMG00000006888	Tarbp1	85	74.866	ENSFDAG00000001308	TARBP1	99	75.019	Fukomys_damarensis
ENSPEMG00000006888	Tarbp1	92	39.334	ENSFHEG00000007565	si:dkey-85a20.4	77	54.444	Fundulus_heteroclitus
ENSPEMG00000006888	Tarbp1	90	43.601	ENSGMOG00000004549	si:dkey-85a20.4	98	43.673	Gadus_morhua
ENSPEMG00000006888	Tarbp1	94	59.986	ENSGALG00000011000	TARBP1	99	59.986	Gallus_gallus
ENSPEMG00000006888	Tarbp1	92	44.071	ENSGAFG00000007387	si:dkey-85a20.4	85	44.017	Gambusia_affinis
ENSPEMG00000006888	Tarbp1	92	44.571	ENSGACG00000005865	si:dkey-85a20.4	99	44.571	Gasterosteus_aculeatus
ENSPEMG00000006888	Tarbp1	99	63.020	ENSGAGG00000012102	TARBP1	99	63.357	Gopherus_agassizii
ENSPEMG00000006888	Tarbp1	91	76.006	ENSGGOG00000022879	TARBP1	99	76.006	Gorilla_gorilla
ENSPEMG00000006888	Tarbp1	92	45.500	ENSHBUG00000008877	si:dkey-85a20.4	85	45.500	Haplochromis_burtoni
ENSPEMG00000006888	Tarbp1	99	77.660	ENSHGLG00000011592	TARBP1	99	77.731	Heterocephalus_glaber_female
ENSPEMG00000006888	Tarbp1	99	74.983	ENSHGLG00100015169	TARBP1	99	75.116	Heterocephalus_glaber_male
ENSPEMG00000006888	Tarbp1	91	43.369	ENSIPUG00000005249	si:dkey-85a20.4	83	43.369	Ictalurus_punctatus
ENSPEMG00000006888	Tarbp1	94	76.431	ENSSTOG00000032291	TARBP1	99	76.506	Ictidomys_tridecemlineatus
ENSPEMG00000006888	Tarbp1	99	74.035	ENSJJAG00000017840	Tarbp1	99	73.901	Jaculus_jaculus
ENSPEMG00000006888	Tarbp1	71	47.908	ENSKMAG00000017546	si:dkey-85a20.4	74	47.908	Kryptolebias_marmoratus
ENSPEMG00000006888	Tarbp1	71	48.868	ENSLBEG00000012132	si:dkey-85a20.4	79	48.868	Labrus_bergylta
ENSPEMG00000006888	Tarbp1	95	51.171	ENSLACG00000004337	TARBP1	88	51.171	Latimeria_chalumnae
ENSPEMG00000006888	Tarbp1	92	48.894	ENSLOCG00000016214	si:dkey-85a20.4	85	48.894	Lepisosteus_oculatus
ENSPEMG00000006888	Tarbp1	94	74.212	ENSLAFG00000011394	TARBP1	91	74.529	Loxodonta_africana
ENSPEMG00000006888	Tarbp1	99	74.209	ENSMFAG00000041068	TARBP1	97	73.747	Macaca_fascicularis
ENSPEMG00000006888	Tarbp1	99	74.280	ENSMMUG00000021703	TARBP1	97	73.182	Macaca_mulatta
ENSPEMG00000006888	Tarbp1	99	76.371	ENSMNEG00000045002	TARBP1	97	75.640	Macaca_nemestrina
ENSPEMG00000006888	Tarbp1	90	77.835	ENSMLEG00000044182	TARBP1	99	77.835	Mandrillus_leucophaeus
ENSPEMG00000006888	Tarbp1	92	44.358	ENSMAMG00000021760	si:dkey-85a20.4	86	44.429	Mastacembelus_armatus
ENSPEMG00000006888	Tarbp1	92	45.571	ENSMZEG00005005751	si:dkey-85a20.4	85	45.571	Maylandia_zebra
ENSPEMG00000006888	Tarbp1	100	85.570	ENSMAUG00000020968	Tarbp1	98	90.769	Mesocricetus_auratus
ENSPEMG00000006888	Tarbp1	99	69.011	ENSMICG00000015280	TARBP1	99	69.011	Microcebus_murinus
ENSPEMG00000006888	Tarbp1	100	89.643	ENSMOCG00000004128	Tarbp1	97	89.643	Microtus_ochrogaster
ENSPEMG00000006888	Tarbp1	91	43.977	ENSMMOG00000007795	si:dkey-85a20.4	85	43.977	Mola_mola
ENSPEMG00000006888	Tarbp1	99	67.132	ENSMODG00000008504	TARBP1	96	66.736	Monodelphis_domestica
ENSPEMG00000006888	Tarbp1	91	44.357	ENSMALG00000002916	si:dkey-85a20.4	85	44.254	Monopterus_albus
ENSPEMG00000006888	Tarbp1	99	88.702	MGP_CAROLIEiJ_G0031729	Tarbp1	99	88.702	Mus_caroli
ENSPEMG00000006888	Tarbp1	99	88.219	ENSMUSG00000090290	Tarbp1	99	88.219	Mus_musculus
ENSPEMG00000006888	Tarbp1	99	88.936	MGP_PahariEiJ_G0023326	Tarbp1	99	88.936	Mus_pahari
ENSPEMG00000006888	Tarbp1	100	87.964	MGP_SPRETEiJ_G0032846	Tarbp1	100	87.964	Mus_spretus
ENSPEMG00000006888	Tarbp1	82	76.656	ENSMPUG00000002802	TARBP1	99	76.656	Mustela_putorius_furo
ENSPEMG00000006888	Tarbp1	91	72.760	ENSMLUG00000002414	TARBP1	99	72.920	Myotis_lucifugus
ENSPEMG00000006888	Tarbp1	99	77.145	ENSNLEG00000002518	TARBP1	94	76.401	Nomascus_leucogenys
ENSPEMG00000006888	Tarbp1	64	71.734	ENSMEUG00000011370	-	62	71.734	Notamacropus_eugenii
ENSPEMG00000006888	Tarbp1	76	80.560	ENSOPRG00000013822	TARBP1	71	80.560	Ochotona_princeps
ENSPEMG00000006888	Tarbp1	99	74.009	ENSODEG00000005238	TARBP1	99	74.074	Octodon_degus
ENSPEMG00000006888	Tarbp1	92	45.077	ENSONIG00000009789	si:dkey-85a20.4	99	45.077	Oreochromis_niloticus
ENSPEMG00000006888	Tarbp1	99	76.528	ENSOCUG00000017418	TARBP1	96	76.528	Oryctolagus_cuniculus
ENSPEMG00000006888	Tarbp1	92	44.288	ENSORLG00000010529	si:dkey-85a20.4	85	44.358	Oryzias_latipes
ENSPEMG00000006888	Tarbp1	92	44.288	ENSORLG00020019264	si:dkey-85a20.4	85	44.358	Oryzias_latipes_hni
ENSPEMG00000006888	Tarbp1	92	43.966	ENSORLG00015003276	si:dkey-85a20.4	85	44.037	Oryzias_latipes_hsok
ENSPEMG00000006888	Tarbp1	99	74.069	ENSOGAG00000002379	TARBP1	99	74.069	Otolemur_garnettii
ENSPEMG00000006888	Tarbp1	99	73.077	ENSOARG00000003434	TARBP1	99	72.980	Ovis_aries
ENSPEMG00000006888	Tarbp1	90	78.777	ENSPPAG00000028097	TARBP1	99	78.777	Pan_paniscus
ENSPEMG00000006888	Tarbp1	100	69.360	ENSPPRG00000013561	TARBP1	100	69.425	Panthera_pardus
ENSPEMG00000006888	Tarbp1	89	76.357	ENSPTIG00000009281	TARBP1	100	76.357	Panthera_tigris_altaica
ENSPEMG00000006888	Tarbp1	99	77.215	ENSPTRG00000002124	TARBP1	95	76.725	Pan_troglodytes
ENSPEMG00000006888	Tarbp1	99	76.274	ENSPANG00000021933	TARBP1	96	76.237	Papio_anubis
ENSPEMG00000006888	Tarbp1	92	47.201	ENSPKIG00000016716	si:dkey-85a20.4	84	47.201	Paramormyrops_kingsleyae
ENSPEMG00000006888	Tarbp1	85	64.829	ENSPSIG00000010699	TARBP1	99	64.829	Pelodiscus_sinensis
ENSPEMG00000006888	Tarbp1	89	81.633	ENSPCIG00000029710	TARBP1	98	81.633	Phascolarctos_cinereus
ENSPEMG00000006888	Tarbp1	92	44.097	ENSPFOG00000013020	si:dkey-85a20.4	99	44.318	Poecilia_formosa
ENSPEMG00000006888	Tarbp1	92	44.199	ENSPLAG00000006044	si:dkey-85a20.4	85	44.421	Poecilia_latipinna
ENSPEMG00000006888	Tarbp1	92	44.208	ENSPMEG00000017857	si:dkey-85a20.4	85	44.429	Poecilia_mexicana
ENSPEMG00000006888	Tarbp1	92	44.413	ENSPREG00000022753	si:dkey-85a20.4	85	44.634	Poecilia_reticulata
ENSPEMG00000006888	Tarbp1	90	76.386	ENSPPYG00000000102	TARBP1	94	76.386	Pongo_abelii
ENSPEMG00000006888	Tarbp1	83	86.577	ENSPCAG00000004808	TARBP1	79	86.577	Procavia_capensis
ENSPEMG00000006888	Tarbp1	99	73.783	ENSPCOG00000005666	TARBP1	97	73.783	Propithecus_coquereli
ENSPEMG00000006888	Tarbp1	99	63.225	ENSPVAG00000014798	TARBP1	97	63.380	Pteropus_vampyrus
ENSPEMG00000006888	Tarbp1	92	44.975	ENSPNYG00000019135	si:dkey-85a20.4	85	44.975	Pundamilia_nyererei
ENSPEMG00000006888	Tarbp1	99	82.877	ENSRNOG00000053574	Tarbp1	99	82.877	Rattus_norvegicus
ENSPEMG00000006888	Tarbp1	99	69.655	ENSRBIG00000043362	TARBP1	99	69.522	Rhinopithecus_bieti
ENSPEMG00000006888	Tarbp1	99	73.450	ENSRROG00000029527	TARBP1	99	73.773	Rhinopithecus_roxellana
ENSPEMG00000006888	Tarbp1	95	76.492	ENSSBOG00000034503	TARBP1	99	76.492	Saimiri_boliviensis_boliviensis
ENSPEMG00000006888	Tarbp1	89	68.848	ENSSHAG00000000013	TARBP1	99	68.848	Sarcophilus_harrisii
ENSPEMG00000006888	Tarbp1	99	42.391	ENSSFOG00015002660	si:dkey-85a20.4	98	45.622	Scleropages_formosus
ENSPEMG00000006888	Tarbp1	90	45.168	ENSSMAG00000007081	si:dkey-85a20.4	82	45.317	Scophthalmus_maximus
ENSPEMG00000006888	Tarbp1	92	43.875	ENSSDUG00000023566	si:dkey-85a20.4	85	43.875	Seriola_dumerili
ENSPEMG00000006888	Tarbp1	92	44.624	ENSSLDG00000020200	si:dkey-85a20.4	86	44.940	Seriola_lalandi_dorsalis
ENSPEMG00000006888	Tarbp1	87	78.984	ENSSARG00000012207	TARBP1	83	78.984	Sorex_araneus
ENSPEMG00000006888	Tarbp1	99	61.775	ENSSPUG00000015364	TARBP1	95	61.775	Sphenodon_punctatus
ENSPEMG00000006888	Tarbp1	92	44.076	ENSSPAG00000007213	si:dkey-85a20.4	85	44.147	Stegastes_partitus
ENSPEMG00000006888	Tarbp1	100	74.931	ENSSSCG00000010160	TARBP1	98	75.000	Sus_scrofa
ENSPEMG00000006888	Tarbp1	87	63.504	ENSTGUG00000010214	TARBP1	100	63.504	Taeniopygia_guttata
ENSPEMG00000006888	Tarbp1	95	40.507	ENSTNIG00000016586	si:dkey-85a20.4	99	44.307	Tetraodon_nigroviridis
ENSPEMG00000006888	Tarbp1	92	72.387	ENSTTRG00000008707	TARBP1	93	72.387	Tursiops_truncatus
ENSPEMG00000006888	Tarbp1	88	76.975	ENSUMAG00000006730	TARBP1	99	76.975	Ursus_maritimus
ENSPEMG00000006888	Tarbp1	75	89.474	ENSVPAG00000007665	TARBP1	79	89.474	Vicugna_pacos
ENSPEMG00000006888	Tarbp1	91	77.013	ENSVVUG00000007460	TARBP1	99	79.554	Vulpes_vulpes
ENSPEMG00000006888	Tarbp1	90	52.792	ENSXETG00000016224	tarbp1	99	52.792	Xenopus_tropicalis
ENSPEMG00000006888	Tarbp1	84	48.427	ENSXCOG00000011779	si:dkey-85a20.4	93	48.840	Xiphophorus_couchianus
ENSPEMG00000006888	Tarbp1	70	42.549	ENSXMAG00000009600	si:dkey-85a20.4	100	42.697	Xiphophorus_maculatus