EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000007241 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF57.1-like
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Plus strand
Length: 6461 bases
Position: chrKI616373.1:2710-9170
Accession: 102905242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	1	11
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	2	11
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	3	11
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	4	11
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	5	11
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	6	11
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	7	11
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	8	11
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	9	11
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	10	11
ENSPEMP00000004844	zf-C2H2	PF00096.26	1e-68	11	11
ENSPEMP00000004850	zf-C2H2	PF00096.26	3.2e-60	1	10
ENSPEMP00000004850	zf-C2H2	PF00096.26	3.2e-60	2	10
ENSPEMP00000004850	zf-C2H2	PF00096.26	3.2e-60	3	10
ENSPEMP00000004850	zf-C2H2	PF00096.26	3.2e-60	4	10
ENSPEMP00000004850	zf-C2H2	PF00096.26	3.2e-60	5	10
ENSPEMP00000004850	zf-C2H2	PF00096.26	3.2e-60	6	10
ENSPEMP00000004850	zf-C2H2	PF00096.26	3.2e-60	7	10
ENSPEMP00000004850	zf-C2H2	PF00096.26	3.2e-60	8	10
ENSPEMP00000004850	zf-C2H2	PF00096.26	3.2e-60	9	10
ENSPEMP00000004850	zf-C2H2	PF00096.26	3.2e-60	10	10
ENSPEMP00000004850	zf-met	PF12874.7	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000008659	-	1677	XM_015989779	ENSPEMP00000004850	559 (aa)	XP_015845265	-
ENSPEMT00000008649	-	1863	-	ENSPEMP00000004844	620 (aa)	-	-

Gene Model

Click here to download ENSPEMG00000007241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000007241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000007241	-	87	42.553	ENSPEMG00000021923	Zbtb17	60	42.812
ENSPEMG00000007241	-	70	48.980	ENSPEMG00000022706	Sall4	77	37.705
ENSPEMG00000007241	-	99	49.330	ENSPEMG00000000472	Zfp28	84	46.241
ENSPEMG00000007241	-	91	47.059	ENSPEMG00000009113	Zfp628	65	42.254
ENSPEMG00000007241	-	72	33.161	ENSPEMG00000008318	-	91	36.364
ENSPEMG00000007241	-	72	42.708	ENSPEMG00000015523	Zfp423	98	40.580
ENSPEMG00000007241	-	93	53.023	ENSPEMG00000007461	-	90	53.023
ENSPEMG00000007241	-	76	30.970	ENSPEMG00000005321	Patz1	53	32.828
ENSPEMG00000007241	-	96	35.250	ENSPEMG00000015763	Zbtb41	50	31.723
ENSPEMG00000007241	-	98	60.799	ENSPEMG00000008173	-	100	61.567
ENSPEMG00000007241	-	99	46.452	ENSPEMG00000024167	Zfp354a	99	47.368
ENSPEMG00000007241	-	99	57.971	ENSPEMG00000021937	-	97	57.971
ENSPEMG00000007241	-	94	38.847	ENSPEMG00000020736	Zfp672	89	38.304
ENSPEMG00000007241	-	91	46.931	ENSPEMG00000023566	Zfp768	53	46.786
ENSPEMG00000007241	-	80	54.000	ENSPEMG00000008817	-	100	56.325
ENSPEMG00000007241	-	72	38.136	ENSPEMG00000011739	Snai2	66	38.136
ENSPEMG00000007241	-	98	45.966	ENSPEMG00000021548	Zfp712	98	46.058
ENSPEMG00000007241	-	98	58.537	ENSPEMG00000010242	-	96	47.807
ENSPEMG00000007241	-	90	38.378	ENSPEMG00000016745	Zfp319	90	37.815
ENSPEMG00000007241	-	97	48.564	ENSPEMG00000016507	Zfp26	89	48.564
ENSPEMG00000007241	-	98	44.804	ENSPEMG00000000403	-	90	44.804
ENSPEMG00000007241	-	79	30.291	ENSPEMG00000016061	Zfp574	88	35.142
ENSPEMG00000007241	-	98	48.621	ENSPEMG00000000860	Zfp94	97	47.339
ENSPEMG00000007241	-	100	57.414	ENSPEMG00000023329	-	100	58.891
ENSPEMG00000007241	-	97	51.965	ENSPEMG00000014415	Zfp1	100	51.965
ENSPEMG00000007241	-	99	46.875	ENSPEMG00000017339	2610008E11Rik	96	46.875
ENSPEMG00000007241	-	87	38.351	ENSPEMG00000016757	Zfp408	51	38.351
ENSPEMG00000007241	-	80	47.015	ENSPEMG00000022216	-	99	47.015
ENSPEMG00000007241	-	99	65.880	ENSPEMG00000011776	-	100	65.880
ENSPEMG00000007241	-	99	55.396	ENSPEMG00000023883	-	100	53.909
ENSPEMG00000007241	-	97	49.733	ENSPEMG00000022945	-	95	49.733
ENSPEMG00000007241	-	80	42.857	ENSPEMG00000001292	Wt1	67	42.609
ENSPEMG00000007241	-	95	36.028	ENSPEMG00000000870	Repin1	82	36.429
ENSPEMG00000007241	-	98	47.722	ENSPEMG00000018022	-	99	47.722
ENSPEMG00000007241	-	100	50.790	ENSPEMG00000000548	-	99	49.699
ENSPEMG00000007241	-	98	45.423	ENSPEMG00000007595	-	99	45.423
ENSPEMG00000007241	-	97	48.996	ENSPEMG00000023985	Zfp61	100	48.996
ENSPEMG00000007241	-	73	36.296	ENSPEMG00000012225	Snai3	52	36.296
ENSPEMG00000007241	-	74	37.607	ENSPEMG00000007237	Zfp865	85	30.786
ENSPEMG00000007241	-	75	37.589	ENSPEMG00000023302	-	82	37.589
ENSPEMG00000007241	-	99	48.352	ENSPEMG00000009428	Zfp39	92	47.520
ENSPEMG00000007241	-	87	46.637	ENSPEMG00000000610	Mynn	55	46.637
ENSPEMG00000007241	-	80	37.562	ENSPEMG00000014980	Zfp64	70	40.439
ENSPEMG00000007241	-	99	47.009	ENSPEMG00000021570	Zkscan3	61	51.880
ENSPEMG00000007241	-	100	56.627	ENSPEMG00000014281	-	100	77.193
ENSPEMG00000007241	-	73	43.548	ENSPEMG00000015555	BC025920	98	43.548
ENSPEMG00000007241	-	98	42.857	ENSPEMG00000016975	Zfp940	100	40.576
ENSPEMG00000007241	-	73	35.632	ENSPEMG00000018947	Zfp784	67	35.632
ENSPEMG00000007241	-	98	43.023	ENSPEMG00000022834	Zfp709	99	43.023
ENSPEMG00000007241	-	98	45.179	ENSPEMG00000020934	-	100	45.225
ENSPEMG00000007241	-	98	50.187	ENSPEMG00000020749	-	99	50.187

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000007241	-	75	53.886	ENSCING00000018801	zf(c2h2)-138	88	53.886	Ciona_intestinalis
ENSPEMG00000007241	-	96	54.545	ENSCING00000003470	-	94	54.545	Ciona_intestinalis
ENSPEMG00000007241	-	88	50.714	ENSCSAVG00000010156	-	97	50.714	Ciona_savignyi
ENSPEMG00000007241	-	94	46.881	ENSCGRG00001002297	-	99	46.881	Cricetulus_griseus_chok1gshd
ENSPEMG00000007241	-	95	52.022	ENSCGRG00001013602	-	95	48.430	Cricetulus_griseus_chok1gshd
ENSPEMG00000007241	-	98	55.488	ENSCGRG00001007163	-	99	54.878	Cricetulus_griseus_chok1gshd
ENSPEMG00000007241	-	98	59.160	ENSCGRG00000000778	-	97	59.160	Cricetulus_griseus_crigri
ENSPEMG00000007241	-	100	53.786	ENSCGRG00000018332	Zfp53	94	52.561	Cricetulus_griseus_crigri
ENSPEMG00000007241	-	99	49.688	ENSEBUG00000005655	-	96	49.688	Eptatretus_burgeri
ENSPEMG00000007241	-	88	51.139	ENSEBUG00000012823	-	83	53.020	Eptatretus_burgeri
ENSPEMG00000007241	-	96	45.152	ENSEBUG00000001525	-	87	45.152	Eptatretus_burgeri
ENSPEMG00000007241	-	92	51.750	ENSEBUG00000016878	-	98	51.750	Eptatretus_burgeri
ENSPEMG00000007241	-	99	44.357	ENSEBUG00000012454	-	95	42.702	Eptatretus_burgeri
ENSPEMG00000007241	-	93	43.314	ENSEBUG00000008792	-	94	43.681	Eptatretus_burgeri
ENSPEMG00000007241	-	99	57.333	ENSMAUG00000000939	-	97	57.333	Mesocricetus_auratus
ENSPEMG00000007241	-	99	49.301	ENSMAUG00000005974	-	99	47.776	Mesocricetus_auratus
ENSPEMG00000007241	-	99	47.500	ENSMAUG00000004844	-	100	47.500	Mesocricetus_auratus
ENSPEMG00000007241	-	98	63.690	ENSMOCG00000007851	-	99	64.881	Microtus_ochrogaster
ENSPEMG00000007241	-	99	48.596	ENSMOCG00000006946	Zfp53	98	46.854	Microtus_ochrogaster
ENSPEMG00000007241	-	100	45.122	MGP_CAROLIEiJ_G0021132	Zfp948	99	45.540	Mus_caroli
ENSPEMG00000007241	-	99	50.175	ENSMUSG00000062743	Zfp677	99	50.175	Mus_musculus
ENSPEMG00000007241	-	91	49.485	ENSPSIG00000009270	-	93	45.170	Pelodiscus_sinensis
ENSPEMG00000007241	-	98	51.852	ENSRNOG00000052406	LOC102552527	99	51.852	Rattus_norvegicus