EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPEMG00000007877 (Gene tree)
Gene ID: 102921413
Gene Symbol: Trnau1ap
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Peromyscus_maniculatus_bairdii
Status: putative
Strand: Minus strand
Length: 18604 bases
Position: chrKI615381.1:2370931-2389534
Accession: 102921413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPEMP00000005420	RRM_1	PF00076.22	5.7e-27	1	2
ENSPEMP00000005420	RRM_1	PF00076.22	5.7e-27	2	2
ENSPEMP00000005415	RRM_1	PF00076.22	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPEMT00000009438	-	992	XM_006975587	ENSPEMP00000005415	247 (aa)	XP_006975649	UPI00042AC76B
ENSPEMT00000009444	-	1142	XM_006975585	ENSPEMP00000005420	287 (aa)	XP_006975647	UPI00042AB36D

Gene Model

Click here to download ENSPEMG00000007877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPEMG00000007877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPEMG00000007877	Trnau1ap	67	30.693	ENSPEMG00000012565	Pabpc4l	66	32.911
ENSPEMG00000007877	Trnau1ap	75	31.847	ENSPEMG00000011901	Pabpc6	60	31.847
ENSPEMG00000007877	Trnau1ap	62	30.409	ENSPEMG00000000171	Pabpc5	96	30.508
ENSPEMG00000007877	Trnau1ap	59	41.026	ENSPEMG00000017399	-	73	41.026
ENSPEMG00000007877	Trnau1ap	59	41.026	ENSPEMG00000014159	-	73	41.026
ENSPEMG00000007877	Trnau1ap	70	30.198	ENSPEMG00000001090	Tia1	69	31.285

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSG00000180098	TRNAU1AP	100	98.955	Homo_sapiens
ENSPEMG00000007877	Trnau1ap	98	58.086	ENSAPOG00000007148	TRNAU1AP	98	58.086	Acanthochromis_polyacanthus
ENSPEMG00000007877	Trnau1ap	100	97.909	ENSAMEG00000011367	TRNAU1AP	100	97.909	Ailuropoda_melanoleuca
ENSPEMG00000007877	Trnau1ap	91	68.966	ENSACIG00000004161	trnau1apa	93	68.966	Amphilophus_citrinellus
ENSPEMG00000007877	Trnau1ap	98	58.086	ENSAOCG00000008056	trnau1apa	98	58.086	Amphiprion_ocellaris
ENSPEMG00000007877	Trnau1ap	98	58.086	ENSAPEG00000008868	trnau1apa	98	58.249	Amphiprion_percula
ENSPEMG00000007877	Trnau1ap	98	57.878	ENSATEG00000012140	trnau1apa	98	55.949	Anabas_testudineus
ENSPEMG00000007877	Trnau1ap	94	93.333	ENSAPLG00000002606	TRNAU1AP	99	93.333	Anas_platyrhynchos
ENSPEMG00000007877	Trnau1ap	67	52.083	ENSACAG00000004205	-	73	52.083	Anolis_carolinensis
ENSPEMG00000007877	Trnau1ap	99	75.524	ENSACAG00000003995	-	99	75.524	Anolis_carolinensis
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSANAG00000018976	TRNAU1AP	100	98.955	Aotus_nancymaae
ENSPEMG00000007877	Trnau1ap	98	58.667	ENSACLG00000018515	trnau1apa	98	60.067	Astatotilapia_calliptera
ENSPEMG00000007877	Trnau1ap	95	57.401	ENSAMXG00000013750	trnau1apa	90	57.401	Astyanax_mexicanus
ENSPEMG00000007877	Trnau1ap	95	64.444	ENSAMXG00000029240	-	98	64.444	Astyanax_mexicanus
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSBTAG00000010393	TRNAU1AP	100	98.606	Bos_taurus
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSCJAG00000009717	TRNAU1AP	100	98.955	Callithrix_jacchus
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSCAFG00000011735	TRNAU1AP	100	98.606	Canis_familiaris
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSCAFG00020023584	TRNAU1AP	100	98.606	Canis_lupus_dingo
ENSPEMG00000007877	Trnau1ap	100	98.785	ENSCHIG00000023215	TRNAU1AP	100	98.785	Capra_hircus
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSTSYG00000003506	TRNAU1AP	100	98.606	Carlito_syrichta
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSCPOG00000001925	TRNAU1AP	100	98.606	Cavia_porcellus
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSCCAG00000037506	TRNAU1AP	100	98.955	Cebus_capucinus
ENSPEMG00000007877	Trnau1ap	100	98.785	ENSCATG00000044617	TRNAU1AP	100	98.785	Cercocebus_atys
ENSPEMG00000007877	Trnau1ap	100	97.909	ENSCLAG00000008223	TRNAU1AP	100	97.909	Chinchilla_lanigera
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSCSAG00000001014	TRNAU1AP	100	98.606	Chlorocebus_sabaeus
ENSPEMG00000007877	Trnau1ap	95	94.526	ENSCPBG00000000121	TRNAU1AP	100	94.526	Chrysemys_picta_bellii
ENSPEMG00000007877	Trnau1ap	99	44.681	ENSCSAVG00000011781	-	98	44.681	Ciona_savignyi
ENSPEMG00000007877	Trnau1ap	100	87.456	ENSCANG00000041949	TRNAU1AP	100	98.870	Colobus_angolensis_palliatus
ENSPEMG00000007877	Trnau1ap	100	99.652	ENSCGRG00001004713	Trnau1ap	100	99.652	Cricetulus_griseus_chok1gshd
ENSPEMG00000007877	Trnau1ap	100	99.652	ENSCGRG00000014532	Trnau1ap	100	99.652	Cricetulus_griseus_crigri
ENSPEMG00000007877	Trnau1ap	98	58.000	ENSCSEG00000006663	trnau1apa	94	58.197	Cynoglossus_semilaevis
ENSPEMG00000007877	Trnau1ap	97	57.483	ENSCVAG00000018069	trnau1apa	94	58.974	Cyprinodon_variegatus
ENSPEMG00000007877	Trnau1ap	95	53.571	ENSDARG00000101323	trnau1apa	88	51.957	Danio_rerio
ENSPEMG00000007877	Trnau1ap	67	77.083	ENSDNOG00000047959	-	97	77.540	Dasypus_novemcinctus
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSDNOG00000033009	TRNAU1AP	100	98.606	Dasypus_novemcinctus
ENSPEMG00000007877	Trnau1ap	99	91.259	ENSDORG00000006349	Trnau1ap	100	99.567	Dipodomys_ordii
ENSPEMG00000007877	Trnau1ap	96	51.493	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSPEMG00000007877	Trnau1ap	85	93.878	ENSETEG00000012594	TRNAU1AP	100	93.878	Echinops_telfairi
ENSPEMG00000007877	Trnau1ap	55	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSEASG00005010062	TRNAU1AP	100	98.955	Equus_asinus_asinus
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSECAG00000012980	TRNAU1AP	100	98.955	Equus_caballus
ENSPEMG00000007877	Trnau1ap	96	69.474	ENSELUG00000022790	-	94	52.966	Esox_lucius
ENSPEMG00000007877	Trnau1ap	96	62.718	ENSELUG00000017686	trnau1apa	94	62.369	Esox_lucius
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSFCAG00000013401	TRNAU1AP	100	98.955	Felis_catus
ENSPEMG00000007877	Trnau1ap	95	93.796	ENSFALG00000001371	TRNAU1AP	100	93.796	Ficedula_albicollis
ENSPEMG00000007877	Trnau1ap	100	97.909	ENSFDAG00000018599	TRNAU1AP	100	97.909	Fukomys_damarensis
ENSPEMG00000007877	Trnau1ap	79	60.408	ENSFHEG00000018232	trnau1apa	86	56.371	Fundulus_heteroclitus
ENSPEMG00000007877	Trnau1ap	95	53.497	ENSGMOG00000016508	trnau1apa	93	54.577	Gadus_morhua
ENSPEMG00000007877	Trnau1ap	100	93.728	ENSGALG00000001310	-	100	93.728	Gallus_gallus
ENSPEMG00000007877	Trnau1ap	68	49.296	ENSGALG00000012721	C2H6orf52	98	44.015	Gallus_gallus
ENSPEMG00000007877	Trnau1ap	78	57.983	ENSGAFG00000004928	trnau1apa	90	58.824	Gambusia_affinis
ENSPEMG00000007877	Trnau1ap	98	59.932	ENSGACG00000001443	trnau1apa	95	59.589	Gasterosteus_aculeatus
ENSPEMG00000007877	Trnau1ap	95	94.891	ENSGAGG00000004940	TRNAU1AP	100	94.891	Gopherus_agassizii
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSGGOG00000003511	TRNAU1AP	100	98.955	Gorilla_gorilla
ENSPEMG00000007877	Trnau1ap	98	57.705	ENSHBUG00000002510	trnau1apa	98	59.076	Haplochromis_burtoni
ENSPEMG00000007877	Trnau1ap	100	97.561	ENSHGLG00000010380	TRNAU1AP	100	97.561	Heterocephalus_glaber_female
ENSPEMG00000007877	Trnau1ap	100	95.122	ENSHGLG00100012699	TRNAU1AP	100	95.122	Heterocephalus_glaber_male
ENSPEMG00000007877	Trnau1ap	99	57.096	ENSHCOG00000014770	trnau1apa	97	65.714	Hippocampus_comes
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSSTOG00000000079	TRNAU1AP	100	98.955	Ictidomys_tridecemlineatus
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSJJAG00000010128	Trnau1ap	100	98.955	Jaculus_jaculus
ENSPEMG00000007877	Trnau1ap	95	59.862	ENSKMAG00000001230	trnau1apa	93	58.131	Kryptolebias_marmoratus
ENSPEMG00000007877	Trnau1ap	95	60.410	ENSLBEG00000011683	trnau1apa	93	59.524	Labrus_bergylta
ENSPEMG00000007877	Trnau1ap	99	72.632	ENSLACG00000005541	TRNAU1AP	99	72.632	Latimeria_chalumnae
ENSPEMG00000007877	Trnau1ap	99	71.678	ENSLOCG00000004041	trnau1apa	99	70.629	Lepisosteus_oculatus
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSLAFG00000007628	TRNAU1AP	100	98.606	Loxodonta_africana
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSMFAG00000043751	TRNAU1AP	100	98.606	Macaca_fascicularis
ENSPEMG00000007877	Trnau1ap	100	98.785	ENSMMUG00000006561	TRNAU1AP	100	98.785	Macaca_mulatta
ENSPEMG00000007877	Trnau1ap	100	98.785	ENSMNEG00000044201	TRNAU1AP	100	98.785	Macaca_nemestrina
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSMLEG00000015649	TRNAU1AP	100	98.606	Mandrillus_leucophaeus
ENSPEMG00000007877	Trnau1ap	98	58.632	ENSMAMG00000001247	trnau1apa	98	58.478	Mastacembelus_armatus
ENSPEMG00000007877	Trnau1ap	98	58.667	ENSMZEG00005017722	trnau1apa	98	60.067	Maylandia_zebra
ENSPEMG00000007877	Trnau1ap	97	93.525	ENSMGAG00000002105	TRNAU1AP	100	93.525	Meleagris_gallopavo
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSMICG00000008386	TRNAU1AP	100	98.606	Microcebus_murinus
ENSPEMG00000007877	Trnau1ap	100	99.303	ENSMOCG00000011189	Trnau1ap	100	99.303	Microtus_ochrogaster
ENSPEMG00000007877	Trnau1ap	95	57.721	ENSMMOG00000012107	trnau1apa	92	57.721	Mola_mola
ENSPEMG00000007877	Trnau1ap	100	94.774	ENSMODG00000010927	TRNAU1AP	100	94.774	Monodelphis_domestica
ENSPEMG00000007877	Trnau1ap	96	60.751	ENSMALG00000016778	trnau1apa	94	58.020	Monopterus_albus
ENSPEMG00000007877	Trnau1ap	100	98.785	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	98.913	Mus_caroli
ENSPEMG00000007877	Trnau1ap	100	98.785	ENSMUSG00000028898	Trnau1ap	100	98.913	Mus_musculus
ENSPEMG00000007877	Trnau1ap	100	99.190	MGP_PahariEiJ_G0028896	Trnau1ap	100	99.190	Mus_pahari
ENSPEMG00000007877	Trnau1ap	100	98.381	MGP_SPRETEiJ_G0027544	Trnau1ap	100	98.913	Mus_spretus
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSMPUG00000015511	TRNAU1AP	100	98.606	Mustela_putorius_furo
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSMLUG00000012586	TRNAU1AP	100	98.606	Myotis_lucifugus
ENSPEMG00000007877	Trnau1ap	100	97.571	ENSNGAG00000015881	Trnau1ap	100	97.571	Nannospalax_galili
ENSPEMG00000007877	Trnau1ap	99	56.655	ENSNBRG00000001758	trnau1apa	98	56.655	Neolamprologus_brichardi
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSNLEG00000009822	TRNAU1AP	100	98.955	Nomascus_leucogenys
ENSPEMG00000007877	Trnau1ap	97	93.525	ENSMEUG00000006117	TRNAU1AP	100	93.525	Notamacropus_eugenii
ENSPEMG00000007877	Trnau1ap	82	96.364	ENSOPRG00000007084	-	69	96.364	Ochotona_princeps
ENSPEMG00000007877	Trnau1ap	100	98.258	ENSODEG00000002970	TRNAU1AP	100	98.258	Octodon_degus
ENSPEMG00000007877	Trnau1ap	80	59.259	ENSONIG00000004715	trnau1apa	95	59.504	Oreochromis_niloticus
ENSPEMG00000007877	Trnau1ap	99	75.175	ENSOANG00000005325	-	99	75.175	Ornithorhynchus_anatinus
ENSPEMG00000007877	Trnau1ap	100	96.864	ENSOCUG00000011704	-	100	96.864	Oryctolagus_cuniculus
ENSPEMG00000007877	Trnau1ap	100	76.736	ENSOCUG00000002353	-	100	76.736	Oryctolagus_cuniculus
ENSPEMG00000007877	Trnau1ap	89	76.562	ENSOCUG00000006834	-	100	74.609	Oryctolagus_cuniculus
ENSPEMG00000007877	Trnau1ap	98	58.511	ENSORLG00000010428	trnau1apa	95	56.690	Oryzias_latipes
ENSPEMG00000007877	Trnau1ap	98	57.679	ENSORLG00020000926	trnau1ap	95	56.507	Oryzias_latipes_hni
ENSPEMG00000007877	Trnau1ap	98	57.679	ENSORLG00015009858	trnau1ap	95	56.507	Oryzias_latipes_hsok
ENSPEMG00000007877	Trnau1ap	98	58.703	ENSOMEG00000007873	trnau1apa	95	55.822	Oryzias_melastigma
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSOGAG00000002274	TRNAU1AP	100	98.606	Otolemur_garnettii
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSOARG00000002843	TRNAU1AP	100	98.606	Ovis_aries
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSPPAG00000033927	TRNAU1AP	100	98.955	Pan_paniscus
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSPPRG00000004416	TRNAU1AP	100	98.955	Panthera_pardus
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSPTIG00000016677	TRNAU1AP	100	98.955	Panthera_tigris_altaica
ENSPEMG00000007877	Trnau1ap	93	80.074	ENSPTRG00000000434	-	97	78.598	Pan_troglodytes
ENSPEMG00000007877	Trnau1ap	100	98.785	ENSPANG00000016019	TRNAU1AP	100	98.785	Papio_anubis
ENSPEMG00000007877	Trnau1ap	94	73.404	ENSPKIG00000022205	-	93	76.404	Paramormyrops_kingsleyae
ENSPEMG00000007877	Trnau1ap	95	59.364	ENSPKIG00000015511	trnau1apa	92	57.597	Paramormyrops_kingsleyae
ENSPEMG00000007877	Trnau1ap	95	94.891	ENSPSIG00000006864	TRNAU1AP	100	94.891	Pelodiscus_sinensis
ENSPEMG00000007877	Trnau1ap	94	61.765	ENSPMGG00000023893	trnau1apa	91	60.517	Periophthalmus_magnuspinnatus
ENSPEMG00000007877	Trnau1ap	78	60.987	ENSPMAG00000005934	trnau1apa	96	60.185	Petromyzon_marinus
ENSPEMG00000007877	Trnau1ap	60	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSPEMG00000007877	Trnau1ap	95	56.597	ENSPFOG00000008100	trnau1apa	93	57.292	Poecilia_formosa
ENSPEMG00000007877	Trnau1ap	91	56.318	ENSPLAG00000010236	trnau1apa	93	57.040	Poecilia_latipinna
ENSPEMG00000007877	Trnau1ap	96	55.517	ENSPMEG00000016387	trnau1apa	92	56.207	Poecilia_mexicana
ENSPEMG00000007877	Trnau1ap	93	53.532	ENSPREG00000019821	trnau1apa	86	63.095	Poecilia_reticulata
ENSPEMG00000007877	Trnau1ap	100	89.879	ENSPPYG00000001639	-	100	89.879	Pongo_abelii
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSPCOG00000027712	-	100	98.606	Propithecus_coquereli
ENSPEMG00000007877	Trnau1ap	98	94.215	ENSPCOG00000023470	-	100	94.215	Propithecus_coquereli
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSPVAG00000017214	TRNAU1AP	100	98.955	Pteropus_vampyrus
ENSPEMG00000007877	Trnau1ap	98	57.705	ENSPNYG00000010130	trnau1apa	98	59.289	Pundamilia_nyererei
ENSPEMG00000007877	Trnau1ap	99	53.020	ENSPNAG00000024905	trnau1apa	95	52.218	Pygocentrus_nattereri
ENSPEMG00000007877	Trnau1ap	94	90.406	ENSRNOG00000055344	Trnau1ap	92	90.406	Rattus_norvegicus
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSRBIG00000029083	TRNAU1AP	100	98.955	Rhinopithecus_bieti
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSRROG00000029128	TRNAU1AP	100	98.955	Rhinopithecus_roxellana
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSSBOG00000021299	TRNAU1AP	100	98.955	Saimiri_boliviensis_boliviensis
ENSPEMG00000007877	Trnau1ap	100	94.077	ENSSHAG00000008108	TRNAU1AP	100	94.077	Sarcophilus_harrisii
ENSPEMG00000007877	Trnau1ap	98	53.398	ENSSMAG00000020851	trnau1apa	98	56.721	Scophthalmus_maximus
ENSPEMG00000007877	Trnau1ap	85	70.370	ENSSDUG00000011734	trnau1apa	94	57.143	Seriola_dumerili
ENSPEMG00000007877	Trnau1ap	95	60.426	ENSSLDG00000012101	trnau1apa	92	60.426	Seriola_lalandi_dorsalis
ENSPEMG00000007877	Trnau1ap	97	97.842	ENSSARG00000007536	TRNAU1AP	100	97.842	Sorex_araneus
ENSPEMG00000007877	Trnau1ap	61	81.818	ENSSPUG00000010415	-	100	81.818	Sphenodon_punctatus
ENSPEMG00000007877	Trnau1ap	99	85.664	ENSSPUG00000010400	-	100	85.664	Sphenodon_punctatus
ENSPEMG00000007877	Trnau1ap	98	58.361	ENSSPAG00000005029	trnau1apa	98	57.655	Stegastes_partitus
ENSPEMG00000007877	Trnau1ap	100	98.955	ENSSSCG00000030284	TRNAU1AP	100	98.955	Sus_scrofa
ENSPEMG00000007877	Trnau1ap	68	53.061	ENSTGUG00000005908	-	100	53.061	Taeniopygia_guttata
ENSPEMG00000007877	Trnau1ap	97	94.245	ENSTGUG00000000735	-	100	94.245	Taeniopygia_guttata
ENSPEMG00000007877	Trnau1ap	98	58.472	ENSTRUG00000003352	trnau1apa	98	71.111	Takifugu_rubripes
ENSPEMG00000007877	Trnau1ap	99	56.209	ENSTNIG00000006129	trnau1apa	98	56.436	Tetraodon_nigroviridis
ENSPEMG00000007877	Trnau1ap	85	86.939	ENSTBEG00000008049	-	100	86.939	Tupaia_belangeri
ENSPEMG00000007877	Trnau1ap	100	98.606	ENSTTRG00000001854	TRNAU1AP	100	98.606	Tursiops_truncatus
ENSPEMG00000007877	Trnau1ap	95	98.540	ENSUAMG00000008789	TRNAU1AP	100	98.540	Ursus_americanus
ENSPEMG00000007877	Trnau1ap	100	98.258	ENSUMAG00000011068	TRNAU1AP	100	98.258	Ursus_maritimus
ENSPEMG00000007877	Trnau1ap	100	88.014	ENSVPAG00000006778	TRNAU1AP	100	88.014	Vicugna_pacos
ENSPEMG00000007877	Trnau1ap	99	96.831	ENSVVUG00000012518	TRNAU1AP	93	96.831	Vulpes_vulpes
ENSPEMG00000007877	Trnau1ap	95	55.556	ENSXMAG00000017361	trnau1apa	93	57.292	Xiphophorus_maculatus